Laer003918.1
Basic Information
- Insect
- Liodrosophila aerea
- Gene Symbol
- Rel
- Assembly
- GCA_035045005.1
- Location
- JAWNNL010000520.1:466227-469197[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-51 1.2e-47 162.1 1.1 1 168 154 336 154 337 0.95 2 2 3.3 8e+03 -3.2 0.0 136 164 599 626 588 627 0.77
Sequence Information
- Coding Sequence
- ATGAATcaatattttgatttggaCCAGGGCAAGAATATTGCCTACGTGAATGACTGCTCCAGCACGAGCGGTTATAGCAGTGCAAATTCACCAACATCGATGTCATTGTCGCCCGCCCATTCACCGGAGACGTTGGGGTTAAACAGTGATTTTGCCAACCTCAACTTGCCCGCGTTGTCGAACTCACCTTCACCGCTCTCATACCAGCAGAATCCACCACTGCCGCATCAGCTGCTGACAAATGGCAACCTTGGCATGGCAATTAATGGCGGCGGCATTGGCggtggcggcagcagcaacaataataataatctattaACTGCAAATACAACATTTGGCAACATGTACATGCCGCCAATGGATCACTTTTATGCCGCCGCAAGTCCATATGCGATCAATCCCGTCATGGAACTGGGCTCGGGCGCAGCCGgaggcataaaaaatgaatacacCGCAGAGCTGCACATTGCAGAGCAACCAGTGGAAAAGTTTCGATTTCGCTACAAGAGCGAAATGCACGGCACACATGGCTCGCTGAATGGAATCAATTCGAAGCGTACGCCGAAAACATTTCCGGAGGTTGTGCTGCGCAATTACAAGGGACCAGCTGTCATTCGGTGCAGCCTGTTCCAGACGAATTTGGACAGTCCGCATTCGCATCAGTTGGTGGTGCGCAAGGATGAACGTGATGTTTGTGATCCGCACGATCTGCATCTGTCACAGGATCGTGGCTATGTGGCACAGTTCATCAACATGGGCATCATACACACCGCCAAGAAGTTCATATTCGATGAGCTGCTCAAGAAGAAACAGGACCGTTTGGTCTTTCAAATGAATCGACGTGAACTGTCCACCAAGCAGGTGCAAGAGCTGCACCAGGAGACGGAACGCGAGACCAAGGATATGAATTTAAATCAGGTGCGCCTGTGCTTTGAGGCTTTCAAAATCGAGGAGAACGGCAAAATGACACCAATTACTGCACCAGTCTATAGTAATCCCATCAACAATCGCAAGTCAGCCCAAACCGGCGAATTGCGCATTGTACGGCTGAGCAAACCCACCGGAAGTGTGATGGGCAACGATGAGCTCATACTGCTGGTGGAGAAGGTCAGCAAGAAGAACATTAAAGTGCGCTTCTTTGAGGAGGACGACGATGGTGAGACGGTGTGGGAGGCATATGCGAAGTTCCGCGAATCCGATGTGCATCATCAGTATGCAATTGTTTGCCAGACGCCTGCCTACAAGGACAAGGATGTGGAGCGTGAGGTGGCGGTGTCTATCGAATTGATTCGCCCATCGGACGATGAGCGCTCGTTCCCACCGTTGCCGTTCCGTTACAAGCCACGCGATGCGATTGTCTCACGGAAACGTCGACGCACTTGCTCCACactgaccagcagcagcagtagcagcggtGGCAGTGCACAAAACTCGTTTGAACTGCCCAAGACATTGATGCCGCAATGTCAGGATGTTTCACAACATGACAAGACCATTAGTCAAGATTTTGGACGAGACTTTCTTGTGGATCAGCTTATCAATCCGGATCAATTGATGAATTCCGAGCAATTCCGTAAGTTATTGGAACCAAGCTCGGCCGAGCTGGAAAAACTCTGTGTACCGGGAATACTCGAAACAGATGGTCATGGTCGTGCGGATTCAGCCAGCAGTAGTGATCTGACTACATCAGCTGGGCCACCACGTAATCTAACCAGCCACTACCTGGGCGAAATCTTTAAACTATTTGATGCTACACGACGTGCTGGGGATAATAAGGAACTCTTTGAATCCTCGCGCGAACGGGTCAATAAGCTCTTCACCACACATGCCCGGAAAAATGACAATAACGATACGCTCCTGCATGAGGTGATTAGCCAGCGGGAAGACAATCTCAAGTTGGCGATAAAAACGTTCCAGGTGATGAACTTCTTCAAGCTGCAGGAGCTGGCCAATAATGAACAGAATAAGGAAGGTGACAGTGGCCTCCATGTGGCCTGCCTGCATAACCGTGCCCACTACATACGACCACTGCTAGCATTGGGCTGCAGTCCGAATCAGCAGAATAATGTGGGCAATACGGCATTGCATTTGGCTGTCAAGGATGAGCATATGCCCTGCATCGAGAGCTTCCTGAATGGCGGACCCGCTGTCAAACTGGATCTAACCCTCAAGAATGACGATGGTCTAACACCGTTGCACATGGCCATACGGCAGAATCAATACGATGTGGCCAAGAAGCTAATCAACCATGATCGTAGCTCCATCAATGTCGCCAATACGAAGGACGGCAACAATGCCCTCCACATGGCGGTGCTGGAAGAGAATGTTGAGCTGCTTGTACTCATACTGGATGCACAGAATCTATCGGATATACTGGTGGCTCGAAATGCTGCCGGATGTACGGCCTTAGAGTTGGCTCGTGACAAGGCCAACGATCGCTGTGTGCGGCTGTTGGAGGAGGTGTGTTCGGACAAGGCTGAGCAACCCATGACGTGGATACCATTAAATGTCAAAGAGGAGATGGACTCGTCATCTGCCGAAGAAGACGACGAGAGCAATCCAGATGCAACGTCCATGCATTCGCTGGACATTAAAGAGGAGGAAATCGAAATGGGAGAGGATGAGCAGTTGCCCCCCACGCCGATCGATGATGCCAATAATCAATTGGATCTGCTACTTAAcgataaaatcaaatttgataAACTGGTCAAGTTGCTCAATGAGCCGAGTACACAGAATCCCAAACTACCCAAATGGAAGGAACTGGCCGAGAAATCGGCAATGAATCAACTCGTCTTCCTCTGGTCCAACTCCGAGGGTATGCTCAATTACATTCACCACAAATCGAGTAAAGCCGAGTACAAATCCTTTGCACACGCTCTCCAAGATCTCGGCATGCTGAACAAACTGGAATAG
- Protein Sequence
- MNQYFDLDQGKNIAYVNDCSSTSGYSSANSPTSMSLSPAHSPETLGLNSDFANLNLPALSNSPSPLSYQQNPPLPHQLLTNGNLGMAINGGGIGGGGSSNNNNNLLTANTTFGNMYMPPMDHFYAAASPYAINPVMELGSGAAGGIKNEYTAELHIAEQPVEKFRFRYKSEMHGTHGSLNGINSKRTPKTFPEVVLRNYKGPAVIRCSLFQTNLDSPHSHQLVVRKDERDVCDPHDLHLSQDRGYVAQFINMGIIHTAKKFIFDELLKKKQDRLVFQMNRRELSTKQVQELHQETERETKDMNLNQVRLCFEAFKIEENGKMTPITAPVYSNPINNRKSAQTGELRIVRLSKPTGSVMGNDELILLVEKVSKKNIKVRFFEEDDDGETVWEAYAKFRESDVHHQYAIVCQTPAYKDKDVEREVAVSIELIRPSDDERSFPPLPFRYKPRDAIVSRKRRRTCSTLTSSSSSSGGSAQNSFELPKTLMPQCQDVSQHDKTISQDFGRDFLVDQLINPDQLMNSEQFRKLLEPSSAELEKLCVPGILETDGHGRADSASSSDLTTSAGPPRNLTSHYLGEIFKLFDATRRAGDNKELFESSRERVNKLFTTHARKNDNNDTLLHEVISQREDNLKLAIKTFQVMNFFKLQELANNEQNKEGDSGLHVACLHNRAHYIRPLLALGCSPNQQNNVGNTALHLAVKDEHMPCIESFLNGGPAVKLDLTLKNDDGLTPLHMAIRQNQYDVAKKLINHDRSSINVANTKDGNNALHMAVLEENVELLVLILDAQNLSDILVARNAAGCTALELARDKANDRCVRLLEEVCSDKAEQPMTWIPLNVKEEMDSSSAEEDDESNPDATSMHSLDIKEEEIEMGEDEQLPPTPIDDANNQLDLLLNDKIKFDKLVKLLNEPSTQNPKLPKWKELAEKSAMNQLVFLWSNSEGMLNYIHHKSSKAEYKSFAHALQDLGMLNKLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -