Laer010292.1
Basic Information
- Insect
- Liodrosophila aerea
- Gene Symbol
- GATA6
- Assembly
- GCA_035045005.1
- Location
- JAWNNL010000923.1:505120-508437[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2 3.5e+03 -2.2 1.7 1 15 475 486 474 494 0.62 2 2 2.7e-17 4.4e-14 51.9 8.0 1 34 526 558 526 560 0.97
Sequence Information
- Coding Sequence
- ATGGAAACGCAGACAacgccgcaacagcagcagcaacaattgcaacaacagcagcagcagcaacaagtgttGAGCAAacagcagttgcaattgctggataaaatcaaaattgaaaCGAGCAACGGCAACGATCCTCAGGGCAACAGTGTACtggaggagcaacagcaacagcagcagcaacaggagcagcagcagcaaccagcaaCATCTGTTGGTGTTCTCGTGCAGACCAATAGCCAAGGCGAGGCggatgaacagcagcagcagcaacagacacaGTACGTCGTTGTGCCACGTGGACAACAGCGTAGGATACTGACCACAGCAGGCACCCTCGAACTAAACGATCCGCGTGAGGGCGAGCACAGCgctagcaacagcaatagtgGCAGCTCCAATCCGGCTCAGGATCACATTGAGTATCGCGGCGGCAATACGCATCATTCGCCGCATCACTACGTACAGATGGCGCCACGCAATGCCGCCGATGTGGATGCGCCACCGGGCACCCTGTATGCGTATGGTGCAGGTCAGATAATTTGCAGCAGCGACGATGTGACTGCCATAAAAATCGAGACGATCGACAAGACCGAGGTGTCGGGCgaggcacaacagcaacagttgcagcagcaacagcaacagcagcagcagcatcaacaccagcagcagcatcagtgtCCAACACCCAATGGCGGTGCCTATGCGGATACCATTGTGGTCAGCAGTGAAGCTGCACTGCAGcaccatcatcagcaacagcagcaacaccaagctgtagcagcagcagctgctgcagccgcagcTGCCGCTTCTGCTGCGGCAGCAGGACACAATCAGAGCCTGCGGTATGTAACGGAAGATGGACGCTTCACCACAGTCAGTACGAGTGGCGGTGGTGcggctggtggtggtgcaggtAATGAATCGGAGCCAACTGGCGGCAATATCTATTACGATGCGCCGGTTGTCGATGCCAGCGTACATCCGAATGAGTCCAAGACCTATGCGGATCTGGGCAATGCCTATGCCACCTTTCCGCCCAACTCTGccttcagcagcaacagctatgccaccacagccacactGCAGCAGGGCAACACCATCTACAGTGTGCCGGCGACAGCGCAGTTCATCACGAAAACCGATCCCAATCTCAATCTCCGCCAGTCGGCGGCCACCTACCAAGCCATATCCTTTCTGGATGGCAATGCCAACGATGCGGCGCTGTGGACCACGGCGGGACCGGAGTATCAGAATGTGTCCTTTACCAACTATCATCCGCAGATGATCGACGAGTATGCCACCGGCAACATGACCACCGCCCATTGGAATCCTGCCAGCAGCGTCGGTGGCTATGATCCCAGCAGTCTGGCCTCCTCAAGCGCCAGCACGCCCCCCACGCACGGCCTAGCTGAGCCCAAGTGCGAGTCCTGCCAAACACCGTTCATGCGCAAGGGTGCCGACTGGTTCTGTCCCGCCTGCAGCAACTTTGGCCGTGTCCTGCCGCCCCGTCTGCCTCAGCGTCAGAAGCCCAAGGCAGCAGCGGCGCCAAACAATCGTCGCAGTGGCGTCACCTGCGCTAATTGCCACACCAATTCGACCACCTTGTGGCGTCGCAACAACGAGGGCAATCCCGTATGCAATGCCTGTGGCCTGTACTACAAACTGCACAACATGAATCGACCCCTCTCCATGAAAAAAGAGGGCATACAGAAGCGCAAGCGGAAACCCAAGAACAATGGAGGACCCATGCCACAACGGGCACTGCCAAGTATGGGTGTTAATTTAATGGTCAACAGCGGCACCCTGTACCCCTCACAGGTGGCCGTGGGTCTGCTGAACAGTCAACAGAATGGCAGTCCAGAGTTGCACGACATGTCCGCCACAGGACCCGCTGGAGGTGCTGCAGCTGGTGCCCGAGTAGTGACCATTGCGTTGAATGCCGCAGTGCCAACTTCAGATGGCACGCTGAATATGTCCAGGCATCATGTGACCAGCGAGGGTCACTCCCCgtacagccagcagcagcaacaacagcagcagcagcaacaacctcCGGCGCAGAGTCAATCCCCACACTTGCCCAACTCAAGCACACTCAACCGGCAGATGTCACAATCTGTACCGCCGATTGAGAACAGTCGCAGTTCACAGAGCGAACTAACTCCGAGTGTTATAACGCGCACTGGACTGCCGGAGCGCACTTCGAATAACTAA
- Protein Sequence
- METQTTPQQQQQQLQQQQQQQQVLSKQQLQLLDKIKIETSNGNDPQGNSVLEEQQQQQQQQEQQQQPATSVGVLVQTNSQGEADEQQQQQQTQYVVVPRGQQRRILTTAGTLELNDPREGEHSASNSNSGSSNPAQDHIEYRGGNTHHSPHHYVQMAPRNAADVDAPPGTLYAYGAGQIICSSDDVTAIKIETIDKTEVSGEAQQQQLQQQQQQQQQHQHQQQHQCPTPNGGAYADTIVVSSEAALQHHHQQQQQHQAVAAAAAAAAAAASAAAAGHNQSLRYVTEDGRFTTVSTSGGGAAGGGAGNESEPTGGNIYYDAPVVDASVHPNESKTYADLGNAYATFPPNSAFSSNSYATTATLQQGNTIYSVPATAQFITKTDPNLNLRQSAATYQAISFLDGNANDAALWTTAGPEYQNVSFTNYHPQMIDEYATGNMTTAHWNPASSVGGYDPSSLASSSASTPPTHGLAEPKCESCQTPFMRKGADWFCPACSNFGRVLPPRLPQRQKPKAAAAPNNRRSGVTCANCHTNSTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEGIQKRKRKPKNNGGPMPQRALPSMGVNLMVNSGTLYPSQVAVGLLNSQQNGSPELHDMSATGPAGGAAAGARVVTIALNAAVPTSDGTLNMSRHHVTSEGHSPYSQQQQQQQQQQQPPAQSQSPHLPNSSTLNRQMSQSVPPIENSRSSQSELTPSVITRTGLPERTSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00832569;
- 90% Identity
- -
- 80% Identity
- -