Basic Information

Insect: Linnaemya vulpina
Gene Symbol: RREB1
Assembly: GCA_963675445.1
Location: OY776280.1:32057776-32064088[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.027 3.3 9.6 1.7 1 21 231 251 231 253 0.95

2 14 0.00047 0.056 15.1 0.2 1 23 263 285 263 285 0.98

3 14 0.00011 0.013 17.1 7.3 1 23 291 313 291 313 0.98

4 14 2.5 3e+02 3.4 0.1 1 23 550 574 550 574 0.76

5 14 5.7 6.7e+02 2.3 3.1 2 20 580 598 580 599 0.93

6 14 0.027 3.2 9.6 0.0 1 23 740 762 740 762 0.97

7 14 1.6e-05 0.0019 19.8 1.2 1 23 772 794 772 794 0.99

8 14 0.0012 0.14 13.9 2.0 1 23 800 823 800 823 0.97

9 14 0.0042 0.49 12.2 2.0 1 23 1177 1200 1177 1200 0.95

10 14 0.00025 0.03 16.0 1.0 3 23 1535 1555 1533 1555 0.97

11 14 0.2 24 6.9 6.3 1 23 1561 1584 1561 1584 0.97

12 14 6.8 8e+02 2.1 4.3 1 23 1685 1708 1685 1708 0.92

13 14 0.12 14 7.6 1.1 3 23 1761 1781 1760 1781 0.91

14 14 0.0014 0.17 13.7 5.7 1 23 1787 1809 1787 1809 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.027	3.3	9.6	1.7	1	21	231	251	231	253	0.95
2	14	0.00047	0.056	15.1	0.2	1	23	263	285	263	285	0.98
3	14	0.00011	0.013	17.1	7.3	1	23	291	313	291	313	0.98
4	14	2.5	3e+02	3.4	0.1	1	23	550	574	550	574	0.76
5	14	5.7	6.7e+02	2.3	3.1	2	20	580	598	580	599	0.93
6	14	0.027	3.2	9.6	0.0	1	23	740	762	740	762	0.97
7	14	1.6e-05	0.0019	19.8	1.2	1	23	772	794	772	794	0.99
8	14	0.0012	0.14	13.9	2.0	1	23	800	823	800	823	0.97
9	14	0.0042	0.49	12.2	2.0	1	23	1177	1200	1177	1200	0.95
10	14	0.00025	0.03	16.0	1.0	3	23	1535	1555	1533	1555	0.97
11	14	0.2	24	6.9	6.3	1	23	1561	1584	1561	1584	0.97
12	14	6.8	8e+02	2.1	4.3	1	23	1685	1708	1685	1708	0.92
13	14	0.12	14	7.6	1.1	3	23	1761	1781	1760	1781	0.91
14	14	0.0014	0.17	13.7	5.7	1	23	1787	1809	1787	1809	0.99

