Ladu006780.1
Basic Information
- Insect
- Ligdia adustata
- Gene Symbol
- dsx
- Assembly
- GCA_947049285.1
- Location
- CAMRIN010000171.1:632668-633267[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-24 3.2e-20 72.1 12.1 2 47 32 77 31 77 0.97 2 2 2.6 1.5e+04 -3.7 0.1 27 30 183 186 181 191 0.61
Sequence Information
- Coding Sequence
- ATGGTGTCCGTGGGCGCGTGGAGGCGCCGGACGCCCGACGACTGCGAGGAGCGGTCCGAACCCGGAGCGTCCAGCTCGGGGGTGCCTCGCGCGCCGCCGAACTGCGCTCGCTGCCGCAACCACCGGCTCAAGGTCGAGCTGAAGGGCCACAAGCGATACTGCAAGTACCGGTATTGCAATTGCGAGAAGTGTCGCCTGACAGCGGATAGACAGCGCGTGATGGCGCTCCAGACGGCTTTGAGACGAGCACAGGCACAAGACGAAGCACGGGCGCGGGCACTGGAGTCCGGGCTGCAACCTCCTGGGTTAGAGTTAGAGCGACCAGACCCGCCGATAGTTAAAGCACCTAGAAGTCCTGTGGTGCCGCCGCCCCCGCCTCGTTCTATCGGCTCCCCCAGCCTGGACTCTGTCCCGGAGTCACCGGGGGTCTCACCGTACGCACAAGGGCCTCCGTCGGCGCCGCCGCAGCCTCCTATGCCGCCCCTGCTGCCGCCGCAGCAACCAGGTCAGTCCTATTCACAACAAACACTTCATCAAGTTGTTTACAAACACTGTCACAATGTTCACGGAAATCTCATCCGGTTATGTGAAAAGTTCTAG
- Protein Sequence
- MVSVGAWRRRTPDDCEERSEPGASSSGVPRAPPNCARCRNHRLKVELKGHKRYCKYRYCNCEKCRLTADRQRVMALQTALRRAQAQDEARARALESGLQPPGLELERPDPPIVKAPRSPVVPPPPPRSIGSPSLDSVPESPGVSPYAQGPPSAPPQPPMPPLLPPQQPGQSYSQQTLHQVVYKHCHNVHGNLIRLCEKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01317340;
- 90% Identity
- iTF_01209319;
- 80% Identity
- -