Ltes044219.1
Basic Information
- Insect
- Linnaemya tessellans
- Gene Symbol
- pol
- Assembly
- GCA_951800035.1
- Location
- OX637535.1:89921606-89930187[+]
Transcription Factor Domain
- TF Family
- IRF
- Domain
- IRF domain
- PFAM
- PF00605
- TF Group
- Helix-turn-helix
- Description
- This family of transcription factors are important in the regulation of interferons in response to infection by virus and in the regulation of interferon-inducible genes. Three of the five conserved tryptophan residues bind to DNA.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.00039 25 7.0 0.0 20 72 310 364 303 367 0.89 2 5 0.55 3.6e+04 -3.1 0.0 65 78 457 470 439 474 0.66 3 5 0.00039 25 7.0 0.0 20 72 579 633 572 636 0.89 4 5 0.54 3.5e+04 -3.1 0.0 65 78 726 739 707 743 0.67 5 5 0.00035 23 7.2 0.0 20 72 848 902 841 909 0.89
Sequence Information
- Coding Sequence
- atgcaGGAAAATAATAGAATAGGTCCTTTGCCTTTCACTACAACGATAGAAGCAAGCATTAGAACAACTTGCAAGGACCCAATGTGGACGAAACAATATCCTGGAAATATGAACGATGTTGAATTCgttaataatgaaattgaaaaattattaaaagatggGATAATCCAAAGAAGCTTTAGTCCCTACAATGCCCCAATGTTAACAGTACATAAAACAGGAGTCGACGAAAGCGGAAAACCTAAAAGAAGAATGGTGATAGATTTCCGTAAACCAAATGAACAAACAGTTACAGACAGGTATTTCATCCCTGATGTAAATACAACGTTACAAAACCTAGGAAAAGCTAAATTCTTTACAACATTAGATTTAGAATCTGGCTTCCACCAAATTAGAACTAAAGAAAGTGACAGGGAAAAaactagagttgtacaaaacagctcttttgggagccgtacaactctagaaAAAACGGCTTTTTGTGTAAATGGAGGCAAGTATGTATTCATACGTATGCCTTTCGGCTTGAAGAATGCACCTTCAATTTTCCAACGTTGTGTAGACGACATATTAAGGGAATTCATAGACTTGAGAGGATTTTTAGGATTAACAGGTTATTATCGTAGATTTGTAAAAGACTACGCCCAGATTACAAAACCTCTAACTATACATTTAAAAGCAGAAAATGCACATGTAGGAAAGAATAAAAGTGCAAATAAGGAAGTTAAATTAGACCAGGCAGCCATAGCAgctgtagaaaaattaaaattaaatttaaaagaacagGTGGAGTTATTCCAACCAGATTTTAAAAAACCTTTTGAATTAACAACGGACGCATCCAACATAGCTATTGGAGCCGTGTTAAGCCAAAATAAAAACCCCATTTATTTCTTATCAAGAACTTTGAGTGAAACAGAACAGAGATACAGCACAAACGAAAAAGAATTATTGGCCATAATATGGGCCCTACAAAAACTGAGGAATTATATATACGGCATAGCCGACCTCACTATTTTCACAGACCATCAATCTTTAACCTACGCCATTTCGGAAAAGAATCCTAACCCTAAATTAAAACGCTGGAAAGCCATAATAGGAGATGACGGTGCTAAAATGAAATACAAGCCAGGCACAGAGAATGTAGTAGCTGATGCATTGTCTCGACAGATTATGAACACATCGTCAATTGACACCATGCATTCAGCCGAAAGCTCACATAGTGAAGCAATCAAATCAATCTCACAACCATTTAATTCCTACGGTATACAAATAGAATTAGTACCAACAGAAAGTTTAGTAGAAACACGAGTACGAACTATTTTCTCCGGAAAAATACGATacaccattaatttttttaacaatgataATCTAACAactgaattaaaaacaaACTTGAGAGGATTTTTAGGATTAACAGGTTATTATCGTAGATTTGTAAAAGACTACGCCCAGATTACAAAACCTCTAACTATACATTTAAAAGCAGAAAATGCACATGTAGGAAAGAATAAAAGTGCAAATAAGGAAGTTAAATTAGACCAGGCAGCCATAGCAgctgtagaaaaattaaaattaaatttaaaagaacagGTGGAGTTATTCCAACCAGATTTTAAAAAACCTTTTGAATTAACAACGGACGCATCCAACATAGCTATTGGAGCCGTGTTAAGCCAAAATAAAAACCCCATTTATTTCTTATCAAGAACTTTGAGTGAAACAGAACAGAGATACAGCACAAACGAAAAAGAATTATTGGCCATAATATGGGCCCTACAAAAACTGAGGAATTATATATACGGCATAGCCGACCTCACTATTTTCACAGACCATCAATCTTTAACCTACGCCATTTCGGAAAAGAATCCTAACCCTAAATTAAAACGCTGGAAAGCCATAATAGGAGATGACGGTGCTAAAATGAAATACAAGCCAGGCACAGAGAATGTAGTAGCTGATGCATTGTCTCGACAGATTATGAACACATCGTCAATTGACACCATGCATTCAGCCGAAAGCTCACATAGTGAAGCAATCAAATCAGTCTCACAACCATTTAATTCCTACGGTATACAAATAGAATTAGTACCAACAGAAAGTTTAGTAGAAACACGAGTACGAACTATTTTCTCCGGAAAAATACGATacaccattaatttttttaacaatgataATCTAACAactgaattaaaaacaaACTTGAGAGGATTTTTAGGATTAACAGGTTATTATCGTAGATTTGTAAAAGACTACGCCCAGATTACAAAACCTCTAACTATACATTTAAAAGCAGAAAATGCACATGTAGGAAAGAATAAAAGTGCAAATAAGGAAGTTAAATTAGACCAGGCAGCCATAGCAgctgtagaaaaattaaaattaaatttaaaagaacagGTGGAGTTATTCCAACCAGATTTTAAAAAACCTTTTGAATTAACAACGGACGCATCCAACATAGCTATTGGAGCCGTGTTAAGCCAAAATAAAAACCCCATTTATTTCTTATCAAGAACTTTGAGTGAAACAGAACAGAGATACAGCACAAACGAAAAAGAATTATTGGCCATAATATGGGCCCTACAAAAACTGAGGAATTATATATACGGCATAGCCGACCTCACTATTTTCACAGACCATCAATCTTTAACCTACGCCATTTCGGAAAAGAATCCTAACCCTAAATTAAAACGCTGGAAAGCCATAATAGAAGATTACGGTGCTAAAATGAAATACAAGCCAGGCACAGAGAATGTAGTAGCTGATGCATTGTCTCGACAGATTATAAACACATCGTCAATTGACACCATGCATTCAGCCGAAAGCTCACATAGTGAAGCAATCAAATCAGTCTCACAACCATTTAATTCCTACGGTATACAAATAGAATTAGTACCAACAGAAAGTTTAGTAGAAACACGAGTACGAACTATTTTCTCCGGAAAAATACGATacaccattaatttttttaacaatgataATCTAACAactgaattaaaaacaagtaaaaacgttatattcgaccgggtcgaatcttaa
- Protein Sequence
- MQENNRIGPLPFTTTIEASIRTTCKDPMWTKQYPGNMNDVEFVNNEIEKLLKDGIIQRSFSPYNAPMLTVHKTGVDESGKPKRRMVIDFRKPNEQTVTDRYFIPDVNTTLQNLGKAKFFTTLDLESGFHQIRTKESDREKTRVVQNSSFGSRTTLEKTAFCVNGGKYVFIRMPFGLKNAPSIFQRCVDDILREFIDLRGFLGLTGYYRRFVKDYAQITKPLTIHLKAENAHVGKNKSANKEVKLDQAAIAAVEKLKLNLKEQVELFQPDFKKPFELTTDASNIAIGAVLSQNKNPIYFLSRTLSETEQRYSTNEKELLAIIWALQKLRNYIYGIADLTIFTDHQSLTYAISEKNPNPKLKRWKAIIGDDGAKMKYKPGTENVVADALSRQIMNTSSIDTMHSAESSHSEAIKSISQPFNSYGIQIELVPTESLVETRVRTIFSGKIRYTINFFNNDNLTTELKTNLRGFLGLTGYYRRFVKDYAQITKPLTIHLKAENAHVGKNKSANKEVKLDQAAIAAVEKLKLNLKEQVELFQPDFKKPFELTTDASNIAIGAVLSQNKNPIYFLSRTLSETEQRYSTNEKELLAIIWALQKLRNYIYGIADLTIFTDHQSLTYAISEKNPNPKLKRWKAIIGDDGAKMKYKPGTENVVADALSRQIMNTSSIDTMHSAESSHSEAIKSVSQPFNSYGIQIELVPTESLVETRVRTIFSGKIRYTINFFNNDNLTTELKTNLRGFLGLTGYYRRFVKDYAQITKPLTIHLKAENAHVGKNKSANKEVKLDQAAIAAVEKLKLNLKEQVELFQPDFKKPFELTTDASNIAIGAVLSQNKNPIYFLSRTLSETEQRYSTNEKELLAIIWALQKLRNYIYGIADLTIFTDHQSLTYAISEKNPNPKLKRWKAIIEDYGAKMKYKPGTENVVADALSRQIINTSSIDTMHSAESSHSEAIKSVSQPFNSYGIQIELVPTESLVETRVRTIFSGKIRYTINFFNNDNLTTELKTSKNVIFDRVES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -