Lhae003896.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Liopterus haemorrhoidalis
Gene Symbol
tfip11
Assembly
GCA_963971575.1
Location
OZ020611.1:57499103-57535572[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9e-96 1.4e-91 308.9 10.5 1 275 402 673 402 673 0.97
2 2 0.22 1.5e+04 -2.9 0.0 158 188 686 715 679 721 0.54

Sequence Information

Coding Sequence
ATGTCGGACGACGAAgtagaaaaatttgaaattacagACTATGACTTGGAAAATGAGTTTAATATGTTTAGACCTCGAAGAAACTTATCAAAAAATCAACAGATATACGgTATTTGGGCTGACGATAGTGATCATGAAGAGAGACAAAGTTCATCTAGACAAACACGTAAACCAAAAGATTACTCAGCACCGATTGGCTTCGTTGCAGGTGGTGTTCAACAAGCTGGTAAAAAGAAAGatcaaattgtaaaaaaagaagaaaaatctgACAATGAAGATGAAGAAGattCGTATAAGAGAATCAAGAATAGTTCAAGTGAATCAGACAGTGATGGCCCTTCAACGAGAGCTGGATTCGGTCGTCAAAAGCAGTCTAACATAACGGAAATCACAGGAGATATTGCAGGTCTTCGAAAGAAGAATCGTGCACCTCTTAACCCAACAATGATAAAACAAGGAGTTGGCCAATGGGAGAAGCACACTAAGGGAATAGGAGCCAAGCTGCTGCTTCAAATGGGTTACCAGCCTGGTAAAGGCTTGGGTAAAGATTTGCAAGGTATATCGGCTCCAGTTGAAGCTCATGTACGCAAGGGCCGAGGGGCTGTTGGTGCCTATGGCCCTGAAAAAGCAGCTAAAGTGGCAGAACTTAAGGGTCTAAAATCTCAGAAAGATGGTATTACTGAAggtgattttgaaatagaaaatgAGAAAGTAAAATGGAAGAAAGGAGACATATCCGCTAAAAAGAAAACGAGATATTACTATCGGAGTGTTGATGATGTTATTGAGAGAGGCAAAAGACCAGGGGCACTTAGAAATTCCTCAGCCGTcagCGAGCTAAGTAAAGTAAAAGTAATCGATATGACAGGGCCGCAGCAAAGAGTACTTAGCGGATATCATGCTCTGAGTGGCCCTAAAGCTCCTCCAGGAGTGGAACTATATGAAGATGTTGTTCACAAACAATGTGCTAACTTTACTTTACCAGAAATACAGCACAACCTAGACTTGTTAGTCGACATGTGTGAACAGGATATTATATTATGCGATAGAAATTCGAGATATTGCCAGGATCGTATTATTGCTTTGAACCAAGAAGAAGGAACCTTAAAAGCAACATTAAAGAAGGAAAATGAATATATAGATAGTCTTGCGAGTGTTTTAGATATTGTGGATAAAATAATGGACCAGACGCAAGGATTATCTTTAGGACAAGTTGCACATGCGTTTAAAGAATTGCAGgaTAATCATTATGAAGAATATACTATGTATGAATTAGGAGAACTAGCACCTGGTTTAGTAGGCCCTCTGGTGACATCTGCTTTAGCTAGTTGGTCACCTCTAACAGCTCCTACACAATGTTTGGATATATTTACGgaatggaaaaatattttagatcgACCAACTAAGAGAGGAACTTTGGAAATTAACAGTGGACAGATTCAACCGTACGATAGCTTATTGTGGAACACATGGGTACCGGTTATTAGATCAACAGTATCAACGTGGAGTCCTCGAGACTGTGATCCACTTATTGAGCTACTAGAGACATGGATGCCTATACTGCCACCATGGATTTTGGACAACGTTATTGACCAACTCGTGCTGCCACGTCTGACCAATGAAGTAACTCTCTGGAATCCACTTACTGACACAATACCCATTCACGTGTGGATTCATCCATGGATTCCTCTGTTAGgTACCAGGATACATTCGCATATATTCCCATTAATTCAAGACAAATTAGGAACCGCTTTAGCAAACTGGCATCCATCTGATAGATCAgctaaattgatattaaatccATGGAAACCGGCTCTGCCGGAAGGAGTTTTCGCAGCATTTTTACATAAGCACATTGTACCAAAACTACATATTTGCATGCAATCATTGGTTATTAATCCACATCAGCAACATTTAGATGCATGGAACTGGGTGATGGATTGGACTGATCTTCTCTCCGTACAAACAATGACAGCAATATTAGATAAATGCTTCTTCCCTCGATGGTTACAAACTTTAGCCCTGTGGTTAAATCATAATCCAAACTATGCACAAGTCACTGAGTGGTATTCAGGTTGGAAAAGAATGCTTTCAGAACCTCTACTTCTTCAGCCAACTATTAaagATCATTTCCATAAAGCTTTGGAAATAATGAACAGAGCAGTGAGTTCAGGACAGCAACCTGGAGCAATGGAATCTGTGTCGTACCTTAAAAACATGGAAAGTATTCCACCGCCGCCTCCTTCGCCAAGAATAGAGGCAATGGCTGAAACACTACGTACTGCTTCCTTAATTCCACAAGGTTTCAAGGATCTTATTGCTAAGAGGTGTGAAGAACGAGGCATTTTGTTTGTGCCTATAAACAACAGATTTCATGAAGCAAAACAAGTGTACCGGATTGGTAATAATACTCAATGCTATATTGACAGaaatgtagtttttgtaagTCAAAATGGTTCCAGTTTTATGCCAACATCGTTGTCTAAATTATTAGATattgcttcataa
Protein Sequence
MSDDEVEKFEITDYDLENEFNMFRPRRNLSKNQQIYGIWADDSDHEERQSSSRQTRKPKDYSAPIGFVAGGVQQAGKKKDQIVKKEEKSDNEDEEDSYKRIKNSSSESDSDGPSTRAGFGRQKQSNITEITGDIAGLRKKNRAPLNPTMIKQGVGQWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEAHVRKGRGAVGAYGPEKAAKVAELKGLKSQKDGITEGDFEIENEKVKWKKGDISAKKKTRYYYRSVDDVIERGKRPGALRNSSAVSELSKVKVIDMTGPQQRVLSGYHALSGPKAPPGVELYEDVVHKQCANFTLPEIQHNLDLLVDMCEQDIILCDRNSRYCQDRIIALNQEEGTLKATLKKENEYIDSLASVLDIVDKIMDQTQGLSLGQVAHAFKELQDNHYEEYTMYELGELAPGLVGPLVTSALASWSPLTAPTQCLDIFTEWKNILDRPTKRGTLEINSGQIQPYDSLLWNTWVPVIRSTVSTWSPRDCDPLIELLETWMPILPPWILDNVIDQLVLPRLTNEVTLWNPLTDTIPIHVWIHPWIPLLGTRIHSHIFPLIQDKLGTALANWHPSDRSAKLILNPWKPALPEGVFAAFLHKHIVPKLHICMQSLVINPHQQHLDAWNWVMDWTDLLSVQTMTAILDKCFFPRWLQTLALWLNHNPNYAQVTEWYSGWKRMLSEPLLLQPTIKDHFHKALEIMNRAVSSGQQPGAMESVSYLKNMESIPPPPPSPRIEAMAETLRTASLIPQGFKDLIAKRCEERGILFVPINNRFHEAKQVYRIGNNTQCYIDRNVVFVSQNGSSFMPTSLSKLLDIAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-