Basic Information

Insect: Liodrosophila aerea
Gene Symbol: stc
Assembly: GCA_035045005.1
Location: JAWNNL010000138.1:73683-77086[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.4 1.4e+04 -3.7 0.5 15 18 368 371 367 372 0.79

2 15 2 2e+04 -4.1 1.6 15 19 395 399 394 399 0.81

3 15 0.095 9.3e+02 0.1 2.6 4 11 428 435 427 436 0.91

4 15 5.9e-07 0.0058 16.8 15.1 1 19 440 457 440 457 0.93

5 15 1.7 1.7e+04 -3.9 0.9 6 10 483 487 482 487 0.88

6 15 6.9e-06 0.067 13.3 19.3 1 19 493 511 493 511 0.97

7 15 1.7 1.7e+04 -3.9 1.5 7 13 515 521 515 522 0.75

8 15 2e-09 2e-05 24.6 12.9 1 19 551 569 551 569 0.98

9 15 2.4e-05 0.23 11.6 17.0 4 19 617 632 610 632 0.88

10 15 0.062 6.1e+02 0.7 11.7 1 11 672 682 672 694 0.79

11 15 4.8e-10 4.7e-06 26.6 15.5 1 18 699 716 699 717 0.97

12 15 2 2e+04 -4.4 1.2 6 10 746 750 746 750 0.88

13 15 2 2e+04 -6.7 9.4 10 18 764 773 753 774 0.78

14 15 5.4e-08 0.00052 20.1 13.1 1 16 810 825 810 835 0.93

15 15 1.4e-07 0.0013 18.8 14.1 1 19 842 861 842 861 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.4	1.4e+04	-3.7	0.5	15	18	368	371	367	372	0.79
2	15	2	2e+04	-4.1	1.6	15	19	395	399	394	399	0.81
3	15	0.095	9.3e+02	0.1	2.6	4	11	428	435	427	436	0.91
4	15	5.9e-07	0.0058	16.8	15.1	1	19	440	457	440	457	0.93
5	15	1.7	1.7e+04	-3.9	0.9	6	10	483	487	482	487	0.88
6	15	6.9e-06	0.067	13.3	19.3	1	19	493	511	493	511	0.97
7	15	1.7	1.7e+04	-3.9	1.5	7	13	515	521	515	522	0.75
8	15	2e-09	2e-05	24.6	12.9	1	19	551	569	551	569	0.98
9	15	2.4e-05	0.23	11.6	17.0	4	19	617	632	610	632	0.88
10	15	0.062	6.1e+02	0.7	11.7	1	11	672	682	672	694	0.79
11	15	4.8e-10	4.7e-06	26.6	15.5	1	18	699	716	699	717	0.97
12	15	2	2e+04	-4.4	1.2	6	10	746	750	746	750	0.88
13	15	2	2e+04	-6.7	9.4	10	18	764	773	753	774	0.78
14	15	5.4e-08	0.00052	20.1	13.1	1	16	810	825	810	835	0.93
15	15	1.4e-07	0.0013	18.8	14.1	1	19	842	861	842	861	0.97

