Ladu010620.1
Basic Information
- Insect
- Ligdia adustata
- Gene Symbol
- Rel
- Assembly
- GCA_947049285.1
- Location
- CAMRIN010000279.1:578261-596537[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.6e-25 1e-21 78.0 0.9 1 169 62 237 62 237 0.82 2 3 1.2 4.9e+03 -2.3 0.1 97 135 465 503 402 507 0.63 3 3 3.3 1.3e+04 -3.7 0.2 129 129 736 736 701 771 0.48
Sequence Information
- Coding Sequence
- ATGTCCTCGTGTGTCAGTGATGATATGAGTTCTTGTTCGGACTCTCCGGCTTCTTACACCACTTTGGAATCTCCCCATAGTTCGCCGCTACAGCAGGTTCCTCAAATAACGACCACCTTCAATGGAGTTTCTAATGCTGATAGGAAGCTGTACAAGTTTGAAGGCAATGGAGGAAAACCATACTTACAAATTACAGAGCAGCCCCAAAATCACTTCAGATTTAGATATGACAAAGAAAAATCCGGTTCAACACATGGCTGTCTGCTCGGCAAATCTTATGCTGAGAAAAATGTTAAAGAAAAAACGTACCCTACAGTTCAGCTGGTCAACTTTGTAGGTAAGGCGGTGATCAAGTGTTCTATAAAGTATCAGAATGCCAAAAAGGAACTTGAGAAAGCATACAAAATCTTGGAAGATACATATGAACCAAAAACTTTCAATGTTCCTAAGTGCAAAAGCTATCAAGTTGGATTTCGTGGTATTGCAGTCGACACCATCAAGAAGTCCGAATTAACTACCTTGCTCTGTGGGAAACTATCTGAGCAGCTGTCTAAAAGAAAGTCTTTTGATGTTAAAAAGCTGCATGATGAATGTAACAGCCTGGCAAAGTCGATGAATCTGAACGTAGTTCGTTTAAAGTTCACCGCACACGACGTTGATACTCGGAAGGAAATTTGCGATCCCGTACTATCGGATCCTATCTTCAATAAAAAAAGCGCGTCAACAAATGCTTTAAAAATATGCCGATTAAGCTTGTACAGCGGCCGATCCAGAGGACAAGAAGATATTTTCCTCTTGGTTGATAAAATCGATAAAAAAGACATCGAAGTTCATTTCTACAGAGAGGACAAGAAAGGGAACCGGGTGTGGTCTGCTAAAGGTGAATTCATACCGAATGATGTGCATTACCAGTGCGCTATTGTATGCAAGACTCCTGCATACGAATACCCTCAGATCGAAGAGGATGTGAAGGTATTCATCGAGCTGGTGAGACCTTCAGATGGAAGCACGAGCCCTCCACAACCGTTCCTCTATAAGGCTGATCTCGCGTACAGACAGTGCAAGAGGCGGAAAATGGCCAAGCCATGTCCTGTACGGGTTTCCACAGACTTTATTGCTTTACAGACTCATGACGTAACTACAGACGCATGCATGCAAGTTGTTCAAAGCGAACCTCCACAACAGACTTATGAATCACCCACTGGAAGCGAATGGGATAATATAGTCACAATCGCTTTAGGCACTCTTTATGAAACTGCCGACCAGAGCTTACACCCAACAGAGGCAATACAGCAGCAGTATATTAACACACAGCAAGGAATAACTGAATCGCAAATTATACTAGAACAACAGACACCAATGAACTCACAAGTGGTAATGGAGCTGCAACAACCAATTCAATCCTATGGAACGGTTGAATCACAAGAAACGTTGAAAATGTATGAGGCAATAGCAATACAAGAATTTACAGTATCACAAGAGACGATGGAACTTCAAGAGACGATGGAATCACAAGCGAAAGTTGCATCACAACAGACATTGGACATTTACAGTCCAATGGTACCACAAGAAGCAATCGAATTAGAAGGTGCAATAGAATTACAAGGAGCTTTGGAATTACAAAGGGCAATGGAATTACAAGTGGCAATGGAATCACAAAGGGCAATGGAATCACAGAAGGCGATGGAACTAGAAGAGTCAATGGAACAACAAGAGACTATGGAATCAAAAGGGTCAGCAGTAAGCCCAATGTGGAGCCAACCCCACCAGATAAGTTTCCAGCCTCAAGCTAGTATGATCGCACCGCCGTCTTCGGCACAGTTACTCCCATCTGAGTACAACGCTACGCCTTTTGAGATGGAAGACGATCCAATATCTCAAAATTTCTTTGAGGAATACTCCAATTTGTTTGGGTTACTACCTGAGGACAGCGGTCAATCGGTGGCAAGGGCTAATAAACTGTCGTTGGTCGGCGATTCTGGACGTGTAAAGGTGCAAGTAGCGTCTTCTTCAACTCAGACTAACGATCCAAGCGACACAGATCCAGGGGCGACTTATGACCAAATTCAAGGGATAGTAGAGCCCCAGGGGCCAGCTGAGTGTTTCGTTGTTAATTGGCCTCTAAACCGGAAAGAACTAAGCGAAATTGTAAATAAGAACACAAGAAGAGGAAAAAAAGAAAGTGAAAGCGAAGAAAGAAGTGTAAGCACAAGCAAAAAAGTTACAAGCTTAAGAATAGAAGCAAAGGAAGTTGAAAACGCGGAAGGAAACGAAATTACAGAGGCTAATTTAAGCTCAAGTACAGAACTAAAGGAAGGTGAAAGCGCAGAGGGAAGCGAAGAAGGAGAAAACGAAGGTGCAAGCTTGAGCTGTAAAACGGGTGATTATAGGAAAGCAAGAGAAAAGACAAAGGAATACTTAAAACTTGATGAAAATAAAGATAAAAGCACAGTAGCAACCGAGACTATAATTGAAGGAGCAAGACAAGAAGCAGAGACTAGCAAAGGTGCAGTATTTAAAATAAAGAGCTTGAAAAAGAACACACGCGAATATGAGCAGGCAAATATAAAAATGAACTGTGAAGGAGAAATTGTGGAGAAAAAGGAAAATCAAAGCGCACAAGCTAATGTATGTAAAGTAAATAAGGAAATCGATGCAATCAGAAACAAGAGTACAGATGATGACTACCCCGCATTGTTTACACAGGAAGACGCCGCAGAAGTCAAGAAGTTGGTACGCGAGTTGTGCGAAATAATCCGCGATAAGAAAGGCAGTGCCACGAACGCAAGCGCGCTACAAGAAAAGCTCGAACGACTGTTCCACATACGGCTCTCTAACGGAGATACGTTTCTCCACATGACGTTGTTTAAAAACCAGCAAAGCTTCGAAGCGCTCGTAAAAACGGTCCACAAGGCGAATATGTCGGATTTGTTAAACTGCAGCAACAACCGGGAGGAGACCATCCTGCATCTGGCCCTAACGTATGGAGATCCTAATGTTGTGTCGCTACTGGTCGAGAAAGGTTGTGACCCGATGGCACGCACTATAGATGAAGAGACGTGCGTGCACTACGCAGTGCGGTACGGGTCTGAGGCCACACTGCGCGCGCTGCTGGACGCGAGCGCGAGACGTGGAGTGAGCCTCGAGCTCGACGCGCGCAACGCGGAGCAGTATACGGCGCTTCACTTATGCGCGTTGGAAGGTAACGGCGCATGCGCGGCGTTGTTGCGCGGGCGCGGCGCTGAATTGTGCGTGCGAGACGGCGCGGGCCGCACGCCGCTGCATCTATGCGCTTACGACTCTCGGCCGCACGTTGCGCGCGCGCTGATCACTCACGCCAGCGTGACTGATGTCGACGCGAAAGACAGGCGCGGACTTACTGCGTTACAGGTGGTATGCCTCCGCGCGCCGCCGGACGTAGAGATGGCGGAGGTGTTACTATCAGCCGGCGCGGATCCTCGCGCGGCGATCGCTGCGTCTCGCTCGCACCCGCGTCTTGACCACATCCTGCGTCGTCTGCTGTCTCCACACACATACACGCAGCTGATAGACGAGGCAGAACAGCTGAGCGACGACACCCTATAG
- Protein Sequence
- MSSCVSDDMSSCSDSPASYTTLESPHSSPLQQVPQITTTFNGVSNADRKLYKFEGNGGKPYLQITEQPQNHFRFRYDKEKSGSTHGCLLGKSYAEKNVKEKTYPTVQLVNFVGKAVIKCSIKYQNAKKELEKAYKILEDTYEPKTFNVPKCKSYQVGFRGIAVDTIKKSELTTLLCGKLSEQLSKRKSFDVKKLHDECNSLAKSMNLNVVRLKFTAHDVDTRKEICDPVLSDPIFNKKSASTNALKICRLSLYSGRSRGQEDIFLLVDKIDKKDIEVHFYREDKKGNRVWSAKGEFIPNDVHYQCAIVCKTPAYEYPQIEEDVKVFIELVRPSDGSTSPPQPFLYKADLAYRQCKRRKMAKPCPVRVSTDFIALQTHDVTTDACMQVVQSEPPQQTYESPTGSEWDNIVTIALGTLYETADQSLHPTEAIQQQYINTQQGITESQIILEQQTPMNSQVVMELQQPIQSYGTVESQETLKMYEAIAIQEFTVSQETMELQETMESQAKVASQQTLDIYSPMVPQEAIELEGAIELQGALELQRAMELQVAMESQRAMESQKAMELEESMEQQETMESKGSAVSPMWSQPHQISFQPQASMIAPPSSAQLLPSEYNATPFEMEDDPISQNFFEEYSNLFGLLPEDSGQSVARANKLSLVGDSGRVKVQVASSSTQTNDPSDTDPGATYDQIQGIVEPQGPAECFVVNWPLNRKELSEIVNKNTRRGKKESESEERSVSTSKKVTSLRIEAKEVENAEGNEITEANLSSSTELKEGESAEGSEEGENEGASLSCKTGDYRKAREKTKEYLKLDENKDKSTVATETIIEGARQEAETSKGAVFKIKSLKKNTREYEQANIKMNCEGEIVEKKENQSAQANVCKVNKEIDAIRNKSTDDDYPALFTQEDAAEVKKLVRELCEIIRDKKGSATNASALQEKLERLFHIRLSNGDTFLHMTLFKNQQSFEALVKTVHKANMSDLLNCSNNREETILHLALTYGDPNVVSLLVEKGCDPMARTIDEETCVHYAVRYGSEATLRALLDASARRGVSLELDARNAEQYTALHLCALEGNGACAALLRGRGAELCVRDGAGRTPLHLCAYDSRPHVARALITHASVTDVDAKDRRGLTALQVVCLRAPPDVEMAEVLLSAGADPRAAIAASRSHPRLDHILRRLLSPHTYTQLIDEAEQLSDDTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -