Lhae052941.1
Basic Information
- Insect
- Liopterus haemorrhoidalis
- Gene Symbol
- -
- Assembly
- GCA_963971575.1
- Location
- OZ020622.1:15192513-15194408[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-11 1.4e-08 36.2 0.0 1 42 17 59 17 62 0.87
Sequence Information
- Coding Sequence
- ATGCCTAACCAATACCAACGGAAGGCGGCTGCAGGACGAGGTGCCTGGAGcgaagaagatttaaaaaatgctaTGGCAGAAGTACAAAGTGGAGGGATGACGGTTTATAGGGCCTCTATTATCTACCATATTCCAAGAAAAACACTAGAAAGAAGGTTAAAACAAAACAACTACACAAAGGGACCTATGGGACCATCATCAACCTTTGGTGCAGACAACGAAAAAAGACTGAGCAAGCATATAAAAGACATGCAGTCGAGAGGCTTTCCATTGACTATCGATGATTTAAGAAGAATTTCATTCAAGTATGCTGAGCAATTAGGAATTAAACACAGATTCAATATGAAATCTGAGAAGGCGGGCTATGATTGGGtgcaaatgtttttgaaaaggaATTCCGATATTTCATTAAGGAAATCAGAAGGGGTGTCATATGCTAGAAGTCAAGGGATGAATAAAGCAGAAGTAAACGCCTATTTTGAAATGCTTGAGAGGACACTCAGTGATAATGACTTAATAAATAAACCTGGCCATATTTACAACATGGACGAGTCTGGGTTGCAATTGAATAATCGACCAGGCCATGTTTTGGCTGAAAAAGGTCTAAAAGGTTCTAAAGCTGTAGCTATTGCAACGTCTACAGAAAAAGGAGAAACGATCACGGTAATTGGTTGCTGCAATGCTGAAGGTAATTTTATGCCTCCTGCATGCATTATGAAAGGGCAAAGGAAGAAACCTGAATTTGAAGATGGACTGCCTCCAGGTTCAGTGATTTATATGTCACAAAAATCCGCCTATATAACCTCTGACATATTTCTAGAATGGATGAAATCGCATTTCTTGCCTCGAAAACCAAATGGCAAAGTGCTTCTTTTGCTGGACGGTCATTCTACACACTgcaattcagttaaaatgttgGAGTTTGCTAATGATAATGACATCATCTTACTGTCGATGCCATCACACACATCCCACTATCTACAGCCGCTGGATGTTGCTGTTTTCAAGTCTCTTAAAACTTTCTTCTATGAATCCTGCAGGTTATGGATGAAACAGCACCCTGGACGCCGTCTAAcaagacaacaatttggtttctTATTAAACCAAGCCTGGGGAAAATCAGCgacaagtggaaatgcaatatCAGGATTCAGGGCAGCAGGAGTTTTCCCACTAAATCCAGGAGCCATTCCGGAGTACGCCTTTAGTGAGAACATTGAGCAACCTATTGAAAGAAACATCGGACATGCAGCGCAGGTCCAATCAGTTTCAGATTCAGGCCCAAGTACATCCTTTCAGACGGTGGACCAACCAACACCGACTAGATTACTGAACGAAGTATCTCCACTGCCTGTAAAACTAAACGAGGTTCGGAAACGAGCCAAACAAGTAAGCATTCTTTTGACATCTGAAGAGCATATTGAAAAAcgaaaaatgaaagaaaatgaaaaagaaaaaaaggaagaaaagtcaaaaaaaccaaaaataataaaaacggtAACTAAGACTGATAGacctaagaaaaaaaatactgttaagAAACGAAAGGCAATTCGTAGGTTGTCTGATAGCAGTTGCGAAAAAATTCCCATCGTTTTCAATGATACCTCTGAAAGTGAATCTGAAGATAGAGAGACAGATAACTGCACAGGTTGTGGTGATAATTATTACAGGACACAATTAGCTGAAGATTGGATACGATGCAATATTTGCATGCTCTGGGTGCACGAAAATTGCACCGAGTTTGCGGACATGTGTTCTTATTGcggaaataagaataaaaaggaGTTAAAAGATCACAAGGGCAAAGGGAAAGGCAAAAAAAGTACTGGCCATCTCCCCCCGACCACTATGGCCATCACCCCCGGACACTCTGGGAGAGATGGCCagtcctag
- Protein Sequence
- MPNQYQRKAAAGRGAWSEEDLKNAMAEVQSGGMTVYRASIIYHIPRKTLERRLKQNNYTKGPMGPSSTFGADNEKRLSKHIKDMQSRGFPLTIDDLRRISFKYAEQLGIKHRFNMKSEKAGYDWVQMFLKRNSDISLRKSEGVSYARSQGMNKAEVNAYFEMLERTLSDNDLINKPGHIYNMDESGLQLNNRPGHVLAEKGLKGSKAVAIATSTEKGETITVIGCCNAEGNFMPPACIMKGQRKKPEFEDGLPPGSVIYMSQKSAYITSDIFLEWMKSHFLPRKPNGKVLLLLDGHSTHCNSVKMLEFANDNDIILLSMPSHTSHYLQPLDVAVFKSLKTFFYESCRLWMKQHPGRRLTRQQFGFLLNQAWGKSATSGNAISGFRAAGVFPLNPGAIPEYAFSENIEQPIERNIGHAAQVQSVSDSGPSTSFQTVDQPTPTRLLNEVSPLPVKLNEVRKRAKQVSILLTSEEHIEKRKMKENEKEKKEEKSKKPKIIKTVTKTDRPKKKNTVKKRKAIRRLSDSSCEKIPIVFNDTSESESEDRETDNCTGCGDNYYRTQLAEDWIRCNICMLWVHENCTEFADMCSYCGNKNKKELKDHKGKGKGKKSTGHLPPTTMAITPGHSGRDGQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01090689; iTF_00717668; iTF_01342924; iTF_01342925; iTF_01342926; iTF_00924568; iTF_00902974; iTF_00147264; iTF_00913536; iTF_00913537; iTF_00147273; iTF_00023662;
- 90% Identity
- iTF_00902974;
- 80% Identity
- -