Lnig029972.1
Basic Information
- Insect
- Leuctra nigra
- Gene Symbol
- -
- Assembly
- GCA_934046545.1
- Location
- CAKOHC010003277.1:41138-45024[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.007 59 4.8 0.2 19 32 22 35 13 40 0.84 2 25 0.0068 57 4.9 0.2 19 32 60 73 54 78 0.85 3 25 0.0068 57 4.9 0.2 19 32 98 111 92 116 0.85 4 25 0.0068 57 4.9 0.1 20 32 137 149 130 154 0.86 5 25 0.0068 57 4.9 0.2 19 32 174 187 168 192 0.85 6 25 0.0073 61 4.8 0.1 20 32 213 225 207 230 0.86 7 25 0.0073 61 4.8 0.4 20 32 251 263 245 274 0.85 8 25 0.0072 61 4.8 0.2 20 32 289 301 283 306 0.86 9 25 0.0068 57 4.9 0.2 19 32 326 339 320 344 0.85 10 25 0.0068 57 4.9 0.1 20 32 365 377 358 382 0.86 11 25 0.0068 57 4.9 0.1 20 32 403 415 396 420 0.86 12 25 0.0072 61 4.8 0.2 20 32 441 453 435 458 0.86 13 25 0.011 92 4.2 0.1 19 31 478 490 472 494 0.86 14 25 0.0068 57 4.9 0.2 19 32 516 529 510 534 0.85 15 25 0.0068 57 4.9 0.1 20 32 555 567 548 572 0.86 16 25 0.0082 69 4.6 0.2 20 31 593 604 587 607 0.85 17 25 0.0072 61 4.8 0.2 20 32 631 643 625 648 0.86 18 25 0.0068 57 4.9 0.2 19 32 668 681 662 686 0.85 19 25 0.0068 57 4.9 0.2 19 32 706 719 700 724 0.85 20 25 0.0082 69 4.6 0.2 20 31 745 756 739 759 0.85 21 25 0.0072 61 4.8 0.2 20 32 783 795 777 800 0.86 22 25 0.0068 57 4.9 0.2 19 32 820 833 814 838 0.85 23 25 0.0068 57 4.9 0.2 19 32 858 871 852 876 0.85 24 25 0.0068 57 4.9 0.2 19 32 896 909 890 914 0.85 25 25 0.022 1.9e+02 3.2 0.2 20 32 935 947 929 952 0.86
Sequence Information
- Coding Sequence
- ATGATGCCGGTGCGCTGGGCAGAGCCATCTCGACACGACCCGAGCAAATACTCAGCGATCATCAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCATCAGAGTAAACATATTAATACGCTCAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCATCAGAGTAAACATATTAATACGCTCAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCATCAGAGTAAACATATTAATACGCTTAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCATCAGAGTAAACATATTAATACGCTCAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCATCAGAGTAGACATATTAATACGCTTAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCATCAGAGTAGACATATTAATACGCTCAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTCGACACGACCAGAGCAAATACTCAGCGATTATCAGAGTAGACATATTAATACGCTCAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTAGACACGACCCGAGCAAATACTCAGCGATCATCAGAGTAAACATATTAATACGCTCAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCAGCAGAGTAAACATATTAATACGCTTAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCATCAGAGTAAACATATTAATACGCTTAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCATCAGAGTAGACATATTAATACGCTCAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTCGACATGACCCGAGCAAATACTCAGCGATCATCAGAGTAAACATATTAATACGCTCAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCTATCTAGCGGAGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCATCAGAGTAAACATATTAATACGCTCAAGACACCGAGTCATTTGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCATCAGAGTAAACATATTAATACGCTTAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCATCAGAGTAGACATATTAATACGCTCAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGGGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCATCAGAGTAGACATATTAATACGCTCAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCATCAGAGTAAACATATTAATACGCTCAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCATCAGAGTAAACATATTAATACGCTCAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCATCAGAGTAGACATATTAATACGCTCAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGGGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCATTAGAGTAGACATATTAATACGCTCAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCATCAGAGTAAACATATTAATACGCTCAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCATCAGAGTAAACATATTAATACGCTCAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCATCAGAGTAAACATATTAATACGCTCAAGACACCGAGTCATATGCAACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCATCAGAGTAGACATATTAATACGCTCAAGACACCGAGTCATATGCTACTGGAAGAAATGCCAGAGCCATCTAGCGGAGAGATCTCGACACGACCCGAGCAAATACTCAGCGATCATCAGAGTAAACACATTAATACGCGGTCATAagtggaggggtggggtggaCAGTATGCGACTTGGGTCTACTAAGTAG
- Protein Sequence
- MMPVRWAEPSRHDPSKYSAIIRHRVICNWKKCQSHLAERSRHDPSKYSAIIRVNILIRSRHRVICNWKKCQSHLAERSRHDPSKYSAIIRVNILIRSRHRVICNWKKCQSHLAERSRHDPSKYSAIIRVNILIRLRHRVICNWKKCQSHLAERSRHDPSKYSAIIRVNILIRSRHRVICNWKKCQSHLAERSRHDPSKYSAIIRVDILIRLRHRVICNWKKCQSHLAERSRHDPSKYSAIIRVDILIRSRHRVICNWKKCQSHLAERSRHDQSKYSAIIRVDILIRSRHRVICNWKKCQSHLAERSRHDPSKYSAIIRVNILIRSRHRVICNWKKCQSHLAERSRHDPSKYSAISRVNILIRLRHRVICNWKKCQSHLAERSRHDPSKYSAIIRVNILIRLRHRVICNWKKCQSHLAERSRHDPSKYSAIIRVDILIRSRHRVICNWKKCQSHLAERSRHDPSKYSAIIRVNILIRSRHRVICNWKKCQSYLAERSRHDPSKYSAIIRVNILIRSRHRVICNWKKCQSHLAERSRHDPSKYSAIIRVNILIRLRHRVICNWKKCQSHLAERSRHDPSKYSAIIRVDILIRSRHRVICNWKKCQSHLAGRSRHDPSKYSAIIRVDILIRSRHRVICNWKKCQSHLAERSRHDPSKYSAIIRVNILIRSRHRVICNWKKCQSHLAERSRHDPSKYSAIIRVNILIRSRHRVICNWKKCQSHLAERSRHDPSKYSAIIRVDILIRSRHRVICNWKKCQSHLAGRSRHDPSKYSAIIRVDILIRSRHRVICNWKKCQSHLAERSRHDPSKYSAIIRVNILIRSRHRVICNWKKCQSHLAERSRHDPSKYSAIIRVNILIRSRHRVICNWKKCQSHLAERSRHDPSKYSAIIRVNILIRSRHRVICNWKKCQSHLAERSRHDPSKYSAIIRVDILIRSRHRVICYWKKCQSHLAERSRHDPSKYSAIIRVNTLIRGHKWRGGVDSMRLGSTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -