Basic Information

Insect: Limenitis camilla
Gene Symbol: -
Assembly: GCA_905147385.1
Location: LR990253.1:6133660-6141869[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.0015 0.13 13.4 1.9 1 23 227 249 227 249 0.98

2 19 1.5 1.3e+02 4.0 0.1 2 23 273 295 272 295 0.95

3 19 0.0009 0.08 14.1 0.1 1 23 348 370 348 370 0.97

4 19 0.083 7.4 7.9 2.5 1 23 375 398 375 398 0.95

5 19 0.25 22 6.4 0.5 1 12 405 416 405 428 0.84

6 19 0.19 17 6.8 2.8 1 23 435 458 435 458 0.89

7 19 0.0064 0.57 11.4 2.5 1 23 464 486 464 486 0.98

8 19 2.7e-06 0.00024 22.1 1.3 1 23 492 514 492 514 0.99

9 19 6.6e-06 0.00059 20.8 2.3 1 23 520 543 520 543 0.98

10 19 0.0021 0.19 12.9 1.4 1 23 718 741 718 741 0.91

11 19 0.072 6.4 8.1 0.4 2 23 768 790 767 790 0.91

12 19 0.3 26 6.2 0.6 2 23 813 834 812 834 0.97

13 19 0.018 1.6 10.0 1.5 1 21 838 858 838 860 0.95

14 19 0.054 4.8 8.5 0.5 1 23 865 888 865 888 0.86

15 19 0.04 3.5 8.9 2.0 1 23 895 918 895 918 0.94

16 19 0.00069 0.062 14.5 0.4 1 23 925 948 925 948 0.98

17 19 1.2e-05 0.0011 20.0 0.8 1 23 954 976 954 976 0.97

18 19 2.7e-05 0.0024 18.9 0.8 1 23 982 1004 982 1004 0.99

19 19 3e-05 0.0027 18.8 3.7 1 23 1010 1033 1010 1033 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.0015	0.13	13.4	1.9	1	23	227	249	227	249	0.98
2	19	1.5	1.3e+02	4.0	0.1	2	23	273	295	272	295	0.95
3	19	0.0009	0.08	14.1	0.1	1	23	348	370	348	370	0.97
4	19	0.083	7.4	7.9	2.5	1	23	375	398	375	398	0.95
5	19	0.25	22	6.4	0.5	1	12	405	416	405	428	0.84
6	19	0.19	17	6.8	2.8	1	23	435	458	435	458	0.89
7	19	0.0064	0.57	11.4	2.5	1	23	464	486	464	486	0.98
8	19	2.7e-06	0.00024	22.1	1.3	1	23	492	514	492	514	0.99
9	19	6.6e-06	0.00059	20.8	2.3	1	23	520	543	520	543	0.98
10	19	0.0021	0.19	12.9	1.4	1	23	718	741	718	741	0.91
11	19	0.072	6.4	8.1	0.4	2	23	768	790	767	790	0.91
12	19	0.3	26	6.2	0.6	2	23	813	834	812	834	0.97
13	19	0.018	1.6	10.0	1.5	1	21	838	858	838	860	0.95
14	19	0.054	4.8	8.5	0.5	1	23	865	888	865	888	0.86
15	19	0.04	3.5	8.9	2.0	1	23	895	918	895	918	0.94
16	19	0.00069	0.062	14.5	0.4	1	23	925	948	925	948	0.98
17	19	1.2e-05	0.0011	20.0	0.8	1	23	954	976	954	976	0.97
18	19	2.7e-05	0.0024	18.9	0.8	1	23	982	1004	982	1004	0.99
19	19	3e-05	0.0027	18.8	3.7	1	23	1010	1033	1010	1033	0.98

Sequence Information

Coding Sequence: ATGGAAGTAGAGCAAAGTAAAAAGCGCGATTGTCTACATAAATGCAAGTGTTGTTTAGAAGAGACGGGATTAAAAGATTTGTGGTCTCCCAATGATGATGGAGAATGTGAGAAATACGGCGATATGTTGACGGAATGTTTTGCACTTTCATGGGAAGAACCTTCAGACATCAATTCAGAATATATTTGTAGAAACTGTATCAGTAGATTAAAAGCTGCAGTTAAGTTTAAAAAGGAAATCTTATACTCCGAGCAGATGTTACTGTTAAAAATTGAACAGGAAACCTTTGAAAATACTAAGCAGGATACTGAATTGGAAGATGAGGTGACGACAGAATATTTAGAATTAGAGGAAGATAACTTTACTCAGGAAACAACAACTATTAAAATAGAACCAATAGAAAATCCTGAAGTAGTGAAAAAAAAGTACAAAAACTACACGGACGAGGATTTACAGAAATGTGTAGATGCAGTTCTTAAAAACAAAATGTCACAAAATAAAGCGTCAATCACGTTTAATGTGTCTCGGAGCGCTATCAGTCGAGCACTGGCAAAATTAGAGCGAGCGAAAAAACCCAAAAAGAAAGTTGCACCAGAATTACAAAAATCACAAGAAAATTTGGATTATATATTAAAATATTCAAATGCGACGCCATTTAAAGGATTTTTTGGAAATGGATACACTTGCTTTTTGTGCCCAAAAAAATTTGAGGAGCCGTTTAAATTGAAAAGTCATACATTAAAACATTTGAGGAATAAAAAATTAAGTGTGGTGATACCTATTGGTCAATGTGTTAAATTAGATTTGAGTGATTTAGAGTGTAATGTTTGTGTGTTGAAGATTGATTCACTCGAGAGTTTATTGGAACATTTGAAAGTTAAACACGGGGAATCAATTCATACTTTTGATGGTGAGAAAAGTGAGAACTATTTGGTGCCGTTCAAGTTTGAAAGTGATGTGTTGAGTTGTGTTGTGTGTTGCGAGGACTTTTTGACATTCAAATTGTTGTATGATCATATGAATTGTAAGCATTATAGTAATTATGAGTGTGTGGAGTGTGGAAGGGGTTTTATTAGTCAGATTTCTTGGAGAACGCATGCGTTGAGACACAAAACTGGTGTTTTTGAGTGTACGTTTTGTGTGAAAGTTTTTACTAGCCGCGACCGTTGTAATGCTCACGAGCGCAGCGTCCATTTATTGAAACATAAACGTTATAAATGTGGTTATTGTGACGAGAAGTTTGTGGATATTGTTAAAAAACATGAGCATGAGGTGGAAGTTCACAATGCGGTAAAAAAGTTGTTTGAATGTGGCACATGTCATAGAAAGTACAAAAGTGTGAAAAATTTGAGGTTTCATATTGAAGATTATCACTTATTGAATCGCCCGCACAAGTGTAGTGTATGTGAGTTTAGTGCAAAGAAGTCTACGGAGTTGAAGAATCATATATTGAAGCATACGAGGGTGAAGGGTTACAAGTGTGATGTGTGTTCGAAGTCGTATGTGAGGAAGACGACCCTCCGCGAACACTTGCGGATACACGCGAATGATCGTCGGTTCAAGTGTGAGGAGTGCGGGCAGCGCTTCGTGCAGAAGTGTAGCTGGCGGGCGCATATGCGCGTGAAGCATGCGGCCATCAAAAAACCAATCAAATCCCAAGGAGAGAAGAAGCCGAAAACATACACAGAAGAAGATTTACAGAAGTGTCTAGAAGATGTTAAAAATGGAAGGTTTACGCAGGGCAAAGCGGCTTTGTTTTATGATATACCAAGAACTACCATCACTCGAGCTTTAAAGAGATTCGAATTGAGATTAGCAAAACCAGAGACATTAAAAAAGATAAAACAATACACAGATGAGGATTTAAAGAATTGTCTTGAAGCGATCGAAAACAACACGTTTTCTCAAACAAAAGCGTCAGAGTCGTACAAAATACCAATAAAAACTATCAGGAGGGAATTAGCGAGGAGATCCACCAAAGCCTCTACTGAAACCAGTGAAAAAACAAAAGTTTTCAATAAAAAGAAACGAAAGGAAAGACCTATATCAGACTCATACTTGTTCCCCGAGCTGAGAAACTTTGACAGTGACGTTTGCGTTCTCTTTGACTGTTCCAACGCAACCCCTATCAGGTGTAGAGGTGGTGTGGGTTACAAATGCTGTTTCTGTCCACAACAATTCCCAGATCCCGCAGATCTCAAAAAACATTCGGCAAACCAACACGAAAACAAAACGATAAGTACCCTCCTAAGAGGAAGACATGGATCTGCCTTCTTACTAAAATTGGATATCTCGTATCTCCATTGCAAAATTTGCGACAAAAAAATGGAGACGCTGGAAAGTTTGGTCAATCACTTAATTGGCGATCATAATCGGAATATACATAAAGATATCAAAAACTTTATTTTGCCGTTTAAGTTTGAAGGAGATGAGATTCGTTGTGTTATTTGCAATAGTTTGTTTAACAAATTCAAAGTGTTGCAAGAGCACATGAGCACGCATTTTCGGAATTACATCTGCGACTATTGTAATGCTGGATTTGTCACGCGCTCGATTTTGTTGAAGCACATGAAATGCCATTTAATAGGTCTATTTAAATGTGGAGTATGTGACAAAACTTATGATACGGTAAGGAAGAAGAGAGCTCATGAGATCCAGGTCCATATCCAGGGTAGGATGTTGTACAAATGTGGGTACTGTAGTGAGAAGTTTAATAGATATCAGAAGCGGGAGCAGCATCTTGTTAAAGTGCATGGGGTGCAGTCTATTACGTTTAAGTGTCAGGCTTGTGATAAGGTGCTGGTGTCTCAGCAGGCGCTGCGAGACCACACGAGGAGGGATCACCTGATGGAGCGTCAACACACTTGTCCGGAGTGCGGGTTGAACTTCTTCAGGCCGAGTGACGTGAGACGGCACATGGTGAGGCATAATGGTGTGAGGAAGTTTCAATGTGACGTTTGTTTGAAGTCGTATTCTAGACTGAATACTCTGCGCGAACACTTGAGGATACACGCGGACGATAGACGGTTTAAGTGTGAGCATTGTGGTGTTGGGTTTGTGCAGAAGTGTAGTTGGCGCGCACACATGCGCACCAAGCATGGTGAACAAGTGTAG
Protein Sequence: MEVEQSKKRDCLHKCKCCLEETGLKDLWSPNDDGECEKYGDMLTECFALSWEEPSDINSEYICRNCISRLKAAVKFKKEILYSEQMLLLKIEQETFENTKQDTELEDEVTTEYLELEEDNFTQETTTIKIEPIENPEVVKKKYKNYTDEDLQKCVDAVLKNKMSQNKASITFNVSRSAISRALAKLERAKKPKKKVAPELQKSQENLDYILKYSNATPFKGFFGNGYTCFLCPKKFEEPFKLKSHTLKHLRNKKLSVVIPIGQCVKLDLSDLECNVCVLKIDSLESLLEHLKVKHGESIHTFDGEKSENYLVPFKFESDVLSCVVCCEDFLTFKLLYDHMNCKHYSNYECVECGRGFISQISWRTHALRHKTGVFECTFCVKVFTSRDRCNAHERSVHLLKHKRYKCGYCDEKFVDIVKKHEHEVEVHNAVKKLFECGTCHRKYKSVKNLRFHIEDYHLLNRPHKCSVCEFSAKKSTELKNHILKHTRVKGYKCDVCSKSYVRKTTLREHLRIHANDRRFKCEECGQRFVQKCSWRAHMRVKHAAIKKPIKSQGEKKPKTYTEEDLQKCLEDVKNGRFTQGKAALFYDIPRTTITRALKRFELRLAKPETLKKIKQYTDEDLKNCLEAIENNTFSQTKASESYKIPIKTIRRELARRSTKASTETSEKTKVFNKKKRKERPISDSYLFPELRNFDSDVCVLFDCSNATPIRCRGGVGYKCCFCPQQFPDPADLKKHSANQHENKTISTLLRGRHGSAFLLKLDISYLHCKICDKKMETLESLVNHLIGDHNRNIHKDIKNFILPFKFEGDEIRCVICNSLFNKFKVLQEHMSTHFRNYICDYCNAGFVTRSILLKHMKCHLIGLFKCGVCDKTYDTVRKKRAHEIQVHIQGRMLYKCGYCSEKFNRYQKREQHLVKVHGVQSITFKCQACDKVLVSQQALRDHTRRDHLMERQHTCPECGLNFFRPSDVRRHMVRHNGVRKFQCDVCLKSYSRLNTLREHLRIHADDRRFKCEHCGVGFVQKCSWRAHMRTKHGEQV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00896695;
90% Identity: iTF_00896695;
80% Identity: iTF_00896695;