Lnig024771.1
Basic Information
- Insect
- Leuctra nigra
- Gene Symbol
- Nr2e1
- Assembly
- GCA_934046545.1
- Location
- CAKOHC010002422.1:43327-49951[+]
Transcription Factor Domain
- TF Family
- ESR
- Domain
- zf-C4|ESR-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- This entry represents CLAVATA3/ESR (CLE)-related protein 14 from Arabidopsis thaliana (CLE14) and similar proteins predominantly found in plants. CLE14 is an extracellular signal peptide that regulates cell fate. It represses root apical meristem maintenance and functions as an elicitor of the root meristem differentiation through the CLV2/CRN complex signalling pathway. This protein inhibits irreversibly root growth by reducing cell division rates in the root apical meristem [1, 2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 8.3e-10 8.7e-06 26.8 0.0 19 112 200 316 179 325 0.75 2 8 2.2e-08 0.00024 22.1 0.1 78 112 331 365 319 374 0.88 3 8 2.4e-08 0.00025 22.0 0.1 78 112 380 414 371 422 0.88 4 8 2.3e-08 0.00024 22.0 0.1 78 112 429 463 417 471 0.88 5 8 2.3e-08 0.00024 22.0 0.1 78 112 478 512 468 521 0.88 6 8 2.4e-08 0.00025 22.0 0.1 78 112 527 561 519 569 0.87 7 8 7.7e-13 8e-09 36.7 0.1 78 123 576 621 570 625 0.91 8 8 9.7e-16 1e-11 46.2 0.0 160 269 649 772 634 774 0.92
Sequence Information
- Coding Sequence
- ATGAAGCAAGGTCTCCACTTGTTTACATATTATTGCACCTTGTTGCTAGCACTAGACTTAACTCCCCTGCAGAATGAATGCACGTCACCTGTAACTCCTTCCGCTAACAACAATCCCAATCATCCAGAAAAGACGCCGAATTGCTCTGTTGGGGTTCGCAAAACTGATTTCAAAACACCGGAAGTAGGAAGTACCGAGAGGAAACAACAACTCCCTGCGATCCAAGATGGAGCGGCCACTTGCAGCCCATTGAATCTCGCCGCCCTAAGCTGGGGGAGGGCGGGACGCTTAATCACCTACCTGATTTATACGTCGATTAAACTAATCAAGGGCGGCCAAATAACATGTCGAATTCTGTACGACATTCCTTGCAAAGTCTGTCAGGACCACTCTTCAGGGAAACACTACGGGATATTCGCATGTGACGGTTGCGCTGGATTCTTCAAGCGCTCGATCAGAAGGGCGAGACAGTACGTGTGCAAAGCCAAGTCCGAGGGGGGATGCATGGTGGACAAGACTCACAGGAACCAATGTCGCGCCTGCAGGCTCACCAAGTGTGTGCAAGCCGGCATGAACAAGGAAGCCGTGCAGCACGAACGCGGTCCTCGCAACTCGACGCTGCGCCGCCAGATGGCTCTGTACTTCAAGGAGCCGGAGTCGCCGACGTCTAGTGACGTGAtctcgacgtcgcgacgcacGCCGCCGCACCACGTGCTGGACCTGGCGCTGCCCAAGACGCCCCACCGCCCCCCGCCGCCACCGCATCACCTCCTCCAGCAGGCGGCGTACCTGTGTGCCAGAGCGCCGGCGCCAGTGTTCCAGCTGCCACAGCACAGCGCTGACACGGTGTGCGAGAGCGCTGCTCGCCTGCTGTTCATGAACGTGCAGTGGGCAAAGAGTGTTCCCGCCTTCACACAGCTGCACTACCGCGACCAACTGTTGCTGCTACTGTCCATGACACTTATCCAGCTGCCACAGCACAGCGCTGACACGGTGTGCGAGAGCGCTGCTCGCCTGCTGTTCATGAACGTGCAGTGGGCAAAGAGTGTTCCCGCCTTCACACAGCTGCACTACCGCGACCAACTGTTGCTGCTACTGTCCATGACACTTTTCCAGCTGCCACAGCACAGCGCTGACACGGTGTGCGAGAGCGCTGCTCGCCTGCTGTTCATGAACGTGCAGTGGGCAAAGAGTGTTCCCGCCTTCACACAGCTGCACTACCGCGACCAACTGTTGCTGCTACTGTCCATGACACTTTTCCAGCTGCCACAGCACAGCGCTGACACGGTGTGCGAGAGCGCTGCTCGCCTGCTGTTCATGAACGTGCAGTGGGCAAAGAGTGTTCCCGCCTTCACACAGCTGCACTACCGCGACCAACTGTTGCTGCTACTGTCCATGACACTTTTCCAGCTGCCACAGCACAGCGCTGACACGGTGTGCGAGAGCGCTGCTCGCCTGCTGTTCATGAACGTGCAGTGGGCAAAGAGTGTTCCCGCCTTCACACAGCTGCACTACCGCGACCAACTGTTGCTGCTACTGTCCATGACACTTTTCCAGCTGCCACAGCACAGCGCTGACACGGTGTGCGAGAGCGCTGCTCGCCTGCTGTTCATGAACGTGCAGTGGGCAAAGAGTGTTCCCGCCTTCACACAGCTGCACTACCGCGACCAACTGTTGCTGCTACTGTCCATGACACTTTTCCAGCTGCCACAGCACAGCGCTGACACGGTGTGCGAGAGCGCTGCTCGCCTGCTGTTCATGAACGTGCAGTGGGCAAAGAGTGTTCCCGCCTTCACACAGCTGCATTACCGCGACCAACTGTTGCTGCTGGAAGAGAGTTGGCGCGAGCTGTTCGTCTTGGGCGCCGCGCAGTTCCTGCTGCCCCTGGAGGTCGGCGCGCGCAGCCTCGGCCGCCACGACGCCCTCCTGCACGAGctgagagtgttccaggagacgCTGAGCAAGTTCGAGGCGCTCAGCGTCGACCCCCACGAGTACGCTTGTCTCAGAGCCATCGTGCTCTTCAAGACAGCGTTCGAGAACCAGTCGTCCGTGTCCTCTACATCTGGAAGTCCCGCGTGCGACAGCAAGAGCCTGCGCGAACCCAGTGCTGTCGCCGCGTTGCAAGATCACACGCAGCTGACGCTCAGCAAGTACATCAGCACTGCGCACCCCGCGCAGCCGTTCCGCTTCGGCAAGCTGCTGCTCCTGCTGCCCGCCCTGCGCGCCGTCTCCGCAGCGACCATCGAGGAGCTGTTCTTCAGGAGGACAATAGGACTCATTCCCATCGAGAGGATCATATGTGACATGTACAAGGCCACGGACTTGTAA
- Protein Sequence
- MKQGLHLFTYYCTLLLALDLTPLQNECTSPVTPSANNNPNHPEKTPNCSVGVRKTDFKTPEVGSTERKQQLPAIQDGAATCSPLNLAALSWGRAGRLITYLIYTSIKLIKGGQITCRILYDIPCKVCQDHSSGKHYGIFACDGCAGFFKRSIRRARQYVCKAKSEGGCMVDKTHRNQCRACRLTKCVQAGMNKEAVQHERGPRNSTLRRQMALYFKEPESPTSSDVISTSRRTPPHHVLDLALPKTPHRPPPPPHHLLQQAAYLCARAPAPVFQLPQHSADTVCESAARLLFMNVQWAKSVPAFTQLHYRDQLLLLLSMTLIQLPQHSADTVCESAARLLFMNVQWAKSVPAFTQLHYRDQLLLLLSMTLFQLPQHSADTVCESAARLLFMNVQWAKSVPAFTQLHYRDQLLLLLSMTLFQLPQHSADTVCESAARLLFMNVQWAKSVPAFTQLHYRDQLLLLLSMTLFQLPQHSADTVCESAARLLFMNVQWAKSVPAFTQLHYRDQLLLLLSMTLFQLPQHSADTVCESAARLLFMNVQWAKSVPAFTQLHYRDQLLLLLSMTLFQLPQHSADTVCESAARLLFMNVQWAKSVPAFTQLHYRDQLLLLEESWRELFVLGAAQFLLPLEVGARSLGRHDALLHELRVFQETLSKFEALSVDPHEYACLRAIVLFKTAFENQSSVSSTSGSPACDSKSLREPSAVAALQDHTQLTLSKYISTAHPAQPFRFGKLLLLLPALRAVSAATIEELFFRRTIGLIPIERIICDMYKATDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00894821; iTF_00894831; iTF_00894897;
- 90% Identity
- iTF_00894821; iTF_00894831; iTF_00894897;
- 80% Identity
- iTF_00894821; iTF_00894831; iTF_00894897;