Basic Information

Insect: Linnaemya tessellans
Gene Symbol: -
Assembly: GCA_951800035.1
Location: OX637536.1:2520824-2526952[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.65 1.2e+02 5.2 1.5 1 23 263 286 263 286 0.88

2 25 9.3e-07 0.00017 23.6 0.5 1 23 292 315 292 315 0.97

3 25 0.0072 1.3 11.3 1.2 2 20 345 363 344 366 0.92

4 25 0.0056 1 11.7 1.2 1 23 443 466 443 466 0.96

5 25 0.13 25 7.3 1.0 2 23 474 495 473 495 0.97

6 25 0.00092 0.17 14.2 1.2 2 23 540 561 539 561 0.97

7 25 0.083 15 8.0 0.7 2 20 574 592 573 595 0.94

8 25 0.00064 0.12 14.7 1.0 1 23 674 697 674 697 0.93

9 25 0.003 0.56 12.5 0.3 1 20 704 723 704 725 0.95

10 25 0.025 4.6 9.7 0.7 2 23 737 759 736 759 0.94

11 25 0.00035 0.066 15.5 0.4 2 23 774 795 773 795 0.97

12 25 6.3e-07 0.00012 24.1 2.8 1 23 801 823 801 823 0.98

13 25 0.039 7.3 9.0 2.3 1 23 966 990 966 990 0.95

14 25 5.9 1.1e+03 2.2 1.3 1 23 1027 1050 1027 1050 0.92

15 25 0.011 2 10.8 4.6 1 23 1060 1082 1060 1083 0.95

16 25 0.0086 1.6 11.1 3.6 1 23 1090 1112 1090 1112 0.97

17 25 0.026 4.9 9.6 0.8 2 20 1139 1157 1138 1159 0.92

18 25 0.003 0.56 12.5 5.7 1 23 1212 1235 1212 1235 0.97

19 25 0.024 4.5 9.7 2.2 1 23 1272 1295 1272 1295 0.97

20 25 0.065 12 8.3 6.2 1 23 1327 1350 1327 1350 0.97

21 25 6e-07 0.00011 24.2 0.8 2 23 1380 1401 1379 1401 0.95

22 25 4.6e-06 0.00085 21.4 0.4 1 23 1407 1429 1407 1429 0.99

23 25 5.8e-05 0.011 17.9 2.4 1 23 1435 1457 1435 1457 0.97

24 25 6.7e-06 0.0012 20.9 1.7 1 23 1463 1485 1463 1485 0.99

25 25 0.026 4.8 9.6 0.9 1 22 1491 1512 1491 1515 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.65	1.2e+02	5.2	1.5	1	23	263	286	263	286	0.88
2	25	9.3e-07	0.00017	23.6	0.5	1	23	292	315	292	315	0.97
3	25	0.0072	1.3	11.3	1.2	2	20	345	363	344	366	0.92
4	25	0.0056	1	11.7	1.2	1	23	443	466	443	466	0.96
5	25	0.13	25	7.3	1.0	2	23	474	495	473	495	0.97
6	25	0.00092	0.17	14.2	1.2	2	23	540	561	539	561	0.97
7	25	0.083	15	8.0	0.7	2	20	574	592	573	595	0.94
8	25	0.00064	0.12	14.7	1.0	1	23	674	697	674	697	0.93
9	25	0.003	0.56	12.5	0.3	1	20	704	723	704	725	0.95
10	25	0.025	4.6	9.7	0.7	2	23	737	759	736	759	0.94
11	25	0.00035	0.066	15.5	0.4	2	23	774	795	773	795	0.97
12	25	6.3e-07	0.00012	24.1	2.8	1	23	801	823	801	823	0.98
13	25	0.039	7.3	9.0	2.3	1	23	966	990	966	990	0.95
14	25	5.9	1.1e+03	2.2	1.3	1	23	1027	1050	1027	1050	0.92
15	25	0.011	2	10.8	4.6	1	23	1060	1082	1060	1083	0.95
16	25	0.0086	1.6	11.1	3.6	1	23	1090	1112	1090	1112	0.97
17	25	0.026	4.9	9.6	0.8	2	20	1139	1157	1138	1159	0.92
18	25	0.003	0.56	12.5	5.7	1	23	1212	1235	1212	1235	0.97
19	25	0.024	4.5	9.7	2.2	1	23	1272	1295	1272	1295	0.97
20	25	0.065	12	8.3	6.2	1	23	1327	1350	1327	1350	0.97
21	25	6e-07	0.00011	24.2	0.8	2	23	1380	1401	1379	1401	0.95
22	25	4.6e-06	0.00085	21.4	0.4	1	23	1407	1429	1407	1429	0.99
23	25	5.8e-05	0.011	17.9	2.4	1	23	1435	1457	1435	1457	0.97
24	25	6.7e-06	0.0012	20.9	1.7	1	23	1463	1485	1463	1485	0.99
25	25	0.026	4.8	9.6	0.9	1	22	1491	1512	1491	1515	0.90

