Lvul016628.1
Basic Information
- Insect
- Linnaemya vulpina
- Gene Symbol
- Rel
- Assembly
- GCA_963675445.1
- Location
- OY776277.1:103543911-103547886[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1 2.2e+04 -3.6 0.0 35 66 82 113 78 115 0.68 2 2 6.6e-52 7.2e-48 164.0 1.5 1 168 146 324 146 325 0.92
Sequence Information
- Coding Sequence
- ATGGAAAATATGATGCCACATTTTAGCGTCACAAATGACAAGGACATAACTGATTTAGACACACTGGAGCGTATACGAAGTGTCAGTGAATCCTCTGTAGGTGATACGAGCGGATATAACAGCACAACATCTCCAGGACCAGATAATTCTCCAATTTCAAGTGGATATTCTCCAGTACAATCACCAGATTCCGTTCTACGAACAGAATTTTCGCAGTTACTTATACCACCAACATCTTATCAGCAAAATTCCTTGCAATACGTACAACTACAGAATGTTGAGATGAATATGAATAACCAATCAATGCTATATCAACATAATATGAATTTCTCACCACATTTGAACTTTGTGAATCCtgaaaataatcaattttttcAACAGCCAGTAGCAAGCACAATGTCATATCCAGAAgttaaatatgaatatgaagCAACTTTGCGTATAACGGAGCAACCGGTGGAAAAATTTCGCTTTCGGTACAAGTCGGAAATGCATGGTACACACGGTTCTTTAAATGGAACTAACtcacaaagaaatactaaaacTTTTCCCGAAGTTGAATTGTGTGGTTATAAGGGGCCGGCTATCATACGTTGCAGCCTTTTTCAAACTAATCTTGAAAGCCCGCATTCACATCAGTTGGTGGTACGCAAAGATGACCACGATATATGTGATCCGCATGAATTGAAAGTTTCTCAAGAAGTTGGCTATTTtgctgaatttaaaaatatgggtaTTATACATACGGCAAAGAAATTCATTGTTGaagaattattaaagaaaaagcgAAAACGAATGTGTcgtgattttatgacaataaaaGAAGATCAAGAACTGTGTAAGCAAACAGAAAAGGAAGCAAAGGATATGAACTTAAATCAGGTGCGTCTATGTTTTGAAGCATTCCGTGTGGAAGATAACAACTCATACACACCAATAGCGTCCCCAGTATATTCGAATCCTATTAATAACCGGAAGTCAGCTCAGACTGGAGAACTGCGTATTGTACGATTGAGTATTGCAACGGGTAGCGCTGTTGGCAACGATGACTTGATGTTATTGGTGGAAAAAGTAAGCAAAAAGAACATAAAAGtaaggttttatgaaatgaacGAAGATGAACAAGTGTGGGAGGCTTTTGCTTCATTTCGTGAATCAGATGTGCATCATCAATATGCTATTGTATGTAGAACACCACCTTATAAAgataaagatattgaaaaagctGTTGAAGTATTTATTGAACTCGTTCGACCCTCCGACGACGAACGCAGTTATCCACCAGTCTCATTTCGATATAAGCCAAGTAATGCTGTAATATCACGTAAACGAAGACGAACATGTTCATCTTTTAACAGCGGCTCCTGCAGCAATTCCGGTTCTTTAAGCTCAGGAGAAATACCTAGAACAATTCAAGAACAGCAAAACTCTATAAATATTGAATGTGCGTCAACTGAACTTAAATCAATACTAAATAATACGGATTTTAATAAGTCTGATATTTCTATTGActccaatttattaaaatactttgagGATCCGAAATTAACAGACTTTAACTTCGAAGGGGAGTCATTTAGTAATGCTATCGAAAAGGATGGAATTAGTGCTGGCAGCGACgcaaaaaaatctatgtatcaTTGTAAGAAACAAATGATTAGTAAAAAACAAATGGATATGGCTAGACAAGGTGTGCAACCTCAATCGCCCAATTTGTATTTACAACGCATTCTAAACATATTTCAAGATACAATTAGGTCTGCAGTACCACTGAACTCGACAAGATTTTTCAGTGCTGCTGAACAAATTTCTAAAATCATAAATGAACATTCAGAAAAATACGGAGATTCTCTAATACACGAAATCGTGCTTTCGAATAACAGCAAACTTGCTATACcgatttttaagattttgggatattttaaattaaatgaactgTTAAATAGTGCTGTAAACAAACAATCACAAACTGCATTACATTATTCCTGTTTTTATGGACAACCCAACTATATAAGGCCTCTTTTAAAATTGGGCTGCAATCCTAATATCCAAGATGTCGACGGTAATACAGCACTTCATATTGCTGTGTCTGAGAAGCAATTGAAATGCTTAGAAAGTTTTATAAAGTCGGAAATGCCTTTAAATTTGAATCATTTAAATGACGATGGATTTACTCCCCTACATTTAGCAGTACGTGATAACAATTATGACATtgttgcaaaattattaaaattcgatGCAACCACAGCAATAACGCCAAGCAGTAAAGATGGCAGTACTGCTTTACATATGGCTGTACAgcaacaaaatctaaaattagtAAATGTAATATTAGATACTGAACACTTCATAGCTTCTATATTATATGCAACTAATAGGGCTGGTTATACTCCATTGGATTTGGCTAAACAGCTGATTGCAAGCGGAGATCAGGGCAAAGAAATTCTAAATGTACTTGTTccattttatgacaaatatCCACGCCCTGACAAAACACAAGAAATGGATGTAAATACATATGACGATAAtctagacgaagtgcacgaagtcattataaaagaagaagaaaattcaTGTTCATCTACTGAGGATGATGAAGACGACAACACCATTGCAACAGAGTTGCATGTCAGGACTATAGAAGATTCTTGTAAATCGAATCCTAAAATAACAAAAGAGTTTGAGATAAAACTTGAAGTCTTTGACGATGACGCTATTAGCATCCTCAATATATCTGAGGTGGAAAAAGCTTTGaatgataaaacaattttttttaaactctgccATGAACTAAACTTtaatgaaaaatggaaaaagttaGCAAACGAAATGGAACTGccgcatttttatttaacaaatgcTGAAGCTTTTCTCAATTCATTGAAACGCAACATAAATAGCATATGTTGTAACCGATTAACTTTAGCTCTGAGGGATATTGACGAAAACTtgattgaaattataaaaaactaa
- Protein Sequence
- MENMMPHFSVTNDKDITDLDTLERIRSVSESSVGDTSGYNSTTSPGPDNSPISSGYSPVQSPDSVLRTEFSQLLIPPTSYQQNSLQYVQLQNVEMNMNNQSMLYQHNMNFSPHLNFVNPENNQFFQQPVASTMSYPEVKYEYEATLRITEQPVEKFRFRYKSEMHGTHGSLNGTNSQRNTKTFPEVELCGYKGPAIIRCSLFQTNLESPHSHQLVVRKDDHDICDPHELKVSQEVGYFAEFKNMGIIHTAKKFIVEELLKKKRKRMCRDFMTIKEDQELCKQTEKEAKDMNLNQVRLCFEAFRVEDNNSYTPIASPVYSNPINNRKSAQTGELRIVRLSIATGSAVGNDDLMLLVEKVSKKNIKVRFYEMNEDEQVWEAFASFRESDVHHQYAIVCRTPPYKDKDIEKAVEVFIELVRPSDDERSYPPVSFRYKPSNAVISRKRRRTCSSFNSGSCSNSGSLSSGEIPRTIQEQQNSINIECASTELKSILNNTDFNKSDISIDSNLLKYFEDPKLTDFNFEGESFSNAIEKDGISAGSDAKKSMYHCKKQMISKKQMDMARQGVQPQSPNLYLQRILNIFQDTIRSAVPLNSTRFFSAAEQISKIINEHSEKYGDSLIHEIVLSNNSKLAIPIFKILGYFKLNELLNSAVNKQSQTALHYSCFYGQPNYIRPLLKLGCNPNIQDVDGNTALHIAVSEKQLKCLESFIKSEMPLNLNHLNDDGFTPLHLAVRDNNYDIVAKLLKFDATTAITPSSKDGSTALHMAVQQQNLKLVNVILDTEHFIASILYATNRAGYTPLDLAKQLIASGDQGKEILNVLVPFYDKYPRPDKTQEMDVNTYDDNLDEVHEVIIKEEENSCSSTEDDEDDNTIATELHVRTIEDSCKSNPKITKEFEIKLEVFDDDAISILNISEVEKALNDKTIFFKLCHELNFNEKWKKLANEMELPHFYLTNAEAFLNSLKRNINSICCNRLTLALRDIDENLIEIIKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01398202;
- 90% Identity
- iTF_00899296;
- 80% Identity
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