Lnew018765.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Liometoxenus newtonarum
Gene Symbol
Hr39
Assembly
GCA_030264535.1
Location
JARJEB010030063.1:4856-8392[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 1.2 1.3e+04 -4.5 4.6 97 98 90 113 22 200 0.36
2 5 2 2.3e+04 -7.8 12.7 52 162 152 249 126 308 0.37
3 5 2.7e-08 0.0003 20.7 0.0 1 24 415 438 415 453 0.88
4 5 0.024 2.8e+02 1.0 0.0 77 114 469 506 436 519 0.73
5 5 3.4e-73 3.9e-69 234.4 0.1 205 408 549 747 526 747 0.95

Sequence Information

Coding Sequence
ATGGCTGCGGACATGCGATCGCCGAACGTGTCCGTGACGCCAATCAACATTGAGCCGCCGTATCCACCACCTCCAGGTCCAACAACTGCCACAAACATATCCGACGATGCATCCATACATCATCACCATACCCATAATCAcaaccatcatcatcatcaccatAATCATCACCAGCAGCATCACATCAACGGAGAACCGTTGGACAGTTCCGACGCCGAAGTCGCTCAAATCGATTTCCAATCCAGCGTCAATATGAGACACAAAAACAAACGCGATCGAGGCGATGATGGTGGCAGTGATATAGTGCCGCGACCCATGTCCTGGGAAGGTGAACTCTCCGATGGGGAGCGGGATATGAGTATCGACGATGAGAATGGCCATGTACCTGAAAACTTGTCAATGCAACCAAATCAAGCCGCTCATGATCGTCATGGACAGACTTCTGTATCAGCAACGCTCAATGATTCGAAAGAGAGTCCCATCATGAAACTGAAGCAAGCGCCGACGAATTATTCGCTGCATTCGACGCCTAGCAATTCGCCATTGTTATCGCAGCGGCATCCGTTGCCGATGCTTCCCAAGGATCTTGTACACAAAGCGCTAAATGTGCCACCAACGCCTAGCCCAGACTCTGCTGTGCATTCTGCGTATAGCGTCTTTTCATCGCCAACGCAAAGTCCACTGACTCAACGACACGTTACACTAACACCGAATTTAAGTCGAAATAATAGTGATGCGTCGCATTCGAGTTGTTGCTCGTATTCCAGTGTTTCGGTGTCCGTTTCACCAACGCAACAATTTTCGCCGACGCATAGTCCAATCCAGGGTAGGCATATGCCAAATATCCATGGTAGTCCGCTACATCACAATGTCCTCTACAGAAGCCTGCAGGAAGACTCGAACACTCAATTCACGACGAGTTCCGAGCATGACAACCTCTTGGATGATAATCTCGGTGAAGATAAGACCGGATTAATGCATACGTCACTTCCGGCCCAGCCAGGGATATCACGGCAACAGCTTATCAACAGTCCATGTCCAATTTGCGGTGATAAAATCTCCGGTTTTCACTACGGCATCTTCAGCTGTGAGTCGTGTAAGGGTTTCTTCAAACGAACGGTGCAAAACCGAAAGAACTATGTGTGTCTTCGCGGCGCTGTGTGCCCCGTAACGGTAGCCACGCGTAAGAAGTGTCCTGCCTGTCGTTTCGAAAAGTGTTTGCAATGCGGCATGAAGTTGGAGGCAATACGCGAAGATCGGACACGCGGTGGACGCTCTACGTATCAGTGTTCGTACTCGTTGCCGCCATCGTTGACTAATCATCCCGAATTACGTGCCAGTTCCAGTGATCTAAGGCagggtggtggtggtggtggtatGGATGGAACGCATTTGGGTGGATTTAGTGTTAAGGTTGAGCCATCCGAATCACAATCGCATGGGAAAAAGATGAGTTCACGACATGGTGTCCCGGCATTATTGCAAgaAATAATGGACGTGGAACATTTATGGCATTACAACGAACTGGAACTCAACAAATTGAACACGGAAGGAAGTCTAGGCCGTGAAGGTGGTAGCGGTGCTGTTCATAACCTATCAATGCATCCCCTACTGGCAGGCACTGCATTGGCCGGTTCGACAGACACGAATCCGGATTTTGTTGCTAATTTGTGCAATATCGCCGATCATCGTTTGTATAAAATTGTCAAATGGTGCAAAAGCTTGCCGTTATTTAAAAACATATCCATTGACGATCAAATTTGTCTGTTAATAAATTCATGGTGcgaattgttattgttttcgtGCTGTTTCCGATCGATGTCGACCCCGGGTGAGATTCGCGTATCGTTGGGCAAGAGCATCACGTCGGCACAGGCTAGGGATTTGGGTATGCAGGCATGCATCGAACGAATGCTCAATTTCACTGAACAATTGCGACGATTGCGAGTCGACAGATACGAATATGTTGCCATGAAAGTTATAGTATTATTAACTTCAGATACGTCTGAATTAAGAGAGGCTGAAAAGGTGCGAGCGTCACAAGAAAAGGCGTTGAAAGCACTTCAAGACTACACGTTAACGCATTATCCTGATAGTCCTGCGAAATTTGGCGAACTGCTACTGCGAATACCCGAATTACAACGCACATGTCAGGTGGGCAAAGAAATGTTAACTATAAAATCTAAAGACGGTGAAGGACCAAGCTTTAATCTACTTATGGAACTATTACGTGGTGATCATTGA
Protein Sequence
MAADMRSPNVSVTPINIEPPYPPPPGPTTATNISDDASIHHHHTHNHNHHHHHHNHHQQHHINGEPLDSSDAEVAQIDFQSSVNMRHKNKRDRGDDGGSDIVPRPMSWEGELSDGERDMSIDDENGHVPENLSMQPNQAAHDRHGQTSVSATLNDSKESPIMKLKQAPTNYSLHSTPSNSPLLSQRHPLPMLPKDLVHKALNVPPTPSPDSAVHSAYSVFSSPTQSPLTQRHVTLTPNLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPIQGRHMPNIHGSPLHHNVLYRSLQEDSNTQFTTSSEHDNLLDDNLGEDKTGLMHTSLPAQPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAVCPVTVATRKKCPACRFEKCLQCGMKLEAIREDRTRGGRSTYQCSYSLPPSLTNHPELRASSSDLRQGGGGGGMDGTHLGGFSVKVEPSESQSHGKKMSSRHGVPALLQEIMDVEHLWHYNELELNKLNTEGSLGREGGSGAVHNLSMHPLLAGTALAGSTDTNPDFVANLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITSAQARDLGMQACIERMLNFTEQLRRLRVDRYEYVAMKVIVLLTSDTSELREAEKVRASQEKALKALQDYTLTHYPDSPAKFGELLLRIPELQRTCQVGKEMLTIKSKDGEGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00629851;
90% Identity
iTF_00902274;
80% Identity
iTF_00902274;