Lnig018510.1
Basic Information
- Insect
- Leuctra nigra
- Gene Symbol
- LZTR1
- Assembly
- GCA_934046545.1
- Location
- CAKOHC010001640.1:16939-39473[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.5e-12 1.3e-09 39.4 0.1 1 108 361 497 361 499 0.87 2 4 0.39 1.4e+02 3.9 0.2 76 108 497 529 494 531 0.88 3 4 1.7e-18 6e-16 59.8 0.1 8 96 590 678 583 693 0.86 4 4 0.54 2e+02 3.4 0.1 76 101 692 717 682 725 0.82
Sequence Information
- Coding Sequence
- ATGGCAATAGCCCAGCCAGTCAACTGTGATTTCGAGCACACATGGCCAGAAAATGCGGAAGGTCTCACTCTGGATTTCGGTCCATTCGAGACAGTCCACCGCTGGAAGCGAATGCCAGAGTGCGATGAATTTGTCGGCGCAAGACGAAGCAAGCACACGGTCGTCGCATACAAAGATGCAATCTACGTGTTCGGTGGAGATAACGGGAAGAGCATGCTGAATGATCTGCTGAGGTTTGATGTCAAGGAGAAGTCTTGGGGTCGAGCGTTTGCCACCGGAGCGCCACCAGCTCCAAGATACCATCATTCAGCAGTGGTGCACGACACGTCCATGTTTGTGTTCGGCGGCTACACGGGCGACATCCCCTCCAACTCGAACCTGACCAACAAGAACGACTTGTTCGAGTACAAGTTCCAGACCGGACAGTGGATCGAGTGGAAGTTCATCGGACGGACGCCTGTGCCGCGGTCCGCGCACGGTTGCGCCGTGTACGACAACAAGCTGTGGATATACGCCGGGTACGACGGCAATGCGAGGTTAGACGACATGTGGACCATTTCACTACTGGGGGATTCCCGGTCGTGGGAGGAGGTGACCCAGACGGGCGACTCCCCGCCGACGTGCTGCAACTTCCCTATCGCGGTCGCGCGGGACGCCATGTATGTCTTCAGCGGGCAGAGCGGTGCCAAGATCACCAACAGCCTGTTTCAGTACACCTTCAAGAACCAGTGCTGGACGCGCATCTCAACTGAACACATCCTGCGCGGCGCGCCGCCACCGCCCGCGCGCCGGTACGGCCACACGATGGTCGCATTCGACCGGCACCTGTACGTGTTCGGAGGAGCGGCTGACAGCACGATGCCCAACGACCTGCACTGCTACGACCTCGACACGCAGACGTGGACGGTGATCCCGCCCGCTTTGGAATCGCACATTCCTTCGGGCAGGCTGTTTCATGCCGCAGCCGTCAATGGAGATGCGATGTATGTCTTTGGCGGTACGGTTGACAACAACACGCGCTCCGGAGAGATGTACAGGTTCCAATTCTCCTGCTACCCGAAGTGCACGCTGCACGAGGACTTCGGCAAGCTGCTGGAGAGCCGGCAGTTCTGCGATGTGGAGTTCGTCATCGGGCCCGAGGAGGTGAAGCTGGTCGGACATGTGGCCGTCGTCGCCGCGCGCTCGGCCTTCCTACGCAACCGCATACGCCAGGCGCGCGAGACCAGAGAGCAGTTCGTCGAGAAGACGTACGGCGTCAACGGCGCGGTGAAGGAGAAGGACCTGCCGCTGCTGGAAGTGCTGCTCCGCGACGCCGTGCCCGAGGCCTTCGAGATGGTGCTCAACTTCATCTACACGGACCGCATCGACCCCACCAAGAAGGTCAACAATCTTGTCAATCCCATCGTGCTGCTCATGATGGACGTGTATCGGCTCGCCGTTCAGTTCAAGATGCGTCGGCTGGAGCAGCTGTGCGTGCAGTACCTGGAGGCCACGATCAGCCACAGCAACGTGCTCGAGGCTCTGCACAACGCCTCACAGTTGAAGCTCATGAAGCTCAAGGAGTTCTGCCTCAAGTTCATCGTCAAGGAGACCAACTACAACCAGATCGTGATGAGCCGGGAGTTCGAGACGCTCGAGCAGCCGCTCATGGTCGAGATCATCCGGCGCAGGCAGATGCCGCAGACTCGCTCCCTCATCGAGACGCAATACGATCACACAGGAACGACCTTGGAACAAGACATGGAGACTTTCCTGATGTGCGCCGGCAAGGAGTTCACGGACATAACGCTGATGCTGGACGGCATATCGATGTCGGCGCACAAGGCGGTGCTGGCGGCGCGCTGCAGCTACTTCGAGGCGATGTTCCGCTCCTTCATGCCGGAGGACAACATCGTGCAAATCCAGATCGGCGAGATGATCCCGTCCAAGCAGTCGTTCGACTCGCTGCTGCGCTACATCTACTACGCAGACGTGAACATGCCACCCGAGGACTCGCTCTACCTCTTCTCTGCGCCCTACTTCTACGGCTTCTCCAACAACCGGCTGCAGGCTTTCTGCAAGCAGAACCTCGAGATGAACGTCACATTCGAGAACGTGATACAGATCCTCGAGGCGGCCGACCGCATGCAGGCGCAGGATATGAAGAAGTACGCGCTCAATCTCATCGTTCACCACTTCTCCAAGGTCGCGAAGCTGGCGAAGATGCGGTCGCTGAGTCGCGAGTTGCTGCTCGACATCATCCAAGCGCTTGCCGAGGACATGAGCGAATCCAGGCTCTGTCAAGATCTCACCTACATCAGTCTCAACAGCGACTGCTAG
- Protein Sequence
- MAIAQPVNCDFEHTWPENAEGLTLDFGPFETVHRWKRMPECDEFVGARRSKHTVVAYKDAIYVFGGDNGKSMLNDLLRFDVKEKSWGRAFATGAPPAPRYHHSAVVHDTSMFVFGGYTGDIPSNSNLTNKNDLFEYKFQTGQWIEWKFIGRTPVPRSAHGCAVYDNKLWIYAGYDGNARLDDMWTISLLGDSRSWEEVTQTGDSPPTCCNFPIAVARDAMYVFSGQSGAKITNSLFQYTFKNQCWTRISTEHILRGAPPPPARRYGHTMVAFDRHLYVFGGAADSTMPNDLHCYDLDTQTWTVIPPALESHIPSGRLFHAAAVNGDAMYVFGGTVDNNTRSGEMYRFQFSCYPKCTLHEDFGKLLESRQFCDVEFVIGPEEVKLVGHVAVVAARSAFLRNRIRQARETREQFVEKTYGVNGAVKEKDLPLLEVLLRDAVPEAFEMVLNFIYTDRIDPTKKVNNLVNPIVLLMMDVYRLAVQFKMRRLEQLCVQYLEATISHSNVLEALHNASQLKLMKLKEFCLKFIVKETNYNQIVMSREFETLEQPLMVEIIRRRQMPQTRSLIETQYDHTGTTLEQDMETFLMCAGKEFTDITLMLDGISMSAHKAVLAARCSYFEAMFRSFMPEDNIVQIQIGEMIPSKQSFDSLLRYIYYADVNMPPEDSLYLFSAPYFYGFSNNRLQAFCKQNLEMNVTFENVIQILEAADRMQAQDMKKYALNLIVHHFSKVAKLAKMRSLSRELLLDIIQALAEDMSESRLCQDLTYISLNSDC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01289059;
- 90% Identity
- -
- 80% Identity
- -