Basic Information

Insect: Ligdia adustata
Gene Symbol: -
Assembly: GCA_947049285.1
Location: CAMRIN010000105.1:1708575-1721406[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.9 1.3e+02 3.7 1.2 1 23 239 262 239 262 0.94

2 17 0.0051 0.36 11.8 0.1 2 23 288 310 287 310 0.97

3 17 0.12 8.7 7.4 0.9 1 23 372 394 372 394 0.95

4 17 0.012 0.84 10.6 0.3 2 23 465 487 464 487 0.94

5 17 0.00013 0.0093 16.8 2.1 2 23 493 515 492 515 0.95

6 17 0.014 1 10.4 0.7 1 23 520 543 520 543 0.94

7 17 0.68 48 5.1 0.5 2 23 546 568 545 568 0.92

8 17 0.0066 0.47 11.4 0.3 2 22 575 595 574 595 0.93

9 17 0.0067 0.47 11.4 0.6 1 23 653 676 653 676 0.90

10 17 2.9 2.1e+02 3.1 0.1 2 23 704 726 703 726 0.89

11 17 0.37 26 5.9 0.1 3 23 750 772 749 772 0.94

12 17 0.00056 0.04 14.8 0.4 3 20 779 796 777 800 0.90

13 17 0.02 1.4 9.9 0.6 1 23 805 828 805 828 0.97

14 17 0.00047 0.034 15.0 0.2 2 23 834 856 834 856 0.92

15 17 0.00024 0.017 16.0 4.9 1 23 860 883 860 883 0.97

16 17 0.00035 0.025 15.4 0.5 2 23 890 911 889 911 0.96

17 17 0.0077 0.55 11.2 3.1 1 23 917 939 917 939 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.9	1.3e+02	3.7	1.2	1	23	239	262	239	262	0.94
2	17	0.0051	0.36	11.8	0.1	2	23	288	310	287	310	0.97
3	17	0.12	8.7	7.4	0.9	1	23	372	394	372	394	0.95
4	17	0.012	0.84	10.6	0.3	2	23	465	487	464	487	0.94
5	17	0.00013	0.0093	16.8	2.1	2	23	493	515	492	515	0.95
6	17	0.014	1	10.4	0.7	1	23	520	543	520	543	0.94
7	17	0.68	48	5.1	0.5	2	23	546	568	545	568	0.92
8	17	0.0066	0.47	11.4	0.3	2	22	575	595	574	595	0.93
9	17	0.0067	0.47	11.4	0.6	1	23	653	676	653	676	0.90
10	17	2.9	2.1e+02	3.1	0.1	2	23	704	726	703	726	0.89
11	17	0.37	26	5.9	0.1	3	23	750	772	749	772	0.94
12	17	0.00056	0.04	14.8	0.4	3	20	779	796	777	800	0.90
13	17	0.02	1.4	9.9	0.6	1	23	805	828	805	828	0.97
14	17	0.00047	0.034	15.0	0.2	2	23	834	856	834	856	0.92
15	17	0.00024	0.017	16.0	4.9	1	23	860	883	860	883	0.97
16	17	0.00035	0.025	15.4	0.5	2	23	890	911	889	911	0.96
17	17	0.0077	0.55	11.2	3.1	1	23	917	939	917	939	0.97

Sequence Information

Coding Sequence: ATGAATTTCGACGAGATAGTAGTGAAAGAAAGCCCCGGGATATGCCGGTGTTGCTTGTCCGAGGGGTGTTACAAAGACTTGGGCGCTGAGTATACATGGATGAACGAAACTGAGGTTTATGCGGACATGCTACTGGATTGCTTCGATATCGGCATCACTCAGCACAATGATGGCCCTAATGGTGCTAAGCGACTCATCTGCGAGGTTTGCATCACACGGTTGCGAGATGCATGCAACTTTAAGAAGCAAGTGGTGGACTGTGAGAAGAGGTTTATTGACATGCTCGCACGTGGAGAGTTCAGGCCTAAAGTGCTTCTTTACCAGCCCCAAAGTAGTATGAAAGAGGAGTCATTGGATGAAACAGCGGAAGATGTACTGGCAGCAGATATTGAGTATCTCGAAGACATGGATTATGTACCTGATGACGAGGAAATAAAAACGGAAGCTCATCAATCAACATCAGCAGCCACCACGTCCAGTGAACCAGCTCCTCCCCGAGCCAAGCGAGGTCGGCCTAAGAAAGAGGAAGATCGACCGGACAAGGTCAAGAAGCAGAAAGTGACCAAAGGTGACAAACCAGAAGGAATGGCTTCGAAAAAGGCAGTGAGTAAGTCCTCTTTATCAGCCACAAAACGGAATCGCCTTATGAAAGAAAACGCTATAATTCTTCTAGAAAACTCCACCATACTACCTTTCAAATGGCACAGAAAGAACTATCTCTGTTTCTATTGCCATCTCCCTCTAATAACCATGGAGGAAGTGAGACATCATACTGCCACAGCACACAAAATGCCGAACGTAAAATCAGCTGTGCTTTTTTTACGAAGAGACGACAAAGTCAAAGTTGATGTGACGTCTATTAAATGTAAGCTTTGTAACATTATGATTACGGACCTTAACGCTTTGGTCGTACATATGAAGACTGATCATAGCAAAGCCTTCAGCGATGGTGAAACCGGAGTGATACCGTATAGATTATTAGATAACGATAACTATGAATATGTAAAAACGCGGAAATACAAGGGGACCGAGTCCGTATCGACGCGTAGAAGACGAAACCTACAGATTCTGTTCAACAACACAACCGTAATTCCATTTAAATGGCGTGGAAAATATCTTTGCTTCTATTGCAGCAAAGACGTGACAGCGTACGATGAGTTACTCAAACATACAAAACAACACGGTCAATGTTCTATTCTAGATCATTCACTGAAAGCTCTAAAAGGTGGCACTAATATGGAAATCAAAATCGACGTTTCAAATCTGGCTTGCACTTGCGGAGAAGTGGCTTTAAATCTACACGAGATAATAAAACATCTTGAAGCAAAACACGGCTTAGAATACGACAATAACGTTGACATGGCGATTGAGGAATACAGACTCGTCGATTTGAAATGTCTTGTGTGCGACGAAAACTTCACCTACTTCGGTTATTTAGTCTCGCACGTGAACAATAATCATCCGAAGAAGTGCCTTGTCTGTGAAAAATGCGATCAAAAGTTTAACAAGAAACGTGATCTGTTTTCTCATATGAAGAATTATCACAGAGAAGGGGGGTACTCTTGTGAGTTGTGTCCGCAGAGTTTCAACTCGCTCAATATACTCAGAAAGCATCGGATCAATAGGCATATGACTCGATGTCATATCTGCCAATTGAGATTACCCTCAGCGGTTCTGAGGCAGAAACATATAGATTTAGAACATCCTGACGATGGCTCTCTTCAATGCGACGCTTGCAGTAAAGAATTCCGAACGAAACAGGGTCTCAGAATGCACGCGAGGAAATGCAAAGGAGATCTGTTTCAATTATCATCCAAAAAGGAAGATTGTACCATGGACTTAGATTTGAACTACCAAGACCCAACAAAAAGACCCAGCGTCAAACAAATACGCGAAAACATCGTCACAGTCATCAACATGTCTACAGCGATTCCTTTTAACTTTTACAAGAACAAATTCAACTGTTTCTATTGCTCGAAAGACTTTCCCGATTCGGATTCAATGAAGGAGCACACCGTTTTAGAACACCCGGTGTGCGATGCCAAAGAGAAATGTATAAAAAAGTGTCGCGAATCGGTTGCGTGCGTAAAAATCGACGTTTCGAGTCTATCCTGTAAAATATGCTTCGAAAACATGCCAAATTTGGACAGTCTTCTCGATCATTTGATAGCAAAACACGATGCCAACTATGACAAATCGATCACGACTTGCTTACAACCCTACAAACTGATCAAAGACAACATGGCCTGTCCAAACTGTCCCGGGGAAGTGTTCCGTTTCTTCGGCACATTACTAAAGCACGTGAACAAAAATCATACTAATAATAACATCATATGCGTGTACTGCGGCGAAACATTCCGACGCGATCAGAACCTCCGCGTTCACATATGGCGTCATCATAGGGACGGTCGTTTCAAGTGCAACATTTGCGGCGCTGACTGCAACATACCCTCCCGCCTGTACATGCACATGGCGAAATCACACGGCGTGAAAGCGGCCAAGTGTCCCAAATGCCCCGAGGCGTTCTCCACCCAGTACTTACGCCAAAAGCATTTGATAGACGCTCACGATTCCGGTCACAAGTGCTCGTTTTGCGGCAAACTGTTTACTAGGAACTCCTTCATGCGTGATCATATTAGAAGGACTCATTTGAAAGAGAAAAACGTGGAGTGCTCCGTTTGTAACGTgaagtttttcaacaatgttctgttgagaaggcacatggtgaaacatagtggggagaagaatttccattgtgacgtgtgtGGAGAAAGATTCTTTTGGCGGAAGAGTTTGCGTACGCACATGTCAAGACATACTAAGCATTTGGATCCAATACATTTGTAA
Protein Sequence: MNFDEIVVKESPGICRCCLSEGCYKDLGAEYTWMNETEVYADMLLDCFDIGITQHNDGPNGAKRLICEVCITRLRDACNFKKQVVDCEKRFIDMLARGEFRPKVLLYQPQSSMKEESLDETAEDVLAADIEYLEDMDYVPDDEEIKTEAHQSTSAATTSSEPAPPRAKRGRPKKEEDRPDKVKKQKVTKGDKPEGMASKKAVSKSSLSATKRNRLMKENAIILLENSTILPFKWHRKNYLCFYCHLPLITMEEVRHHTATAHKMPNVKSAVLFLRRDDKVKVDVTSIKCKLCNIMITDLNALVVHMKTDHSKAFSDGETGVIPYRLLDNDNYEYVKTRKYKGTESVSTRRRRNLQILFNNTTVIPFKWRGKYLCFYCSKDVTAYDELLKHTKQHGQCSILDHSLKALKGGTNMEIKIDVSNLACTCGEVALNLHEIIKHLEAKHGLEYDNNVDMAIEEYRLVDLKCLVCDENFTYFGYLVSHVNNNHPKKCLVCEKCDQKFNKKRDLFSHMKNYHREGGYSCELCPQSFNSLNILRKHRINRHMTRCHICQLRLPSAVLRQKHIDLEHPDDGSLQCDACSKEFRTKQGLRMHARKCKGDLFQLSSKKEDCTMDLDLNYQDPTKRPSVKQIRENIVTVINMSTAIPFNFYKNKFNCFYCSKDFPDSDSMKEHTVLEHPVCDAKEKCIKKCRESVACVKIDVSSLSCKICFENMPNLDSLLDHLIAKHDANYDKSITTCLQPYKLIKDNMACPNCPGEVFRFFGTLLKHVNKNHTNNNIICVYCGETFRRDQNLRVHIWRHHRDGRFKCNICGADCNIPSRLYMHMAKSHGVKAAKCPKCPEAFSTQYLRQKHLIDAHDSGHKCSFCGKLFTRNSFMRDHIRRTHLKEKNVECSVCNVKFFNNVLLRRHMVKHSGEKNFHCDVCGERFFWRKSLRTHMSRHTKHLDPIHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00666738;
90% Identity: -
80% Identity: -