Sequence Information

Coding Sequence: atgttggTCGCCACAAATCCCCAACAAACTGGCCAAAACAGTCCGCAAACAACCAGACCAAATACGCCAATCAAAATGGAAAGAAGAGACTCCTCGTCCTCGTATTCGTCGTTGGAAGATTTGGAACAGGAGAGAAAGAAATTGAATGCTGTTACCTCAACGCCGCTGGTGACAACTGAATCCAACAATTCTTGCAAAGCAAATGACAAACCAACTGCAAAATCTCACCAGAGAACGGAGGCAATTGAGCGGCAACAGAATATACACCAGCGTATTCAGGAGTCCGATGAGGCTAACGATTACGATGAGGATGAATCGGCTGATGAGAAACCTACACAACCACGTGAACACTACAAACGTCGTCTCAGTGGTCGTAGCCTATCGGATAAGCCCACCAGTTATTTAGTAGATTATAATGCCAACAACCCCAATTCATTGCGGAAGAAATTCCGCTCCAATCGTTTTGTACTTAACAACGGCGATGAGTCCGGCTTCGTTGATACCAGCAGCAACAGCCAGTTGAGgaatacaacaacaacgacatcaTCATCGTTGGCAGTTACAGCAGCCAACGATTcgaattcgaataataattcgAAATCAAATAGCTCATCGGATTCATCATCGCCGCCCCAAAGCAATGGCAACTCTAGTCCAGAATCAGGTATAGGAGAACGTGAAGATATGAAATACATGTGCCCCATATGCGACGCTGTTTCGCAAACGGCCCATCAATTCACAAATCATATACGTTGTCACAACTACGCCTCGGGGCACACGGAAAATTTCACCTGCCGCATTTGCTCGAAGGTGCTCTCATCTGCCTCATCATTGGATCGCCATGTTCTAGTGCATACGGGAGAACGACCATTCAATTGTAGATATTGTCATCTCACATTTACCACCAACGGGAACATGCATCGTCACATGCGCACCCACAAGCAGCATCAACACACTCATCATCGACGCAACTCGAATGGAACAAAGTTCAgcgcaaacaacaacaataacaactacaataatagcagtaataataataataacacaacaacaacagcagcagcagcaacgaTACCAGCTGCAAACAAAACAGCAATTTTAAGCAACGGACAATTAAATGAAGCCGTCAAATTATCAGCAACAACAGACACAACTTTAAcggcaacaacaacgacaattgGCACAGCTGCAGCAGCAATAACAACGAAGCCAGCATCGCCAACAACAGCGGCAGTGAACACTTCTGACAATAATTACAATCAACAGCCGACAGGTGCTACTGGCGAGCGTTTGAATGGGAACGCCAACTTGGAAAGTTATGAAAGTGATGGCGGCTGCTCATCAGATTCGTCGGCAGGCCATGTCTaccacagcaacaacaacaacaacaacaacaacaacagcaacaatagtAATAACgacaaacaaaataacaataacaacaacaacaataatgattttcacattattaacaacaactacaaaagaaAGCACAGCGACGATGATCGGCCGCAGCAGGATGAACTCGATTCCAAAGAAAACAAGCACGACCTGTTAAAGCGTCGCTTAAGACTTGACGCTTCGAGATCGCCACCTGTCGCctacaacaactacaacgaCTTGTTAAGCCATACAGCAAATGATTCGTTCGTTTGTCCCATTTGCAATGAGAGCGATTTTAGCGATAGTCTGGCTCTCGATCAGCACATTGACAACAAACATCCCAAGATTCCCGCTAAATGCAAACATTGTGGCGTAATTTATCTCACGCAGCATCAGTTTAACATTCACGTCTGTCCGGCAGAGGTGAAAGGATCTCTTAACTTGTCGGTAAAACAGCGTCGCTTAAGTGAAAACCCGAAGCAACATGCGGAAGAAGATCATCGTGATGACACCGAAGAGGCTGCAAGACAAAAGCATGAACTCTTTCAGcatttcaaaaatgttatgGCCCAAAGCAGTTCCCCCTCGCCACATTTCAATCAGGATTTGGCTGAGGACGATATTAAATCTGAGCCATCGGGTCATGATTCAAAAGATTTAGCCGACATTCAATCCATTTTGAATATGACAGCCTCTTCGAGCAACTCGAACTTGCTGAGGAACTTTGAACAGTCAGTGAACACTCCTTCATCCCAGTACAGTTATGACAGGGACGAAGAGGAAGCTCAGGATGCATTCACCTCAGAGTTCCGCAAAATGAAGTTGCGTGGTGAATTTCCCTGCAAGCTCTGTCCGGCCGTGTATCCCAACTTACGTGCTTTGAAAGGACACAATCGCGTGCACTTAAGTGAGGCAGGTTCTGCAGGCCCCTtccgttgcaacatgtgtcctTATTCGATATGTGACAAAGCCGCCTTGATTCGTCATATGCGCACTCACAACGGTGATCGTCCGTATGAGTGTGCCGTGTGCAATTACGCCTTTACAACCAAAGCCAATTGCGAAAGGCATTTGCGCAACCGCCATGCCAAAACTACTCGCGAGGAAGTCAAACGTGCCATAATATATCATCCTTCAGAAGATTCATCCTGCGAGGACACCAACAAAAAGCTGCAAATGTTTTCAGCCGAGCTGGAGGAGGACTACGACTCCATGTCTTATCATCAACACCAGCCAAAGGATCGCTCAACGCCAGTGTCTCACCTTAAGGAGCGCTTGACTGCAGTTGATAGTCCTTCTTCGAAACCAGTGAAGATTCAGGTGAAAAACCTCGAAGATCTTTTGGATAAATCGACAACTTCATCAGGTTACCACGACAGCTACGATAGGCGCAACATTGAATCCTCTCAGGGGCCTATTGACATGAGCATGGATGTTTTGGATTTGAGTAAAAAGCCTAGTGTTCCTCAGCAGCCCGCCCAGGAAGAAAAGCTGGTATCCGCCATGCCTGTGCAATCTTTAGCGCCACCAAATCTTATCAACCCCAGCAGTGAAATTATCAAGAACAAAATAGTTCCCGCGGAAGCCGATCCGAAATCGGACTTATCAGCTTTAGATAAACAGCACCAACAATTGCTCTTAGCTCAACAACAACTGCTCAGTGATCCCAATCAATTACTGCAACAATTATATcgcaacattttgtttcctcAGTTTCCGTCATTCTTTATTCCCAGCACTTTTGGCACCAACTTTGCAGAAATCCAAAAAATCGCCCCTATTCTAACTCGTATGATGGGCGGAGTGGCTGCTGCAACAGCAATGCCTACCAGCGACATTGAAAAGCCATCCACATTAACAACGCCCATGAACTGCAACAGCTCCTCAAGCCTACCGCCCATGAGTCCACAAATACCTGAAAAATCGAATTCGGCAACACTGGATTCCATGTGCTCACCCAAAACTATGCTTTCGCCAAACTCAAATCACTTGCCCATGCCCAGACATATACTGCCCTCCACGGCATCAACTCATTCCCCAAACTTGCTGCCAACAATGCTTTCGAACGGTCCTGTCAAAATGGTGCTCAAAAATGGCGTATTCATGCCGAAGCAAAAGCAAAGGCGTTACCGCACTGAACGCCCCTTTGCCTGTGAGCATTGTTCCGCCCGCTTTACTTTACGCTCAAACATGGAACGTCATGTCAAACAACAGCACCCGCAATTTTATGCTCAACGCCAACGCAGTGGACATCATGTTATGCGCGGCAGAGGAGCAAGCAGTGCTGCCAATATAAATAACATCTCCCACTTTCAGGCTGTAACACAAGCCCACTACAACTCTGCACCGCCTAATCATTCACCCATTTCCGATCAAGTCAAATGTGCGATATTGGCCCAGCAACTCAAGGCTCGCAAGGATACAGATCTCCTACAGCAAGCCTTGGCTCATGGTTCCAACAGTGTAGCCAATTCAAATGTGTTTGCCCAACAAGGCCCAAATCTGATTAATGGGCATTCAAGCTTTTACGCTTTCAATCCCAATCATGGCCATCACCTAAGTCAGAACGGCACTCCCAATGGATCTATGGAAGACGATGAGCCAAAGCTAATAATCGATGAAGATGACGAGGAAGATGAAGACGATGAAGAGGACATTGAAGAAATTCCTGATGATCAGGACGAAGATGAAGAAAACGAATTGGAGTTTAATCACAGTGAAGGCAAACTGGAAGCACGTCATTTGCCAACAACAGTTGAAGAGGTCAAGCTCAAGACCGATAAGTCTGCAGATTCCACCAAGAAAGTCGCCGAGTCTATATTGGAACAAGCCATTAAAGCCAAGCAAACCATAAGCCCTTTCGCCAAAACTTTGGATCATTCGCCGGCAGCCTCTAACAACAGCACAATGAAATCGATGATTGCTCAAGCCCCAGCAGTTGGTAAATTCCTCAAGGACGTGGCGAGTTCTTCATTTAAGGACGAATCTCAAGACTTGGCTTCAGTCTCTGAACTAGTAGACAACGCCACTAACAATTCGGTGTCATTTAACAATTACTTTCGTCCATCTGATGTGGCCAACCACATGGAGCCCAGCGACGAAGATGGCCTGGTCGCCTCCTCAGCCAGCGAGAGCAACAATTCCGGAGCCGAAGATACTGTCAGTACCGAAAAGCCTAAAAAGAAGTCAGCGTACAGTTTGGCACCGAATAGAGTTCACTGTCCCTATTGCCAACGTATGTTTCCATGGTCCAGCTCCCTGAGAAGACACATTCTCACCCATACGGGCCAAAAGCCCTTCAAGTGCTCTCACTGCCCTCTCCTCTTTACCACCAAAAGTAATTGTGACCGCCATCTGTTGCGCAAACATGGAGATGTAGAGTCCGCCGTGTCTGTGTATGTACCAACTGAAGATGTTTCCGAGCCCATTCCTCTGCCCAAGTCAGTCGAAGAAATAGAAAGAATGCAAAGAGAGCGCGAGGAAGAAGAACGCAGACGCAAGGCCGCAGAACAAAGAGAACGCCTAGAAAAAGAGCAGATGGAGAAGCAAAAATTggaacaagaacaacaacaaaagcaggcATTCCTCAAGCAATTGGCCGTTGCACAACTCCAACAGCAGTTCACTCAAAAATCAGAGCCTAATCCCATATCGTCCTCGGAACTGCCTTTCAAATGCCATCTCTGCGAAAACTCATTTTCCGAACGACTACAGTGTTTAGAACACATCAAGTCCATGCACTCCCAAGAGTTTGCTTTGCTGCTATCGAAAGGAGCTATCGAAAACGAAACGGACTCGGCTCTTTTGACATCGAATGAAGAAGATGAACGCCAACGTTCAACCGAAGATTCCTCCAAAGGTGGCAAATATCCCGATTACAGCAACCGCAAAGTTATTTGCGCTTTTTGCATGAGACGTTTCTGGTCCACAGAAGATCTCCGCAGGCATATGCGCACTCACTCGGGCGAAAGACCATTTCAATGTGAGATCTGTTTCCGGAAATTCACCCTCAAGCACAGCATGCTCCGTCACATGAAAAAGCACAACGGCCTGCACATCAACGGCCTCCAATCGAATAGCGACAATTTGACCAACGGCAATTCTGGCTCCGACTACTCGGACGACGAACAAACCCCAAATCCCTTACCAACAGCTGCCCTACCAACACCGAGTGGCAGCATTAATGCCCTACTGATGGGCTCCAAATTCCAAGAGCTTCTGCAAAAAGCTAACGAATGGCGAAATGGCAGTTTGAATGCTCTACGCGATGGCAAAGAAAACCATTTAGAGGAAACATCCACTCCACAGTCATCGGACTTGATTGGCAATTTGCTGGGCATCAGCGATCAGGGAATACTCAACAAGTTGATGTCCTCACCGGATGAAGCAGCCAAATTTTTAGGTGTGGAGAAATAA
Protein Sequence: MLVATNPQQTGQNSPQTTRPNTPIKMERRDSSSSYSSLEDLEQERKKLNAVTSTPLVTTESNNSCKANDKPTAKSHQRTEAIERQQNIHQRIQESDEANDYDEDESADEKPTQPREHYKRRLSGRSLSDKPTSYLVDYNANNPNSLRKKFRSNRFVLNNGDESGFVDTSSNSQLRNTTTTTSSSLAVTAANDSNSNNNSKSNSSSDSSSPPQSNGNSSPESGIGEREDMKYMCPICDAVSQTAHQFTNHIRCHNYASGHTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLTFTTNGNMHRHMRTHKQHQHTHHRRNSNGTKFSANNNNNNYNNSSNNNNNTTTTAAAATIPAANKTAILSNGQLNEAVKLSATTDTTLTATTTTIGTAAAAITTKPASPTTAAVNTSDNNYNQQPTGATGERLNGNANLESYESDGGCSSDSSAGHVYHSNNNNNNNNNSNNSNNDKQNNNNNNNNNDFHIINNNYKRKHSDDDRPQQDELDSKENKHDLLKRRLRLDASRSPPVAYNNYNDLLSHTANDSFVCPICNESDFSDSLALDQHIDNKHPKIPAKCKHCGVIYLTQHQFNIHVCPAEVKGSLNLSVKQRRLSENPKQHAEEDHRDDTEEAARQKHELFQHFKNVMAQSSSPSPHFNQDLAEDDIKSEPSGHDSKDLADIQSILNMTASSSNSNLLRNFEQSVNTPSSQYSYDRDEEEAQDAFTSEFRKMKLRGEFPCKLCPAVYPNLRALKGHNRVHLSEAGSAGPFRCNMCPYSICDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSSCEDTNKKLQMFSAELEEDYDSMSYHQHQPKDRSTPVSHLKERLTAVDSPSSKPVKIQVKNLEDLLDKSTTSSGYHDSYDRRNIESSQGPIDMSMDVLDLSKKPSVPQQPAQEEKLVSAMPVQSLAPPNLINPSSEIIKNKIVPAEADPKSDLSALDKQHQQLLLAQQQLLSDPNQLLQQLYRNILFPQFPSFFIPSTFGTNFAEIQKIAPILTRMMGGVAAATAMPTSDIEKPSTLTTPMNCNSSSSLPPMSPQIPEKSNSATLDSMCSPKTMLSPNSNHLPMPRHILPSTASTHSPNLLPTMLSNGPVKMVLKNGVFMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASSAANINNISHFQAVTQAHYNSAPPNHSPISDQVKCAILAQQLKARKDTDLLQQALAHGSNSVANSNVFAQQGPNLINGHSSFYAFNPNHGHHLSQNGTPNGSMEDDEPKLIIDEDDEEDEDDEEDIEEIPDDQDEDEENELEFNHSEGKLEARHLPTTVEEVKLKTDKSADSTKKVAESILEQAIKAKQTISPFAKTLDHSPAASNNSTMKSMIAQAPAVGKFLKDVASSSFKDESQDLASVSELVDNATNNSVSFNNYFRPSDVANHMEPSDEDGLVASSASESNNSGAEDTVSTEKPKKKSAYSLAPNRVHCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPTEDVSEPIPLPKSVEEIERMQREREEEERRRKAAEQRERLEKEQMEKQKLEQEQQQKQAFLKQLAVAQLQQQFTQKSEPNPISSSELPFKCHLCENSFSERLQCLEHIKSMHSQEFALLLSKGAIENETDSALLTSNEEDERQRSTEDSSKGGKYPDYSNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCEICFRKFTLKHSMLRHMKKHNGLHINGLQSNSDNLTNGNSGSDYSDDEQTPNPLPTAALPTPSGSINALLMGSKFQELLQKANEWRNGSLNALRDGKENHLEETSTPQSSDLIGNLLGISDQGILNKLMSSPDEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00260066;
90% Identity: iTF_00900028;
80% Identity: -