Basic Information

Insect: Hypomecis atomaria
Gene Symbol: clz9
Assembly: GCA_964007245.1
Location: OZ023284.1:5041602-5043881[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.5e-08 3.5e-06 27.8 0.0 1 38 16 54 16 60 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.5e-08	3.5e-06	27.8	0.0	1	38	16	54	16	60	0.90

Sequence Information

Coding Sequence: ATGCCGCGAAAATACGAGAAAAAGAATACTAGATGTTCTGATATAGATGAAGATGCGATGACAGAAGCTTTAAAGGAGGTCGTAAACAATACGTTGTCTATCAGAAAATCCGCtgataaatataatatcaaacCATCAACTCTTATGAGTCGCTTGGTGAAGTTTCGAGAAGATGAAAAAGAAGACCACATTCCTGCACGAGCATTCAGCAACAAGTTTGCCACCAAACAAGTATTTTCAAAGGATGAAGAGGCTCTTTTAGCCAAGTATATCAGTGACTGCTCAAAAATGCACTATGGACTAACACTTGTACAGGTAAGAAGACTTGCGTATGAATTTGCCAAAGCTAACAACCTGAAGTACCCACCGTCTTGGGATATTAACAAAATGGCAGGGATAGATTGGGTGCATGGTTTTCGCCAAAGAAATACAGACCTGAGCCTAAGAAAACCTGAAAACACCAGTGCTGCGAGATCATACGGGTTCAACAAGACAGCCGTCGATCGCTTCTTTGCCAATCTTGAATCGGTTTATGTCAAACATAAACTAACTGCTGATAggatttataattttgatgaatcGGGGATATCAACAGTGCTGGATACGCCAAAAGTCTTGGCCGATAAAAAGCAAAAGCAGATTGGACAACTTGTTTCGGCCGAAAGAGGCGAACTTGTTACGTTTGGGGGAATCATTTCAGCAAGTGGTAACACAATTCCACCTCTATTTATATTCCCGAGAGTCCATTTTAAGGATCGCTGGATGGAAGGTACTATAGAAGGCAGTCTAGGACTAGCTACAAAAAGTGGGTGGATAAATTCCTATATATTTCTGGACGTACTGAAACACATCCAAAAGAAAACCTGCTGCTCTAAGGATAATCCTATTCTGCTTCTGGTTGATAACCACGAGAGCCATGTCACTTTAGCAGCAGTGGACTATGCTCGTGATAATGGTATTATTTACATGTCATTCCCGCCGCATACCACGCACCGTCTCCAGCCACTGGACGTTGGCGTATTTGGTCCATTCAAAGCTAAATTAAAAGTGGCGTTCAATGATTGGCATGTGAATAACCCTGGGAAAACGctgaatatttacaatattccaAAACTTGCGAAACATGCCTATTTTGAATCATTCACTGGCAAGAACATCACAAGTGCCTTTGAAAAAACTGGTATTTATCCATTCAACAAATTGGTGTTCAGTGACGATGATTTCACTCCCGTCCAAGTTTATAGCTCAGCCGGTCCAGATGTCCCTGAACAACCAATTGTATTTGAAGGAGTGGCTCATCAGGAACAAGGTTTAGGACCAAGATCGTCACCTTCTTTGCTGAACATGATCCCCGAAGAAATGGTTGCCCCTGAACAAGATCCCAGATCAGACCCTGGGCGTTCAACATCATGTTTGACGCCAAGGCCAGTTCAATCACCACCTAACCATCCCATATCAGAGCCTGGGCCTTCAACATCATGGGTTACGCCAAGGTCAGTTGAATCACCACCTAACCATCCCATATCAGATCCTGGGTCTTCAAGGTCATGTGTGACATCAAAGCAGGTTGAATTAACATCTTCGTCAGCTGTCAATATTGTTACCCCAGAAGCAGTCCGTCCATATCCAAAAgtgaacaaaaataatcaaaaaaagaCAAAGAAAGGAAAAGAGCCCGGAAAATCAAGAATATATACAGATACCccagaaaaaaatagattgGAAGACTTAGAAAGgattaaaacaatgaaaaaagaagagcaagaaagaaaacaaaaggCTAAAGAGATGAAACGCGCTATTACTTTGTTGtcagacaataaaaaaaatacaggaaatACTAAAAGTAAACCAAAGAAACAGAAAATGACCGAAGAGACTGAAAGCGAAGACGAGACTGATATGAGTTTAAGAGAAAGTTCTTGTTCTCCCATGGATGAGATATCCGAAGGATCTGACATGGACACGGAGCCTCCTGTTACGACAAATGAGATAAACGAGAAGACATTTGTGCTCGTAAAGTTTGAGAAAAAGAAatctgttttatattatgtcgGGCAAGTCCTAACTAAATACAGCCCCACTGAGTACAAAGTTTCATTTTTAAGAAAGAAACTTGGTACTAGGTGGAAGTTTGTTTTTCCGATGACGAAAGATGAAGGGACAGTATACATATCAGACATTGTGTGTATACTGTCGCAGTCCAAGTCAGCTGTTACGGCAAGAACAGCTGATATATATTCTTTTAAGAAAAATTTCTCTTTGTACAACATTCAATAG
Protein Sequence: MPRKYEKKNTRCSDIDEDAMTEALKEVVNNTLSIRKSADKYNIKPSTLMSRLVKFREDEKEDHIPARAFSNKFATKQVFSKDEEALLAKYISDCSKMHYGLTLVQVRRLAYEFAKANNLKYPPSWDINKMAGIDWVHGFRQRNTDLSLRKPENTSAARSYGFNKTAVDRFFANLESVYVKHKLTADRIYNFDESGISTVLDTPKVLADKKQKQIGQLVSAERGELVTFGGIISASGNTIPPLFIFPRVHFKDRWMEGTIEGSLGLATKSGWINSYIFLDVLKHIQKKTCCSKDNPILLLVDNHESHVTLAAVDYARDNGIIYMSFPPHTTHRLQPLDVGVFGPFKAKLKVAFNDWHVNNPGKTLNIYNIPKLAKHAYFESFTGKNITSAFEKTGIYPFNKLVFSDDDFTPVQVYSSAGPDVPEQPIVFEGVAHQEQGLGPRSSPSLLNMIPEEMVAPEQDPRSDPGRSTSCLTPRPVQSPPNHPISEPGPSTSWVTPRSVESPPNHPISDPGSSRSCVTSKQVELTSSSAVNIVTPEAVRPYPKVNKNNQKKTKKGKEPGKSRIYTDTPEKNRLEDLERIKTMKKEEQERKQKAKEMKRAITLLSDNKKNTGNTKSKPKKQKMTEETESEDETDMSLRESSCSPMDEISEGSDMDTEPPVTTNEINEKTFVLVKFEKKKSVLYYVGQVLTKYSPTEYKVSFLRKKLGTRWKFVFPMTKDEGTVYISDIVCILSQSKSAVTARTADIYSFKKNFSLYNIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00825619; iTF_00825620; iTF_00825621; iTF_00825622; iTF_00825623; iTF_00825624; iTF_00825625; iTF_00825626; iTF_00825627; iTF_00825628; iTF_01509544; iTF_00895870; iTF_00895869;
90% Identity: iTF_00895870;
80% Identity: iTF_00825619; iTF_00825620; iTF_00825621; iTF_00825622; iTF_00825623; iTF_00825624; iTF_00825625; iTF_00825626; iTF_00825627;