Lnew003408.1
Basic Information
- Insect
- Liometoxenus newtonarum
- Gene Symbol
- dl
- Assembly
- GCA_030264535.1
- Location
- JARJEB010005508.1:1-8078[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1 5e+03 -2.4 0.1 52 69 41 58 31 59 0.78 2 3 1.2e-70 5.3e-67 225.4 0.0 1 169 64 236 64 236 0.96 3 3 0.3 1.4e+03 -0.5 0.0 35 87 609 662 603 737 0.80
Sequence Information
- Coding Sequence
- TCACCGGATAACGAAGTTTCGCATCCAGTGGACGAGAAAATTACTTTGAGTGATGTCAttGCCTGTATACAAACTGATCTGAACTCACCGGAACATCAAGTCGCCTCACAATCACAATCGACGCAAATTAAGAATATTGAAGAAGAAAACCCGGCGCGTATGCATCCACACGACATGGAAAAGCCGTACGTGAGGATAATTGAGCAACCAGCATCGAAAGCATTGAGGTTTCGTTATCAATGCGAAGGACGTTCAGCTGGTTCGATACCCGGTGTGAATAGTACCAGCGATGTGAAAACTTATCCAGCCATACAGGTTATCGGCTATAAAGGACCAGCGGTGGTTCTTGTTAGTTGCGTCACGAAGGACGCACCATATCGGCCGCATCCGCATAATCTTGTTGGCAGAGAAGGTTGCAACAAAGGTGTTTGCACATTGGAGATTCCTCAGGATACGATGTCGattactttttcaaatttaggtATTCAATGCGTCAAGAAGAAAGATATTGGAGAACATTTAGATGAACGCAAAGCATATAAAGTTGATCCATTCGGAACTGGTTTTCAACATAAAAATCAACCGACATCTATAGATCTAAACGTTGTGCGTTtatgttttcaagtttttattcCGAATGTGAATAAGGGTGATAAGAAATATTCAGTACCACTGACTCCAGTTGTCAGTGATCCAATTTATGATAAGAAAGCAATGTGCGATTTAACAATTGTTAAGTTATCAGATTGCGTTAGCACTGTTGACGGGGGACGCAAAGatatcattttattatgtGAAAAGgtGACAAAAGAAGACATCGAGGTACGTTTCTACGAAGAACACGAAGGTCATGTAATGTGGGAAGCGAAAGGAGATTTTCAACCATCTCAAGTTCACAAACAAACAGCAATATGGTTCCGAGCACCGAAATATCGAACACTGGACATCACCGAGCCAGTAAGGGTGTGCATTCAATTGCGACGACCCTCCGATGGAGCCACATCAGAACCATTACCCTTCGAAATGTTACCTTTAGATTCAGGTAGGCCAGCATTTTGGTCAATACGTCGCAACTACAAGAAATCGAGTGCGTACGATCTATTCAATTCGGCCTTGGCCACTGATGCCGAAACGATACGCAAGagacaattaaataatttagcaAACTTAGTCGCCGGTGTTGAGAATGCGAGTAATAATAACAAGCCAGAACCCGAATACGGGGAAATTAAAAAGACCAAATTATCAACTCCCCAAATAACTAAAGTCGAAAATGACTCAAAGTCGACTAATCAACAAACGGTTGAAGTTGATATTGAAATGACTGATAACTATGAACCAGTTGGAAACACATCGAATGATATTTTAATGTGTAACGTTGAAGATGATGTGTTGAAGTGTACCGAGGAAGATGTTATTAGGGAAGTTGTTGAATTGgatgaaatttattcagatAATCAGAAACGCATTGAAATGATTGATCAACAAAATCAACTCGAGCCTCCACTCGCGGAAAGTTCTTTAGAAGCACAAGAATCGTTTGATGATGCTAAAACTTATAGCAGTTTGCAAATGGCGTTCAAGAATCCCATGCGAATAATTGATATTGattttaatgataaatatGAGGATATCATAGTCCCAAATAGTCCTTTAATCGATGTAACTAAATTGCCACAAGAAATGGCgctatttgaaaatgaaaaacctcCAAGTCCTAATTTGATCCCAGAGTCGGAACTAATTGAGGAACCATTACCTCCGCTACCCCCAAAACGAACACGCAAAGTAATCGAAACTGATATAGACGATCCAGGCTCCGGTAATGGTAACCATCAAACGGTTGAAACAATTCCTTTATCGAGTCAGGAAGCTGTTAACGTTCTATGCTCCACGTCTACAACACCTATTTCTTTATCCCGCAGTCATAGCATGTTGTCAAGGTCACAAAATGATTTGGCCCCTGAAAAGCGCTTACCACCGAAACCCACGTCAACATTACCAAATCCAAAGAAGCGTggatttttttcgaaattatttgGCAGGAAACAAGTTGAAAGTGCTCCCCAATCAAAACGCTGTTCATTGACGACTAGTGGGAATTTGAAAGTGTCCAATGTTAGTTTGAACCGGACACCGAGTAATATGTCAAATCGATCGAATCTAAGCTATAGGATACCCCTCAAAGATTCGAACACTGATTTGAATGATCTTAACGTTTCAAATATCGATATCGGTCGCAAAGATGAATTGCaagaattaaatataaacaatttaaataataatcggGATAGCGTTAGTAGATTGAATGAAGACGATGATTTGAATATGAATTTAGATTTGACCGAAGCGGAACACTACGCTTTGTACACGGCAATGGCTCCCCATGCTACACAAAGTGAGTTTGACGAAATGTCAGCTTACTATGCACCTGTTGAAGGTGGCAAATTATTGTTACATCAAGTTAACAATCCAAACGGAACATGA
- Protein Sequence
- SPDNEVSHPVDEKITLSDVIACIQTDLNSPEHQVASQSQSTQIKNIEEENPARMHPHDMEKPYVRIIEQPASKALRFRYQCEGRSAGSIPGVNSTSDVKTYPAIQVIGYKGPAVVLVSCVTKDAPYRPHPHNLVGREGCNKGVCTLEIPQDTMSITFSNLGIQCVKKKDIGEHLDERKAYKVDPFGTGFQHKNQPTSIDLNVVRLCFQVFIPNVNKGDKKYSVPLTPVVSDPIYDKKAMCDLTIVKLSDCVSTVDGGRKDIILLCEKVTKEDIEVRFYEEHEGHVMWEAKGDFQPSQVHKQTAIWFRAPKYRTLDITEPVRVCIQLRRPSDGATSEPLPFEMLPLDSGRPAFWSIRRNYKKSSAYDLFNSALATDAETIRKRQLNNLANLVAGVENASNNNKPEPEYGEIKKTKLSTPQITKVENDSKSTNQQTVEVDIEMTDNYEPVGNTSNDILMCNVEDDVLKCTEEDVIREVVELDEIYSDNQKRIEMIDQQNQLEPPLAESSLEAQESFDDAKTYSSLQMAFKNPMRIIDIDFNDKYEDIIVPNSPLIDVTKLPQEMALFENEKPPSPNLIPESELIEEPLPPLPPKRTRKVIETDIDDPGSGNGNHQTVETIPLSSQEAVNVLCSTSTTPISLSRSHSMLSRSQNDLAPEKRLPPKPTSTLPNPKKRGFFSKLFGRKQVESAPQSKRCSLTTSGNLKVSNVSLNRTPSNMSNRSNLSYRIPLKDSNTDLNDLNVSNIDIGRKDELQELNINNLNNNRDSVSRLNEDDDLNMNLDLTEAEHYALYTAMAPHATQSEFDEMSAYYAPVEGGKLLLHQVNNPNGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -