Ladu013150.1
Basic Information
- Insect
- Ligdia adustata
- Gene Symbol
- clz9
- Assembly
- GCA_947049285.1
- Location
- CAMRIN010000368.1:124791-127001[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-08 4.1e-06 26.8 0.0 1 40 16 56 16 60 0.91
Sequence Information
- Coding Sequence
- ATGCCGCGAAAATACGAGAAAAAGAATACTAGATGTTCTGATATAGATGAAGATGCGATGACAGATGCTATAAAAGAGGTCGTAAACAAAACGTTGTCTATCAGAAAATCCGCTGAAAAATATAATATCAAACCATCAACTCTTATGAGTCGCTTGGTGAAGTCTCGAGAAGATGAAAAAGAAGACCACATTCCTGCACGAGCATTCTGCAACAAGTTTGCCACCAAACAAGTATTTTCAAAGGATGAAGAGGCTCTTTTAGCCAAGTATATTAGTGACTGCTCAAAAATGCACTATGGACTAACACTTGTACAGGTAAGAAGACTTGCGTATGAATTTGCCAAAGCTAACAACCTGAAGTACCCACCGTCTTGGGATATTAACAAAATGGCAGGGATAGATTGGGTGCATGGTTTTCGCCAAAGAAATACAGACCTGAGCCTAAGAAAACCTGAAAACACCAGTGCTGCGAGATCATTCGGGTTCAACAAGACAGCCGTCGATCGCTTCTTTGCCAATCTTGAATCGGTTTATGTCAAACATAAACTAACTGCTGATAGGATTTATAATTTTGATGAATCGGGGATATCAACAGTGCTGGATACGCCAAAAGTCTTGGCCGATAAAAAGCAAAAGCAGATTGGACAACTTGTTTCGGCCGAAAGAGGCGAACTTGTTACGTTTGGGGGAATCATTTCAGCAAGTGGTAACACAATTCCACCTCTATTTATATTCCCGAGAGTCCATTTTAAGGATCGCTGGATGGAATGTGCTATAGAAGGCAGTCTAGGACTAGCTACAAAAAGTGGGTGGATAAATTCCTATATATTTCTGGACGTACTGAAACACATCCAAAAGAAAACCTGCTGCTCTAAGGATAATCCTATTCTGCTTCTGGTTGATAACCACGAGAGCCACGTCACTTTAGCAGCAGTGGACTATGCTCGTGATAATGGTATTATTTACATGTCTTTCCCGCCGCATACCACGCACCGTCTCCAGCCACTGGACGTTGGCGTATTTGGTCCATTCAAAGCTAAATTAAAAGTGGCGTTCAATGATTGGCATGTGAATAACCCTGGGAAAACGCTGAATATTTACAATATTCCAAAACTTGCGAAACATGCCTATTTTGAATCATTCACTGGCAAGAACATCACAAGTGCCTTTGAAAAAACCGGTATTTATCCTTTCAACAAATTGGTGTTCAGTGACGATGATTTCACTCCCGTCCAAGTTTATAGCTCGGCCGGTCCAGATGTCCCTGAACAACCAATTGTACTTGAAGGAGTGGCTCATCAGGAACAAGGTTTAGGACCAAGATCGTCACCTTCTTTGCTGAACATGATCCCCGAAGAAATGGTTGCCCCTGAACAAGATCCCAGATCAGACCCTGGGCGTTCAACATCATGTTTGACGCCAAGGCCAGTTCAATCACCACCTAACCATCCCATATCAGAGCCTGGGTCTTCAAGGTCATGTGTGACATCAAAGCAGGTTGAATTAACATCTTCGTCAGTTGTCAATGTTGTTACCCCAGAAGCAGTCCGTCCATATCCAAAAGTAAACAAAAATCATCAAAATAAGACAAAGAAAGGAAAAGAGCCCGGAAAATCAAGAATATATACAGATACCCCAGAAAAAAATAGATTGGAAGACTTAGAAAGGATCAAGACAATGAAAAAGGAAGAGCAAGAACGAAAACAAAAGGCTAAAGAGATGAAACGCGCTATTACTTTGTTGTCAGACAATAAAAAAAATACAGGAAATACTAAAAGTAAACCAAAGAAACAGAAAATGACCGAAGAGACAGAAAGCGAAGACGAGACTGATATGAGTTTAAGAGAAAGTTCTTGTTCTCCCATGGATGAGATATCTGAAGAATCTGACATGGACACGGAGCCTCCTGTTACGACAAATGAGATAAACGAGAAGACATTCGTGCTCGTAAAGTTTGAGAAAAAGAAATCTGTTTTATATTATGTCGGGCAAGTCCTAACTAAATACAGCCCCACTGAGTACAAAGTTTCATTTTTAAGAAAGAAACTTGGTACTAGGTGGAAGTTTGTTTTTCCGATGACGAAAGATGAAGGGACAGTATATATATCAGACATTGTCTGTATACTGTCGCAGTCCAAGTCAGCTGTTACGGCAAGAACAGCTGATATATATTCTTTTAAGAAAAATTTCTCTTTGTACAACATTCAATAG
- Protein Sequence
- MPRKYEKKNTRCSDIDEDAMTDAIKEVVNKTLSIRKSAEKYNIKPSTLMSRLVKSREDEKEDHIPARAFCNKFATKQVFSKDEEALLAKYISDCSKMHYGLTLVQVRRLAYEFAKANNLKYPPSWDINKMAGIDWVHGFRQRNTDLSLRKPENTSAARSFGFNKTAVDRFFANLESVYVKHKLTADRIYNFDESGISTVLDTPKVLADKKQKQIGQLVSAERGELVTFGGIISASGNTIPPLFIFPRVHFKDRWMECAIEGSLGLATKSGWINSYIFLDVLKHIQKKTCCSKDNPILLLVDNHESHVTLAAVDYARDNGIIYMSFPPHTTHRLQPLDVGVFGPFKAKLKVAFNDWHVNNPGKTLNIYNIPKLAKHAYFESFTGKNITSAFEKTGIYPFNKLVFSDDDFTPVQVYSSAGPDVPEQPIVLEGVAHQEQGLGPRSSPSLLNMIPEEMVAPEQDPRSDPGRSTSCLTPRPVQSPPNHPISEPGSSRSCVTSKQVELTSSSVVNVVTPEAVRPYPKVNKNHQNKTKKGKEPGKSRIYTDTPEKNRLEDLERIKTMKKEEQERKQKAKEMKRAITLLSDNKKNTGNTKSKPKKQKMTEETESEDETDMSLRESSCSPMDEISEESDMDTEPPVTTNEINEKTFVLVKFEKKKSVLYYVGQVLTKYSPTEYKVSFLRKKLGTRWKFVFPMTKDEGTVYISDIVCILSQSKSAVTARTADIYSFKKNFSLYNIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00825618;
- 90% Identity
- iTF_00895869; iTF_00825618; iTF_00825619; iTF_00825620; iTF_00825621; iTF_00825622; iTF_00825623; iTF_00825624; iTF_00825625; iTF_00825626; iTF_00825627; iTF_00825628;
- 80% Identity
- iTF_00895869;