Basic Information

Gene Symbol
GATA6
Assembly
GCA_035045125.1
Location
JAWNNJ010001579.1:648936-653744[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.56 1.1e+03 -0.7 1.6 3 17 485 499 484 506 0.82
2 2 2.1e-17 4.2e-14 51.9 8.0 1 34 537 569 537 571 0.97

Sequence Information

Coding Sequence
ATGGAAACGCAGGCAAcgccgcaacagcaacagcagcaacaattgcaacagcaacagcaacaacagcagcagcagcagcagcaacaagtgttaagcaaacagcagctgcaattgctggataaaatcaaaattgaaacCAGCAACGGCAACGATCCCCAGGGCAACAGTGTGCTGGAGGAGCATcaacagcaggagcagcaacagcagcaatcggCGGCGTCTGTTGGTGTCCTTGTCCAGGCCAATAGCCAACCAGAGGtggatgagcagcagcagcagcaacagcaacagcagcagacgcagtACGTCGTTGTGCCACGTGGCCAGCAGCGTAGGATATTGACCACAGCAGGCACCCTCGAATTAAACGATCCACGTGAGGGCGAGCAcagcgccagcaacagcaatagcgGCAACTCCAACCCGACTCCGGATCACATCGAGTACCGAGGCGGCAACACGCATCACTCGCCGCATAATTACGTACAGATGCCGCCACGCAATGCCTCCGAAGTGGACGCACCGCCTGGCATCCTGTATGCATACGGTGGGGGTCAGATTATCAGCAGCGGCGACGATGTTACTGCGATCAAAATCGAGACGATCGACAAGAGTGAGGTGACAGGCGAggcacatcagcaacagcagcagcagcagctgcagcagcaacatcagcaccagcagcagcatcagtgCCCCACGCCCAATGGCGGTCCCTACGCGGATGCCATTGTGGTCAGCAGCGAGGCTGCACTGCAGCATCatcaccagcaacagcagcagcagcagcaacaacagcagcaacatgcagtagcagcagcagctgctgcagccgctgctgccgcttccGCTGCCGCAGGACACAATCAGAGTCTGCGCTATGTGACGGAAGATGGACGCTTTGCCACAGTCAGTGCTAGTGGAGGGGTAGCAGCTGCTGGTGGCAACGACTCGGAGTCAGGTGGAGGCAATATCTACTATGATGCGCCGGTTGTGGATGCCAGCGTGCATGCGAACGAGTCGAAGACCTATGCGGACTTGGGCAACGCCTATGCCGCCTTTCCGCCCAACTCGGCCTTCAGCAACGGTTATGCCACAACGGCCACACTGCAGCAGGGCAACACCATCTACAGTGTGCCGGCCACAGCGCAGTTCATCACGAAAACCGATCCCAATCTCAATCCGCTGCGGCAGTCAGCAGGCACCACCTACCAAGCCATATCTTTTCTGGAAGGCAGCAATGCCAACGATGCGGCGCTGTGGACCTCTGCGGGACCGGAGTACCAGAATGTGTCCTTTACCAACTATCATCCGCAGGTGATCGACGagtatgcaacaggcaacatGACCGCCGCCCATTGGCCTACGGCCACCAGCATCGGAGCCTACGATCCCAACAGCCTGGCCCCCTCCAGCGCCAGCACGCCCCCCACGCACGGCTTGGTCGAACCCAAGTGCGACACCTGCCAGACGCCATTCATGCGCAAGGGCGCCGATTGGTTCTGTCCCGCCTGCAGCAACTTTGGACGCGTCCTGCCGCCCCGTCTGCCCCAGCGCCAGAAGCCCAAGGCTGCGGCAGCGCCTAACAATCGTCGCACTGGCGTCATCTGTGCCAATTGCCACACGAACTCCACCACCCTGTGGCGTCGCAACAACGAGGGTAACCCGGTGTGCAATGCCTGCGGCCTGTACTATAAGCTGCACAACATGAACCGACCACTTTCCATGAAGAAGGAGGGCATACAGAAGCGCAAGCGGAAACCGAAGAACAATGGAGGCCCCATGCCCCATCGAGGGCTGCCAAGCATGGCACAGGGTGTTAACTTAATGATCAACAGCGGCAGCCAACTGTATCCCTCGCAGGTCTCGGTGGGTCTGATGAACAGCCAACAGAATGCCAGTCCGGAGCTGCACGATATGTCGACCACAGGACCCGCTGGTGGTGGCGCACCCGGTACGCGAGTGGTGGCCATTGCCCTGAACACCCCAGTGCCCACTTCAGATGGCACTCTCAACATGTCCAGGCACCACGTGACCGGTGAGAATCATTCCCCCtacagccagcagcagcagcagcagcaacagcagcagcagcaacaatctcCGGCACAAAGTCAATCCCCACACTTGCCCAACTCAAGCACACTCAATCGACAGATGTCGCAGTCtgtaccCCCAATTGAGAGCAGCCGCAGTTCCCAGAGCGAACTAACTCCGAGTGTTATAACGCGCACTGGATTGCCGGAGCGCACTTCGAATAACTGA
Protein Sequence
METQATPQQQQQQQLQQQQQQQQQQQQQQVLSKQQLQLLDKIKIETSNGNDPQGNSVLEEHQQQEQQQQQSAASVGVLVQANSQPEVDEQQQQQQQQQQTQYVVVPRGQQRRILTTAGTLELNDPREGEHSASNSNSGNSNPTPDHIEYRGGNTHHSPHNYVQMPPRNASEVDAPPGILYAYGGGQIISSGDDVTAIKIETIDKSEVTGEAHQQQQQQQLQQQHQHQQQHQCPTPNGGPYADAIVVSSEAALQHHHQQQQQQQQQQQQHAVAAAAAAAAAAASAAAGHNQSLRYVTEDGRFATVSASGGVAAAGGNDSESGGGNIYYDAPVVDASVHANESKTYADLGNAYAAFPPNSAFSNGYATTATLQQGNTIYSVPATAQFITKTDPNLNPLRQSAGTTYQAISFLEGSNANDAALWTSAGPEYQNVSFTNYHPQVIDEYATGNMTAAHWPTATSIGAYDPNSLAPSSASTPPTHGLVEPKCDTCQTPFMRKGADWFCPACSNFGRVLPPRLPQRQKPKAAAAPNNRRTGVICANCHTNSTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEGIQKRKRKPKNNGGPMPHRGLPSMAQGVNLMINSGSQLYPSQVSVGLMNSQQNASPELHDMSTTGPAGGGAPGTRVVAIALNTPVPTSDGTLNMSRHHVTGENHSPYSQQQQQQQQQQQQQSPAQSQSPHLPNSSTLNRQMSQSVPPIESSRSSQSELTPSVITRTGLPERTSNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00901898;
90% Identity
-
80% Identity
-