Basic Information

Gene Symbol
lilli
Assembly
GCA_030264535.1
Location
JARJEB010009125.1:1-14289[+]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.11 2.6e+03 -2.4 0.0 44 67 7 30 4 35 0.85
2 8 5.8e-12 1.3e-07 31.6 25.5 341 489 172 328 94 344 0.61
3 8 0.1 2.3e+03 -2.2 14.9 101 250 332 481 326 500 0.48
4 8 1 2.3e+04 -21.7 33.9 84 247 470 635 453 641 0.43
5 8 0.43 9.9e+03 -4.3 14.6 435 499 588 653 580 662 0.59
6 8 0.51 1.2e+04 -4.5 17.5 391 492 641 757 635 762 0.57
7 8 1 2.3e+04 -12.4 21.5 439 492 703 757 693 809 0.49
8 8 0.00043 9.9 5.6 14.1 55 250 855 1066 849 1089 0.48

Sequence Information

Coding Sequence
GTGAATCCATCCTCCGCTGACCGGGTAACTCAAGAAATCCAGTCAAAGTTGGGCGACTTCCAAAAAGTCAAACTTTATCTGGACAGCAAGCAACTTATCGCCCCGGATGGTGGAGGTGGAGGAGCCGGTGGTGGTAGTGGTAGTAGTAGTACCGGCACAACATCGGCGAATCCATCGAACGTGACGACAACTTCGTCGCGATTACAAGGCGAATTCAAGAAGCCGCAATTAAATGGCAACAATCGTCTGCCGTCACATCATCAATCGTCGACCGTTCGTGGCGGGTATGTCAAGCCGATGGACGGTAAACCACCGCACGAGGGTAGAGGTTCGTTCTCTGGCCAACCTGTCAAGCACGGCAATGCGATTACGAGTCACAGGTCCAACGGTATGCTCCCGGCGAAGGGGCCACCGCCATCCCAACCGCCGTCTACCTCACCTGTGGCTTCAAATACAAACACCAATAGGCCTCACACTCACAATCCTTCCAGAAGCAACCGAATATCATCCGATCAGATCGCCGGGACAGTCAGGGAAGTCGAAAGTATTCTCAAAgaAATGATCGACGTTCGGCCACCCTTGACAGCAATAGCAGCGACGCCACGTGTTGAACTGGATAGCAAATTTACGTTCAATCCGGAATTGGCAAAGCTAACGGAATCGACGCCGATTATTTCCAGTATCAGCAGCAGCAATACAAAAAAACGTGGAGAGCGTCAGCAACAGTCATCAACGTATCGACCGCAAACAGACCTTCGAGATGATCTCACGATATCTGACGACAGTGATGATGAACACAAAAGAAGTAATTCCAACAAGTTATCGATAGAAAAGATGCTATCTCCGATTGCCATGACACCCGCTAGTGGATCCATAAGTATTGAACCAATAGCGCCCATGTCTCCAGTACGAAGTTCGTCCAGCGATTCGGGATCGGATTCCGGTTCGGATTCAGATTCGAGTAGCGATGATTCGCCGGAAGAGACTCGTGCGGTGACGACAATCTCCAGAGCTACTAAAAGTCCTGCTACCGTACCTGTTGAATCAACGCCATTGTCTCCTGGTATTGTCgaagaagaagaggaaaaACGACAAACCAGATGGAATCTAGCATCGTATTTTTCCAATAACCTTAAGAATGATTCAGCGATCGCATCGGCAACTTCTCCACAACAAAACGTAACGTCTAACGCCCAGCCAAATAAATCGGATCAGTTGAGTTGTCACGATGATTCGGATGGTAGTGATTCGGCGAAAGATGTCGATAGAGTCTTAGAAGAAGCTATTGCTTCAAATCTTTGTACGCCGCTCTCGAGTCTTTCGGAATCTGACGGTAGTACTAAAAAGAAATCGCTAAGAAAACGGCGGCATATTGTTGGAAAATCAAATATCTCCGATGAGAGTCGCattgtttcaaaatcaaatatcTCCGAAGATAGTGATAGTGATGAAAGCCCTGTACGGACAAAAGTGCAAAAGCCTGTGAATCGTGCTAGCCCTAGAACTAAGTCTCCCGATACAAGTGAGTCCGAAGTGGAGAAACAATCAAAGACACcggtaaaatcaaaattattgccCGACAAGTCAGTGAAACCGAAATCAAATCGCGGTCGTCCACGTAAAAATAAACCTTCCAATAGCGGATCTGATCGTGAAGTTAAAAAGAAGCGTGGTCGTCCGCCAGGTAGTAGTAAGATTCGTCGTCAATCTGTTAGTGGGTCTGACAACGAAGCACCGAAGAAACGAGGCCGTCCGCCGTTGAAACCAAAACGACCGCCTTCTCCAAGTAGTTCCGATGAAGATGAACGACCTCGCGCTTTTGAAAAACCAATGCCGCCAAGACGACGAACGATATCAAAACGCGCTTCGTCTTCTAGTTCCGATTCAGACTGTAGGTCTAGATCTAGATCCTCGTCGTTTATTAAAGACACTGATAAAGATGTTAAGACGCCTAATAAGAAATTGCCAACTAAACAACATCGATCGCCAAGAATTGATGATAAACGGAAACGTCCCGATTCGGACAACGACGATTGGAGTCAAACTCGTAAAAATAAGTTACACAATTATCTGTTCGAAAAGAATGATCGAGAAGAAACGACGAATCAAAAAAGACCTTCTGAATCACCCCGCAAGAAAGAAACTAAAGTTCCTGTCAAACGTAAAGGAAGATCAAACTCGCAAAAAGGCGCTGCCTTCGTACCAATGAGTTCTGATTCTGACAGCGAGTCAGATGTCAGCAGAAAGAAATCGAAGAAAAAGAAGCCACCTGTACGTACCGCAAATAGAAGTGCACGGTCTTCCAGTTCTGAAGGCGATGTCAAACGCGACAGAAGTTCCGACTCTGAACCGCCCTCAATCGGTTCGAGCAAAATCGAAAGTCCTGCCAAACTTGGTTCAGACCACAGAGGCGTTCAAGATAAGAAGAAAAGCGACACACTCAGGAAACTATTCTTCACACCGAAGAGAGATTCGGAAGGTGGTAAGGGTGGTGGTAAAGGTGGTGCCAAAGGTGGAAAAGGTGGCAAAGGCAAGGGTGGTGTTAATGTGATTATCATGGATGGTGATTATGAGCGAAGTAGTTCATCAGTTGAGGACGAAGCAATGCCGACGATATCATCAAACACCTCTCTACTGCCCGCTCTACCGAGTGACACCAAACCCCAACCACACATAAACTCCGTCGACACTACAAAAATAAAGACTGAATTTTCGGATGGCTCTGACGTAAAGCCTAATAAAGTAAGTTTAATGGTCAGAATCGACCTAGACAGACTCTCTTACATACCCCCAAAtccaaaaaacaacaaaaagcaGCATTCTTCAGACGTAACGCGACAATGGTGCGATTTGTCTAGTTCGCGACAAGATAAACAGATAAAGAATACGTACGAGACGAATTGCGTTGAAGTAGTGAAGCATAGTGATTGTGAAGACAAACGGACTATTTGTAATGACAGTGATAGTGAGTTTAGCAAAAAGCACATAAAGGACGAACCTTTGATAGATACGAAGAGCAAGAAACGGAAAAGACATAACAGTTGCAGCAGTTTGTCGTCGATATCGACAATAAGCAGTATGTCACACAGCAGCAGGAAGAAGGAGCATTCAAAAGAACGCAGCAATCACAAGAACAAACGGCGGAAAGGTGACATATCAGATATGTCATCACAACGAAATTATGACGATAGAGGCAGCAACCTTCTTCGTGAACGCGAAGGACCACGTACACCACCGATGCCTTTTCCCATTGGACCGCAACCAATTCGAGAATATCATTCTTATTTTGAACGGACTGATGAACCATCCGACGAAGAAAGAGATCAAAATAGGTACCTGAATGAAGCTAAGAGGTTGAAGCATCTAGCAGACAAAGAAAAAGacacaataaaacaatgtATGTTGTACCTGGAGGCTGTGCTTTTCTTCTTGCTGACTGGCAATGCCATGGAATCCGAAAGTGTTTCAGAAAAGGCTGCCTTCACAATGTACAAAGATACTCTGTCTCTTATTAAGTATATATCATCAAAATTCAAGAATCATCAGAACACTTCCTCGGTTCATAACAAATTAGCGGTATTGagCTTTCGGTGTCAAGCGTTGCTGTACTACAAGTTACTAAAAATGCGCAAAGCTGAAATGAAGGACTACCAGAAAATAATCTCTGAATATTGTTCAAAGTCAGCAACGACAACACCAATTCAGTCGGaccaaataaatcaattactaGGTGGTCAAGGTACACCCAGTCCTTTATCGCCAACACCATCACCTGCAGGATCAGTCGGTTCAGTTGGTAGTCAATCGTCTGGCTATGGAAGTGGTGAACTCGCTGGTAGAGGCAGCAATTCCTCGCAGACGCCGGTGATACCTCAAGCACCGCAACAATGTATGCTTGTTCCTGTCGCGGTGTACAACGCCATCACAAAACAGAACCAAAACGtaatttattcaatctcaTATCAAGATTTATGGGAACAAGCCGATAATATTGTCATTAAAGGCAAACATATAGACAATTATCCTTGTCTATTACTTTTAGACTTCTTCATTGAATTGGATCGAAAATGCAAACCGTTAACACTGCATAGTTCTTTAACTGATTTGGTACGCTACGTACGAGCTGGTATAGCAAAACTGAAAGCACAGGACAACTGA
Protein Sequence
VNPSSADRVTQEIQSKLGDFQKVKLYLDSKQLIAPDGGGGGAGGGSGSSSTGTTSANPSNVTTTSSRLQGEFKKPQLNGNNRLPSHHQSSTVRGGYVKPMDGKPPHEGRGSFSGQPVKHGNAITSHRSNGMLPAKGPPPSQPPSTSPVASNTNTNRPHTHNPSRSNRISSDQIAGTVREVESILKEMIDVRPPLTAIAATPRVELDSKFTFNPELAKLTESTPIISSISSSNTKKRGERQQQSSTYRPQTDLRDDLTISDDSDDEHKRSNSNKLSIEKMLSPIAMTPASGSISIEPIAPMSPVRSSSSDSGSDSGSDSDSSSDDSPEETRAVTTISRATKSPATVPVESTPLSPGIVEEEEEKRQTRWNLASYFSNNLKNDSAIASATSPQQNVTSNAQPNKSDQLSCHDDSDGSDSAKDVDRVLEEAIASNLCTPLSSLSESDGSTKKKSLRKRRHIVGKSNISDESRIVSKSNISEDSDSDESPVRTKVQKPVNRASPRTKSPDTSESEVEKQSKTPVKSKLLPDKSVKPKSNRGRPRKNKPSNSGSDREVKKKRGRPPGSSKIRRQSVSGSDNEAPKKRGRPPLKPKRPPSPSSSDEDERPRAFEKPMPPRRRTISKRASSSSSDSDCRSRSRSSSFIKDTDKDVKTPNKKLPTKQHRSPRIDDKRKRPDSDNDDWSQTRKNKLHNYLFEKNDREETTNQKRPSESPRKKETKVPVKRKGRSNSQKGAAFVPMSSDSDSESDVSRKKSKKKKPPVRTANRSARSSSSEGDVKRDRSSDSEPPSIGSSKIESPAKLGSDHRGVQDKKKSDTLRKLFFTPKRDSEGGKGGGKGGAKGGKGGKGKGGVNVIIMDGDYERSSSSVEDEAMPTISSNTSLLPALPSDTKPQPHINSVDTTKIKTEFSDGSDVKPNKVSLMVRIDLDRLSYIPPNPKNNKKQHSSDVTRQWCDLSSSRQDKQIKNTYETNCVEVVKHSDCEDKRTICNDSDSEFSKKHIKDEPLIDTKSKKRKRHNSCSSLSSISTISSMSHSSRKKEHSKERSNHKNKRRKGDISDMSSQRNYDDRGSNLLREREGPRTPPMPFPIGPQPIREYHSYFERTDEPSDEERDQNRYLNEAKRLKHLADKEKDTIKQCMLYLEAVLFFLLTGNAMESESVSEKAAFTMYKDTLSLIKYISSKFKNHQNTSSVHNKLAVLSFRCQALLYYKLLKMRKAEMKDYQKIISEYCSKSATTTPIQSDQINQLLGGQGTPSPLSPTPSPAGSVGSVGSQSSGYGSGELAGRGSNSSQTPVIPQAPQQCMLVPVAVYNAITKQNQNVIYSISYQDLWEQADNIVIKGKHIDNYPCLLLLDFFIELDRKCKPLTLHSSLTDLVRYVRAGIAKLKAQDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-