Sequence Information

Coding Sequence: ATGGCCGAATACTGGCAACAAAATCAGCCacaaatgcagcaacagcaacaacaattgcatatAAACGGAGCAGCTACCGCTGCTACAGCTCCGAATGAGTCAGCCACGCTCTCTGCTTGCAATGGCGTCGGCAGTGGTGCTGACGTCGCTGCCACTGTGACtgccagtggcaacaacaataacaactatgTTAACTTTAATCAGTTTATCACACAACATAACCTGGCCAGCTCCAGCCTGGCCTATGTTGGAGGGGGCAGCGGCGGAGGCGGTGCCTTTGGATTGACGCCAAACAGTAATTCCACCGATGCGAGCAACAACAGTGCAAGTTTTGGTGGAACGTATGCGCCACCCTTCTTTGGCAGCAGTGGCTATAACTATGCGGGCCGAACTGGTTATCCCACTGTGTATTCACCGTTTGGCAATAATCCTTTTGCTACCACTGGCTTCGATTTTAGCACTTCCAAACTACAGGCATCAGCGCCCGAATTTGTGCCGACCTTTGCCAAACTGAGTCTGTCCGCGgatgcaaatgcaacagcGGCTGGGGCCCTTGAGCCGCAgcgaaacaacagcaaaaacaataacagcagcactGCCACAGAGTCTCATAGTGATTCACTGAATGGAGCAGGTATTACTTATAACCAACAACAGTCTCAACAGCCAAGACTGGGAGCACCGCCCACCGAGCCACGACAGACCAGGTCGCAGGGTAGCAGCAGTCGGCAGCAGCGCCGCAACGACTATCGGGAGGACCGGAGCGAGCGTAATGAGGATCGTTACGACCGCAAAAAGCCACAGAAGCAACAACGCTACGACAATCATCGCAGTAATAAACGACGCGACGACTGGAATCGAAATAGAGATCGCATCAATGGCTATCCGCGATCCAATGAGGAGCTGGACACCAGCAATAGCAACGACAGCGCCCAGCCCTCGCCcgagaaacagcagcagcagccacaagtCTCCCCCAGACGCGCACCAGACAATGAAAAGTTGTCGCAGCGAGAGAAACTCATGCGAGACATTGAGCAGCGGCGTCTGGAGTGCTTGGTGTGCGTTGAACAGATCAAGGCACATCATGGCACCTGGTCGTGCCAGAACTGTTACCACGTGCTGCATCTCAAATGCACCATCACCTGGGCGAGCAGCTCCAAATCAGCCGAGGGCTGGCGTTGTCCCGCCTGCCAGAATGTGCTAGAGGAGCTGCCCCGTGACTACCTCTGCTTCTGTGGCAAACTCAAGAATCCACCACTGTCGCGCAACGAATTGCCGCACAGTTGTGGCGAGCCATGTTGTCGTGTTGAGGGCTGCAGTCATGCGTGCACCCTGCTCTGTCATCCGGGTCCATGCCCGCCCTGCCAGGCGAATGTGAGCCGCAGCTGCGGCTGTGGGCGCACCAACAAGCTGATGCAGTGCGCTAtgaagcagcagttgcagtgtGAGGCCATTTGCGATAAGCTGCTCAACTGCGGTGAGCATCATTGCCAACAAGGTTGTCATGCGGGCAAATGTGAGCCCTGCACGGAGCAAGTGCAGCAGAACTGCCACTGTGGGAAGCAGCAACGCGAAGTGCAGTGCACTAAGGAGAGTCTGGACAAGCGTAACTACTCCTGCAAGGAATGCTGCGGCAAGCCACTGCCGTGCGGCAACCACAAGTGCAAGGATTCCTGCCATGCCGGCGCCTGTCGCCCATGCAAGCTCAGTCCCTCGCAAATCACCAGTTGTCCCTGCGGCAAGCTGCCTGTGCCAGCAGATCAGCGCAGCAGTTGCCTCGACCCGGTGCCCACCTGCGAGGGTGCCTGCAGCAAGACCCTACGTTGCGGCAAGCCAGCGCATCCACATCAGTGTGCCAGCAAATGCCACTTGGGACAATGTCCACCCTGCCCCAAGCAAACGGCTGTCAAGTGCCGCTGTGGACACATGGATCAGATGATCAAGTGCCGGCAGTTGTCGACTCGAGCGGACGATGCTCGTTGCAAGCGACGCTGCACCAAGAAACGTAGCTGTGGCAAGCACAAGTGTAACGCCGAGTGCTGCATTGATATCGATCATGCCTGCCCGCTGCCCTGCAATCGCACCTTGAGCTGTGGCAAGCACAAGTGCGATCAGCCGTGTCATCGCGGCAATTGCCCGCCCTGCTATCGCAGCAGCTTCGAGGAGTTGTATTGTGAGTGCGGCGCAGAGGTCATCTATCCGCCGGTGCCGTGTGGCACCAAGAAGCCCGTCTGCAAGCGTCCCTGCACGCGTACTCATGGCTGCGAGCATGTGCCTCAGCACAATTGCCATGCGTCGGCCACGTGTCCGCCCTGCATGATGTTCACCACGAAATGGTGCCACGGCAATCATGAGCAGCGCAAAACCATTCCCTGCTCCCAGGCCACCTTTAGCTGCGGTCTGGCATGCGGCAAGCAATTGGCCTGTGGACGCCACAAGTGCATCAAGCCATGCCACGAGGGCGACTGCCAACTGGCGGGCGAGCTATGTCGTCAGAGTTGCACTACGGCGCGTCTACAATGCGGACATAAGTGTGCGGCACCTTGCCATGACGGTGATTGTCCAGACACGCCCTGTAAAGAGCTGGTCGAGGTGCAATGTGAGTGCGGCAATCGCAAGCAGAGTCGCAGCTGCCAGGAGCTGGTCAGGGAGCACAGTCGCATTGCCACCGCTCAATTGGCCTCATCCATGGCGGAAATGTCGCGTGGCAACTACATGGAGCTCAGCGAGATCCTAGCTCCCGTCAAGGCTAACAAATCCAACAAAACCTTGGACTGCAATGATGAGTGTCGGCTGTTGGAGCGCAATCGTCGCCTGGCTATTGGTTTGCAGTCACGTAATCCGGACACACAGCTGAAGTCACTCACCAAGTACACGGAGTTCTTGAGAGGATTTGCCAAGCGCAATCCAGCGGTAACTAAGAGCGTGTATGAGACGCTTACCGATTTGGTCAAGCTGGCCAAGGAGAGCAAACAGAAGTCGAGGAGCCATTCGTTTCCGACCATGAATCGTGAGAAGCGTCAAATGGTGCATGAACTGTGCGAAGTGTTTGGCATTGAGTCCGTCTCCTACGACAAGGAGCCCAACCGTAATGTGGTGGCCACGGCACACAAAGAGCGCTGCTGGTTCCCTGCCACTAGCATTATGGAGGTGTTGGCACGTGAATCCGGACAGCGTCGTGTACCCGTGCCCAGCAACAATGTCTGGAGTCTCAAAAAATAG
Protein Sequence: MAEYWQQNQPQMQQQQQQLHINGAATAATAPNESATLSACNGVGSGADVAATVTASGNNNNNYVNFNQFITQHNLASSSLAYVGGGSGGGGAFGLTPNSNSTDASNNSASFGGTYAPPFFGSSGYNYAGRTGYPTVYSPFGNNPFATTGFDFSTSKLQASAPEFVPTFAKLSLSADANATAAGALEPQRNNSKNNNSSTATESHSDSLNGAGITYNQQQSQQPRLGAPPTEPRQTRSQGSSSRQQRRNDYREDRSERNEDRYDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRSNEELDTSNSNDSAQPSPEKQQQQPQVSPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLEELPRDYLCFCGKLKNPPLSRNELPHSCGEPCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTNKLMQCAMKQQLQCEAICDKLLNCGEHHCQQGCHAGKCEPCTEQVQQNCHCGKQQREVQCTKESLDKRNYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPSQITSCPCGKLPVPADQRSSCLDPVPTCEGACSKTLRCGKPAHPHQCASKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPVCKRPCTRTHGCEHVPQHNCHASATCPPCMMFTTKWCHGNHEQRKTIPCSQATFSCGLACGKQLACGRHKCIKPCHEGDCQLAGELCRQSCTTARLQCGHKCAAPCHDGDCPDTPCKELVEVQCECGNRKQSRSCQELVREHSRIATAQLASSMAEMSRGNYMELSEILAPVKANKSNKTLDCNDECRLLERNRRLAIGLQSRNPDTQLKSLTKYTEFLRGFAKRNPAVTKSVYETLTDLVKLAKESKQKSRSHSFPTMNREKRQMVHELCEVFGIESVSYDKEPNRNVVATAHKERCWFPATSIMEVLARESGQRRVPVPSNNVWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: -
80% Identity: -