Sequence Information

Coding Sequence: ATGACCGATGATATAAAAACTGAATGTTTTATAAATGGAGTACAATATAAATGTCGAACTTGCTTTGATCCTGGACGAACAGTTTGCGCTCTTACGGATGAAAGCAGCAACACAAAAAAATGGATTGATTTATTAAAGGATATCCTTCGCTTACagacaGCCGACGATGATTTACTTCCAAATACAATTTGCAGCAAATGTACggctaaaattaaaagttcctACGATTTTATACATCAGGTTTATGATGTGAACACAAAATATGCTCAATTATTAGCTGAGAGCAACGATCCTCTAGAAGGTGGAACTGCAAATGTTCTGGATAATTTGAACGATTGCTTAGCTGAATCAACAATTGATTTACCACTGAACCAGTACATGCCAGAAATTAAGATAGAAGAAGATTTCCCAGATTCATATAAGgttaatttaaataacattcatTCTGTGGAAAGAGAAGCAAAATTGGAAGACGACGGTTTGAGAGCATCCGAGGACTCTGTAGGAGATCATGAAGAATTTTTGTCTGCATCCGAACAAATGGAAGAGAGCAAAACAAGATCCGTTAAAAAACGAAGATCGCGAAGCTTATGTGATGTTGTTAATGACAATGATTATAGAAATGAATCCGGtaCGTCATCCAATGAAAGCGATTATATTCCATTAAAgagattaaaaaaagaaaaagtcaacaaaagtATTACTGGTAGCAGTCAGCCAATTAAAAGGAAGCAAGGTCGGCAAGCTCCAGACTATTacgataaaattgaaaaagttaaCGATCGTTTTTTATGTCTTAtatgtcaaaaaactttttcgtTAAGAAAAGATTGTGGTCGTCATATCGCATCAATTCATTTACGCCGAACACCATTCCCTTGCGAAATTTGTGGACAAAGTTTCGGACGCAAGGACAAGTTGCAAAGACACGTTCGACGTATGCATTCTGCTGGAGCAAGCTATCCACCTAATCATAAGGAATGGTTATTTGGTGATCGTTTATATTGCAAACCAGGTGCTTGGACTATTGTGCAATGCAAGTTGTGTAATGCGAAATTTAGAACGACTAAAGATCTTCGTAACCATTTGCCAAAACACAGTAATTTAGACAGTCTTCATAAAATAGAATTAACCAGTGACTGTGTCCAACATTTGTTTGGAAATATGATTAATTTGAATCGAGTCAAGGAAAACATTTGCAAAGATATTCGAGAAAAACATTGGTTCAAATACTACActgtattaaacaaatattcttaTGAAATGTCCATAAGTGATACAGAAGCTGAAGATTTGGTAGACGAAACTGCAGAGTTTGCTGAAAGATATAAGTGTGATTTGTGCGCAAAGgacttttcttttaaatatcaaGTTTTTTCTCATTTAAAGGAAGCTCATAGCGAAGATGATATATCTTTAAAGTGCAATCTTTGCAAACtagaatttatttcaattagaaTGTACGAACAACATTCTAAAACTCATTGCCGTAATAGACATAAGGTTTTGCTTTGTGCACATTGTCCGGCTAAGTTTGTTTGGcctgaaaatatgaaaaatcatAATTGCGCAACCAAACTTCAACTGATCCCACCGGCACCGACTAAAGAGCAAATGAAGTGCAATATATGCGACCGTAAATTCGAGGTAAAGACGAAATATGAAAAGCATTTGGGAACTCATAAAGATGGAAGGATTGCTTCTGCCAAAACTATAATACGTTGTGGTCTCTGTGCACATACCTTCGAAAAACTGAGAAATCTGCGTCAACACATGCCTTTGCATGCCGACGGCAAAACTGGTATAGACTTTCATGGCAGTATTTATGTAAAACGTTTTGAACGTTCGAAATCAATTGACTTTGCTTTACTGCAACAGGAAATACAAAACGCTTATAGAAAATCTCAAATTAGTCGATTTTACCGAGCAATTGACATGGACGGAAATGAAATGGACATTTTAGATTCGGATAGTGACTCGGAAGAAGCTAATTCTAATGAGGGAATTGAAGAAAAGGAATATAAGTGCCAACTCTGCGGTGCAGTATATAAAAGGCGTAAGCTCTTATTAAATCATCAATTTGAACAACACAATGGTGTACCATTGCCTTTTACCTGTAAAGACTGTACTCAACAATACGTAAGTAATGATTTGCTACAGCAGCATTTAGTAAGAGATTGTTGGAATGAACACCGACGAATAGCTCAACAATGTGACTATTGCAATGCTCGTTTCATTTGGCAGAACAATCTTCGAAAACATAAAGAAATTCAGCATAAAAACCAGAAACTCTCAAAACCTCAAAGAGCCAGTACTCTGAAATGTGAGTATTGTGAAAAGGTGTTCATATGGCCAAAAGATTTAGTGCGTCACAGAAAAACGCATACCGAAGGGAAAAAATTTACGTGTCCTCATTGCGATCGAAAATTTCAACGAAAAGACAATTTATTGACACACATAAGAATACATTGCCCTGATGGCATACCAACTGTTTCAAATCCGGGTAAAAGTATCGATTACATTCTACCACATTTAATAAAGCCGCATGGATGCAAACGGATCAAATGCATGATTTGTTTTTCAGAACACAATCGCATTCGCGACTTACGATCTCATTTGCGAACGCATCGGTATACTGTTAATTTcgataaaagaaaagaaatcgaATATTTGGATGTTATATCATCACAACTCTATCCCGATGAGCCTCAGCCTTTGCCAGAAGAGATGTTGAAAAAACGTATTGGATTTGATATCGCAGCTGAAAATAATTTGGAACGTTTTTACTCTATAACAAATGAAAATGGTTACGAAGTTTCTTTAGACAGTTCTGAGACAGAAAGTGATACTGATGATAACGATACAGATGAAGAATACAATAAATCTAAACGTATTTATAAATGCGATCTATGCCCTGAATTGAGTTTTAATCGTAAATATAAACTGTTCGCCCATCAAAGTCATGAGCACAAATGGGAAGAAGCTCGGCATGTTTGTATACACTGCAACGGACGATTTCTTTCGTCATATATACTTCAGGTACACTACAAGGATCAAtgtaaaaatactaaaaaacgTCACTTTTGTCGTCGCTGTCCACTGCGTTTCATGTGGAAAACTAATATGAAGGCTCACATCGTAATGGAACATGGCCATGAAATCGATTCAAATCGAGGTCATGAATGTTTTCTCTGTCAAGAAAAGTTTTTCCCCCAGAAGGAGCTTAAACGTCATTTGATCACACATCATTCTGCCGATGCTGAACTTCATTATTGCTTACTTTGCCCAAAAACATTCTTTAGCGTAGAACATCTCAATGATCATTTGAGCCGCCATCGCTTGACTACAGCGGATGTCAAAACCGTCGAAAGTATAATACATTCCACATGCTGGCCAAACGGAGAAAAATCTATTAAATGCAAATTATGTCAGCTTACCTTTGAAACAATGGCCCATTTAAAGGAACATTTTTCAACTAGAAACCCACAAAATTTGTGTGGGAGTCAACATTCGTTGGCAAATTACACAATTACTAATCAAAAGGGATTCGAACTACATTTGGAGCTAGACTCTGAAACAGAAGCAGAAGCTGATGTGGAACAAAGCAAAAGTCACAAAAACACACTTTACCCCTATAACTGCTGTATGTGCAGTATGTCGTTTAAAAGGAAATATCAAATGTCTCAACATCAGCGATCATTGCATAATTATGAATTGCTAGTGTTAAAGTGTGAACGTTGTATCTTTAGGACAGTTTCACAGaaaGTTTTAGATTATCATAAGGGCACACAGTGTTTCAACACTGAAAAACATTTCGAATGTGAACACTGCAAATTCAAATTTATGTGGCAAGAAAATCTAGAAAACCACATTTCTATGTTTCATGGTGAAAAGAAGTTGTCCAGAGCAACTGATGTTGTATACATGACGTCTTCTATTGAACCTGTGCCAACCAGTATCAAAAACGATACCAATATTTTTGAATGTATGGACTGTCATCGTCGTTACAATCGTAAAGATCGATATAaagcacattttaaaaaattccacaACAATGATTTACACTTGACGAcagacaaaaatatttgtaataggAAAGTTCGAAAACAGTCGGCAGCGAAagtagataaaaaatttttgtgtgcttttTGTGGTCTCTCTTTCTCAAACAATTCAAATCTTACGGTACACATGAGAAGGCATACAGGAGAGAAACCATACAAGTGTGATCTCTGTGAAATGGCTTTTCCGCGTACATCTGATTTACAAGCTCACCGACGCACACATACTGGCGAGCGtccttttaaatgtatttactgcGACAAATCATTTTCACGacaatataaattaaacgtTCACAATCGCATACACACCGGCGAACGTCCATATGAGTGCACGTTTTGTCAGAAATCATTTATACAGTCGAATGACTTGACACTACATTTGCGACGACATACAGGTGAAAGGCCTTATACATGTGACATTTGCGGTGAAGGCTTTATATGTGCTACATCTCTTAAACAGCACCGCAGCTCTAAAGGacatcaggaagaaaaaaatgaTTCAAAAATTAGTATGCAAGAGTTGTCCAGCTTTGATATGAAATTCTAG
Protein Sequence: MTDDIKTECFINGVQYKCRTCFDPGRTVCALTDESSNTKKWIDLLKDILRLQTADDDLLPNTICSKCTAKIKSSYDFIHQVYDVNTKYAQLLAESNDPLEGGTANVLDNLNDCLAESTIDLPLNQYMPEIKIEEDFPDSYKVNLNNIHSVEREAKLEDDGLRASEDSVGDHEEFLSASEQMEESKTRSVKKRRSRSLCDVVNDNDYRNESGTSSNESDYIPLKRLKKEKVNKSITGSSQPIKRKQGRQAPDYYDKIEKVNDRFLCLICQKTFSLRKDCGRHIASIHLRRTPFPCEICGQSFGRKDKLQRHVRRMHSAGASYPPNHKEWLFGDRLYCKPGAWTIVQCKLCNAKFRTTKDLRNHLPKHSNLDSLHKIELTSDCVQHLFGNMINLNRVKENICKDIREKHWFKYYTVLNKYSYEMSISDTEAEDLVDETAEFAERYKCDLCAKDFSFKYQVFSHLKEAHSEDDISLKCNLCKLEFISIRMYEQHSKTHCRNRHKVLLCAHCPAKFVWPENMKNHNCATKLQLIPPAPTKEQMKCNICDRKFEVKTKYEKHLGTHKDGRIASAKTIIRCGLCAHTFEKLRNLRQHMPLHADGKTGIDFHGSIYVKRFERSKSIDFALLQQEIQNAYRKSQISRFYRAIDMDGNEMDILDSDSDSEEANSNEGIEEKEYKCQLCGAVYKRRKLLLNHQFEQHNGVPLPFTCKDCTQQYVSNDLLQQHLVRDCWNEHRRIAQQCDYCNARFIWQNNLRKHKEIQHKNQKLSKPQRASTLKCEYCEKVFIWPKDLVRHRKTHTEGKKFTCPHCDRKFQRKDNLLTHIRIHCPDGIPTVSNPGKSIDYILPHLIKPHGCKRIKCMICFSEHNRIRDLRSHLRTHRYTVNFDKRKEIEYLDVISSQLYPDEPQPLPEEMLKKRIGFDIAAENNLERFYSITNENGYEVSLDSSETESDTDDNDTDEEYNKSKRIYKCDLCPELSFNRKYKLFAHQSHEHKWEEARHVCIHCNGRFLSSYILQVHYKDQCKNTKKRHFCRRCPLRFMWKTNMKAHIVMEHGHEIDSNRGHECFLCQEKFFPQKELKRHLITHHSADAELHYCLLCPKTFFSVEHLNDHLSRHRLTTADVKTVESIIHSTCWPNGEKSIKCKLCQLTFETMAHLKEHFSTRNPQNLCGSQHSLANYTITNQKGFELHLELDSETEAEADVEQSKSHKNTLYPYNCCMCSMSFKRKYQMSQHQRSLHNYELLVLKCERCIFRTVSQKVLDYHKGTQCFNTEKHFECEHCKFKFMWQENLENHISMFHGEKKLSRATDVVYMTSSIEPVPTSIKNDTNIFECMDCHRRYNRKDRYKAHFKKFHNNDLHLTTDKNICNRKVRKQSAAKVDKKFLCAFCGLSFSNNSNLTVHMRRHTGEKPYKCDLCEMAFPRTSDLQAHRRTHTGERPFKCIYCDKSFSRQYKLNVHNRIHTGERPYECTFCQKSFIQSNDLTLHLRRHTGERPYTCDICGEGFICATSLKQHRSSKGHQEEKNDSKISMQELSSFDMKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00900821;
90% Identity: -
80% Identity: -