Eruf002377.1
Basic Information
- Insect
- Eutolmus rufibarbis
- Gene Symbol
- -
- Assembly
- GCA_963920795.1
- Location
- OY987204.1:18640490-18642376[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-11 8.5e-09 36.1 0.0 1 42 17 59 17 62 0.87
Sequence Information
- Coding Sequence
- ATGCCGAATGAATACTTACGGAAAGCCGCTACTGGACGAGGTGCCTGGAGcgaagaaaacttaaaaaacgcTATGGCAGAAGTACAAAGTGGTGGGATGACGATTTATAGGGCCTCTTCTGTCTATCATATTCCAAGAAAAACACTAGAAAGAAGGttgaaacaaaacaattacacAAAAGGACCTATGGGACCATCGTCAACCTTTGGTgcagaaaacgaaaaaaggcTGAGCAAGCATATAAAAGACATGCAGTTGAGAGGCTTTCCATTGACTATTGATGATTTAAGAACAATTTCATTCAAGTTTGCTGAGCAATTAGGAATTAAACACAGACTCAATATAGAATCTGAGAAGGCGGGCTATGATTGGGtgcatatgtttttaaaaaggaattcCGATATTTCATTAAGGAAATCAGAAGGGGTGTCATATGCTAGAAGTCAAGGGATGAATAAAGCAGAAGTTAACGCCTATTTTGAAATGCTTGAGAGGATTCTCAGTGATAATGACCTAATAAATAAACCTGGCCATATGTACAATATGGACGAGTCTGGGTTGCAACTAAATAATAGACCAGGTCACGTTTTGGCTGAAAAAGCTTCCAAAGCTGTAGCTATGTCAACGTCTACAGAAAAAGGAGAAACGATCACGGTAATTGGTTGCTGCAATGCTGAAGGTAATTTTATGCCTCCTGCTTGCATTATGAAAGGGCAAAGGAAGAAACCTGAATTTGAAGATGGGCTTCCTCCAGGTTCAGTGGTTTATATGTCACAAAAATCCGCCTATATAACCTCTGACATATTTCTAGAATGGttgaaaacacattttttgcCTCGAAAACCAGATGGTAAAGTGCTTCTTTTACTGGACGGTCATTCTACACACTGCAATTCAGTTAAAATGCTGGAGTTTGCGAATGATAATGACATTATCTTACTGTCGATGCCATCACATACATCCCACTATCTACAGCCGCTGGATGTTGCTGTTTTCAAGtcgcttaaaattttcttctatgaATCCTGCAGGTTGTGGATAAAACAGCACCCTGGACGCCGTCTTACAAGACAACAATTTGGCTTCTTACTACGCCAAGCCTGGGGAAAATCAGCGACAAGTGGAAATGCAATATCAGGATTCAGGGCAGCAGGGGTTTTCCCACTAAATCCAGGGGCCATTCCGGAGTACGCTTTTAGTGGGAACATTGGGCAACCTATTGAAAGTAATATCGCACATGCAGCGCAGGCCCAATCAGTTTCAGATTCAGGCCCAAGTACACCCTTTCAGACGTTAGAGCAACGAACACCGACTGAATTACTGCAAGAAGTATCTCCACTGCCTGTAAAACTAAACGAGGTCCGGAAACGAGCTGAACAAGTAAGCATTCTTTTGACATCTGAAGAGCatattgaaaaacgaaaaatgaaaggaaatgaaaaagaaaaaagggaaGAGAAGtcgaaaaaactaaaaataataaaaacggaAACTAAGACTGataaacttaagaaaaaagaTACTGTTAAGAAACGAAAGGCAATTCGTAGGCTGTCTGATAGCAGTTGCGAAGAAATTCCCATCGTTTACAATGATACCTCTGAAAGTGAATCTGAAGATAGAGAGAAAGATAACTGCAGAGGTTGTGGTGATAATTATTATCGGACAAAATTAGCTGAAGATTGGATACAATGCAATATTTGCATGCTATGGGTGCACGAAAATTGCACCGAGTTTGATAACATGTGTTCTCAGTGCggtaataagaaaaaaaaggagttAAAAGATCTCAAGGGTAAaggaaaaggtaaaaaaagtACTGGCCATCTCCCCCCGACCACTATGGCCATCACCGCCGGGCACTCTGTGAGAGATGGCCAGTCctag
- Protein Sequence
- MPNEYLRKAATGRGAWSEENLKNAMAEVQSGGMTIYRASSVYHIPRKTLERRLKQNNYTKGPMGPSSTFGAENEKRLSKHIKDMQLRGFPLTIDDLRTISFKFAEQLGIKHRLNIESEKAGYDWVHMFLKRNSDISLRKSEGVSYARSQGMNKAEVNAYFEMLERILSDNDLINKPGHMYNMDESGLQLNNRPGHVLAEKASKAVAMSTSTEKGETITVIGCCNAEGNFMPPACIMKGQRKKPEFEDGLPPGSVVYMSQKSAYITSDIFLEWLKTHFLPRKPDGKVLLLLDGHSTHCNSVKMLEFANDNDIILLSMPSHTSHYLQPLDVAVFKSLKIFFYESCRLWIKQHPGRRLTRQQFGFLLRQAWGKSATSGNAISGFRAAGVFPLNPGAIPEYAFSGNIGQPIESNIAHAAQAQSVSDSGPSTPFQTLEQRTPTELLQEVSPLPVKLNEVRKRAEQVSILLTSEEHIEKRKMKGNEKEKREEKSKKLKIIKTETKTDKLKKKDTVKKRKAIRRLSDSSCEEIPIVYNDTSESESEDREKDNCRGCGDNYYRTKLAEDWIQCNICMLWVHENCTEFDNMCSQCGNKKKKELKDLKGKGKGKKSTGHLPPTTMAITAGHSVRDGQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00902975;
- 90% Identity
- iTF_00902974;
- 80% Identity
- -