Ltes026793.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Linnaemya tessellans
Gene Symbol
dl
Assembly
GCA_951800035.1
Location
OX637533.1:116697535-116702807[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.9 5e+04 -4.2 1.9 109 133 8 32 4 40 0.50
2 3 1.4e-74 1.8e-70 238.1 0.1 1 169 45 215 45 215 0.99
3 3 1.8 2.3e+04 -3.1 0.0 65 78 556 570 552 600 0.60

Sequence Information

Coding Sequence
ATGGATCcaatacaacaacagcagcagcaacaacgacagcaacaaaatataaattataatggcATGCAAACACAACAACAGCGGCAGCAGCAGCCAACGAATAACAGTAAAAATGTACGCAAAAAAGCCTACGTGAAAATAATTGAGCAGCCGGCCGGTAAAGCTTTAAGATTTCGTTACGAATGCGAAGGTCGTTCAGCGGGTTCTATACCGGGTGTTAATTCGACACCAGAAACTAAAACATATCCCACCATAGAGATCGTAGGCTTTAAAGGACGTGCCGTAGTTGTTGTTTCGTGTGTCACCAAAGATCAGCCCTACAGACCTCATCCTCATAATCTAGTCGGAAAAGAGGGTTGCAAGAAAGGTGTCTGTACCCTGGAAATCAACTCGGAAACCATGAGGGCTGTATTTAGCAACCTGGGCATACAGTGCGTCAAGAAGAAGGACATAGAGGCGGCACTTAAAGCCCGAGAAGAAATTCGTGTAGATCCTTTCAAAACTGGATTTACGCATCGATTTCAACCCTCTAGTATTGATTTAAATTCGGTAAGATTGTGTTTCCAAGTGTTCATGGAAAGCGATCAAAAGGGCTCTTTTACACAGCCCTTAGCACCGGTGGTTTCCGAACCCATATACGACAAAAAGGCCATGTGCGATCTGGTCATTTGTCGTTTATGTAGCTGTTCGGCAACGGTGCTGGGTAacacacaaataattttgttgtgcGAAAAAGTAGCCAAAGACGATATTTCCGTGCGTTTTTATGAAGAAAACAATGGCCAAACAATATGGGAGGCATTTGGAGAATTCCAACACACCGATGTACACAAACAGACTGCCATAGCGTTTAAAACGCCACGATATCGCAAGATCGATATAACTGAACCTGCGAAGgTGTTTGTACAACTGAAACGACCATCGGATGGCATTACGAGTGAAGCACTGCAATTCGAATATCTACCCTTGGATTCAGatcccGCACATTTGAAACGTAAACGTAAAAAAGCTAACGGAGATCCCCTACATTTGGTACTACAACAACAGAATAATCAACACGGAAATGATCGCCAAGGTGGTGGTCAAACAAACATAAATTGCTGGAATGGAACGAACACACCCGCTGAAATCAAAACGGAACCAAGagATGTATCACCACAAGCATGTGGCATGTATCCGATTCCACCGAACCTAACACCATCACCCCAGCCACTGTCACCATCCAACGCGTATACCCACAATACACCGTCGCCTTCCAACAAGTCAACGCCAGTACCAGCAGATGCACAGTGTAATCCACATGCAACTGTGCCTAATCAGCAttacaatattaacaacaacaatgcaGTGGGCGGCAGTAATGCGTTACCACTGATGGATGTTGGAGACTATAACGGCTTTGGCCTACAGACGCAGCCATATGATAGAGACTACTATGGCTTTGGCCAACAGGCTCAGCCTTACCATAACAATAATTTTGGAGGCGCTGGCGCCTCCCACTGGGACATGAAATATAATCCAGCCACTGGTGGtagaattaataatttaaacaatcTCAATACTCCAAGCAATTTCACTGGGAACAACATTTCAACAGCCGCCAATATAACTGGGGGCCCAGGTAGTAGTGCAAATGGCACCAGTTGGAATCTAACTGCCGGTCACTTTCATCCGCATCATCTTCAAATCCAgcagcaaacaaaaaataatggcACAGCAAATAATATTAATGGTATTACCAATACAGCAGTCACAAACGCTAATAGTGGCAGCAACATTCTAACGTTTGACAACATCAATTCACAGgaccaaaaaatattgcaactgAGTCCCGAAGATCTTCAGATTTCAAATCTCTCAATATCACTTTAA
Protein Sequence
MDPIQQQQQQQRQQQNINYNGMQTQQQRQQQPTNNSKNVRKKAYVKIIEQPAGKALRFRYECEGRSAGSIPGVNSTPETKTYPTIEIVGFKGRAVVVVSCVTKDQPYRPHPHNLVGKEGCKKGVCTLEINSETMRAVFSNLGIQCVKKKDIEAALKAREEIRVDPFKTGFTHRFQPSSIDLNSVRLCFQVFMESDQKGSFTQPLAPVVSEPIYDKKAMCDLVICRLCSCSATVLGNTQIILLCEKVAKDDISVRFYEENNGQTIWEAFGEFQHTDVHKQTAIAFKTPRYRKIDITEPAKVFVQLKRPSDGITSEALQFEYLPLDSDPAHLKRKRKKANGDPLHLVLQQQNNQHGNDRQGGGQTNINCWNGTNTPAEIKTEPRDVSPQACGMYPIPPNLTPSPQPLSPSNAYTHNTPSPSNKSTPVPADAQCNPHATVPNQHYNINNNNAVGGSNALPLMDVGDYNGFGLQTQPYDRDYYGFGQQAQPYHNNNFGGAGASHWDMKYNPATGGRINNLNNLNTPSNFTGNNISTAANITGGPGSSANGTSWNLTAGHFHPHHLQIQQQTKNNGTANNINGITNTAVTNANSGSNILTFDNINSQDQKILQLSPEDLQISNLSISL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-