Lnig038490.1
Basic Information
- Insect
- Leuctra nigra
- Gene Symbol
- Nfat5
- Assembly
- GCA_934046545.1
- Location
- CAKOHC010005624.1:8808-14595[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-32 5.1e-28 99.3 0.6 1 168 145 304 145 305 0.94 2 2 0.67 9.3e+03 -2.4 0.0 48 69 386 407 381 428 0.73
Sequence Information
- Coding Sequence
- ATGTTCAAAGTACTTGTTCATGAGGATTACCTACAACCTGCTATCTGCTTGATTCCAGCTGGCCCTCCGGAGTACCAGACCACTGATCCTTGTGACAGCTCCAATGACTCTGGCCTCGGGCTGGAGCATCATGTTGAGCTGCCGCGGCCGTCGGCTCGACTGTGGTGCACTGACGTCGGAGTGCCGGCCAAGCGCAAGAAGCTGGAGATCAAACAAGAGTCCGATGACGCCAACGATAACTTCACCTTCGAGGAGACGATCAACCAAGCGAAGAGGAGTCCGCTAGAAATGCAGCTGTTAATGCCAGTTCTGGAGCGCGTGTCGGCGCCTCGCCCGAGCGCTCACCGTGTGACGGTGCGACGACCAGCACTGACAGCTGTTCAGCGCCGAGTTGGACCTGCGCTGCAACTTCTCGCGGCAACGAAACCTCATCTGCAGATACTCAGTCAGCCTGAGCAACAGCATCGAGCAAGATATCAGACTGAGGGCAGCCGAGGGGCTGTCAAGGATAGGACAGGCAATGGCTTCCCTACTGTCAAGCTGGTGGGCTACGAAGGTCAGGCTGTACTGCAGGTGTTCATTGGCAGCGACCTAGGCCGCGTCGTGCCTCATATGTTCTACCAAGCGTGCCGAGTTAGCGGCAAGAACTCAACGCCGTGCACGGAGAAGAACGTAGACGGCACTGTCGTCATCGAGGTGGAGTTCGAACCATCCAAGGACAACGTCATCACGTGTGACTGCGTAGGGATCCTGAAGGAGCGCAATGTGGACGTGGAGCACCGGTTCCCAGAGCAGTCCGGCCCGCGCAACAAGAAGAAGTCCACCCGGTGTCGAATGGTCTTCCGGACTGTAATCACGCATCCGGACGGGACGGAGGAGACACTGGAGATCTCGTCGCAACCCATTGTTTGCACTCAGCCTCCCGGCATCCCCGAGATCTGCAAGAAGTCTCTGGTGTCCAGTCCGTGCACCGGCGGTCAAGAGCTATTCATCCTCGGCAAGAACTTCCTCAAGGACTCTCGCGTGGTCTTCTCCACGTGCGAGTCTCAGCCGCAGTTGCCGCTGTGGGAGGTTGCGGTCCAGCCAGACAAGGAATATCTTCAGCAGTCTCACTTGGTGTGTGTGGTGCCTCCATACCGAGACGTGGACCTGACGGATCCCGTGACCGTGCGGCTATCCATCGTGTCGAGTGGGAAGACAAGCGAGTCGCACTCGTTCCGCTACATGCCACAGCATCATCAAGGTAGGAGAGACATGCAGTCAACAGCCGTCGAGGCGGCCAGCAATGGGAGGCCTGAGATCCACGCCACAATGCCGGGATCATTTATCACTCGCTTTGTATTGCTGCAACAGCTTTCACGTCAAAGTACATTTTACAGAATTCATCTCTAG
- Protein Sequence
- MFKVLVHEDYLQPAICLIPAGPPEYQTTDPCDSSNDSGLGLEHHVELPRPSARLWCTDVGVPAKRKKLEIKQESDDANDNFTFEETINQAKRSPLEMQLLMPVLERVSAPRPSAHRVTVRRPALTAVQRRVGPALQLLAATKPHLQILSQPEQQHRARYQTEGSRGAVKDRTGNGFPTVKLVGYEGQAVLQVFIGSDLGRVVPHMFYQACRVSGKNSTPCTEKNVDGTVVIEVEFEPSKDNVITCDCVGILKERNVDVEHRFPEQSGPRNKKKSTRCRMVFRTVITHPDGTEETLEISSQPIVCTQPPGIPEICKKSLVSSPCTGGQELFILGKNFLKDSRVVFSTCESQPQLPLWEVAVQPDKEYLQQSHLVCVVPPYRDVDLTDPVTVRLSIVSSGKTSESHSFRYMPQHHQGRRDMQSTAVEAASNGRPEIHATMPGSFITRFVLLQQLSRQSTFYRIHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -