Basic Information

Insect: Leuctra nigra
Gene Symbol: -
Assembly: GCA_934046545.1
Location: CAKOHC010004171.1:52657-69017[-]

Transcription Factor Domain

TF Family: CSL
Domain: BTD domain
PFAM: PF09270
TF Group: Beta-Scaffold Factors
Description: Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.052 7.3e+02 1.4 0.0 37 59 232 254 227 261 0.88

2 7 0.049 6.9e+02 1.5 0.0 37 59 274 296 267 303 0.88

3 7 0.049 6.9e+02 1.5 0.0 37 59 316 338 309 345 0.88

4 7 0.049 6.9e+02 1.5 0.0 37 59 358 380 351 387 0.88

5 7 0.049 6.9e+02 1.5 0.0 37 59 400 422 393 429 0.88

6 7 0.049 6.9e+02 1.5 0.0 37 59 442 464 435 471 0.88

7 7 2.4e-05 0.34 12.2 0.0 37 98 484 548 477 559 0.86

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.052	7.3e+02	1.4	37	59	232	254	227	261	0.88
2	7	0.049	6.9e+02	1.5	37	59	274	296	267	303	0.88
3	7	0.049	6.9e+02	1.5	37	59	316	338	309	345	0.88
4	7	0.049	6.9e+02	1.5	37	59	358	380	351	387	0.88
5	7	0.049	6.9e+02	1.5	37	59	400	422	393	429	0.88
6	7	0.049	6.9e+02	1.5	37	59	442	464	435	471	0.88
7	7	2.4e-05	0.34	12.2	37	98	484	548	477	559	0.86

Sequence Information

Coding Sequence: ATGAGGTACATCCCAACAGCTCGAGGGGTGCTGCAATTCCCTGGCGACGGTCGAGGGATCCTAATGCACTCTCTGATAGGAGACGGGCTGGTTGCGATTCAAGGCTTCTGCTCCGCGACGAGAGACTACTGTCCTCCCGGCCCTCCCGGATCTCCCGGTCTTCCGGGATCAGCCGGTCAACGCGGAGCCGACGGGAACAAGGGCGACCGCGGAGACAGAGGGTTCCCGGGGGAAGAAGGTAAACGTGGTGCTACTGGTAACCACGGAGAACCAGGACCCAGAGGGCCTGAAGGAGAAGGAGGATCACCGGGAACGTCTGGACTAGATGGAAGAGATGGCGTGCCAGGAGAGCCTGGGCTCGACGGAATTCCTGGAAGAAATGGACTTGATGGAATACCGGCAATGGATGGATTACCAGGATTGAATGGAATTCCGGGAACACCAGGGACGAATGGGAGTGATGGTCGACCCGGACTTCTGGGGCCTCCGGGGCCGCTCGGACCAAAGGGACCTCGCGGAATGACAGGTCCTCGAGGTCGACCTGGCAAGTCGGGAATAAACGGGATGCCAGGAATCCCTGGAATAAACGCTTGGACAGTGAAGATAAACGGGACGACGAGCAGTGAGCTGCTTATCCCACCATCGATTGCAGGTTCCGTGCCCATGATGCCGCAGCAACCGCAGCTGATAACCGTGCGAGAAGGAGATAACGTGAGGCTGCGATGCGCTGCCACGGGAACTCCGCTACCCAATGTGTACGTGAACATGATGTGTGCAGGTTCCGTGCCCATGATGCCGCAGCAACCGCAGCTGATAACCGTGCGAGAAGGAGATAACGTGAGGCTGCGATGCGCTGCCACGGGAACTCCGCTACCCAATGTGTACGTGAACATGATGTGTGCAGGTTCCGTGCCCATGATGCCGCAGCAACCGCAGCTGATAACCGTGCGAGAAGGAGATAACGTGAGGCTGCGATGCGCTGCCACGGGAACTCCGCTACCCAATGTGTACGTGAACATGATGTGTGCAGGTTCCGTGCCCATGATGCCGCAGCAACCGCAGCTGATAACCGTGCGAGAAGGAGATAACGTGAGGCTGCGATGCGCTGCCACGGGAACTCCGCTACCCAATGTGTACGTGAACATGATGTGTGCAGGTTCCGTGCCCATGATGCCGCAGCAACCGCAGCTGATAACCGTGCGAGAAGGAGATAACGTGAGGCTGCGATGCGCTGCCACGGGAACTCCGCTACCCAATGTGTACGTGAACATGATGTGTGCAGGTTCCGTGCCCATGATGCCGCAGCAACCGCAGCTGATAACCGTGCGAGAAGGAGATAACGTGAGGCTGCGATGCGCTGCCACGGGAACTCCGCTACCCAATGTGTACGTGAACATGATGTGTGCAGGTTCCGTGCCCATGATGCCGCAGCAACCGCAGCTGATAACCGTGCGAGAAGGAGATAACGTGAGGCTGCGATGCGCTGCCACGGGAACTCCGCTACCCAATGTGGAGTGGCGCAAGTTGGACCCCACGCCGATTCCGCTGGGCGCTTGGAAAACCGTGTCAGTGTCAGGTCATACACTGAATATCACGCGAATCAATCGAGAGCACATGGGTTCGTATCTCTGCATCGCGGATAACGGAGTCCCGCCGCAAACCAATCAGACTTTCAAGCTGGAAGTGCATTTCCCGCCGATGATTCACATCCAGAACCAGATCGTGGGCGCCGTCAACGGCTCAACGGCAGTCCTGGAATGCGACGTGCAGGCGTATCCCGAAGCGGTCAGATACTGGGAGAGATCCGACGGAAGACTTCTGGAACCCGGCGACAAATATCGCATGCGATATCAAGAACTCGGCCGATATCAGGGCAAGATGACGCTGAATCTGACTCGCTTCAGTGCTGAGGACGCTGGACAATATCATTGCATATGCAAGAACGAGCTCGGAATCACGAAGGGGATCTTTACTCTGCAAGCGCTGTCGCGAGTCCCATGTGTGAGAACCCGTCTTCTACGTCACATGCTCCTGAGGGACGATTCCAGCGTGGCTGGACGAGTATTCGGCGACAATGACGGATTGGCCGCGGGAAAAAGAAATGCAACGCAGACACGTGAAAACAAAAGCTAA
Protein Sequence: MRYIPTARGVLQFPGDGRGILMHSLIGDGLVAIQGFCSATRDYCPPGPPGSPGLPGSAGQRGADGNKGDRGDRGFPGEEGKRGATGNHGEPGPRGPEGEGGSPGTSGLDGRDGVPGEPGLDGIPGRNGLDGIPAMDGLPGLNGIPGTPGTNGSDGRPGLLGPPGPLGPKGPRGMTGPRGRPGKSGINGMPGIPGINAWTVKINGTTSSELLIPPSIAGSVPMMPQQPQLITVREGDNVRLRCAATGTPLPNVYVNMMCAGSVPMMPQQPQLITVREGDNVRLRCAATGTPLPNVYVNMMCAGSVPMMPQQPQLITVREGDNVRLRCAATGTPLPNVYVNMMCAGSVPMMPQQPQLITVREGDNVRLRCAATGTPLPNVYVNMMCAGSVPMMPQQPQLITVREGDNVRLRCAATGTPLPNVYVNMMCAGSVPMMPQQPQLITVREGDNVRLRCAATGTPLPNVYVNMMCAGSVPMMPQQPQLITVREGDNVRLRCAATGTPLPNVEWRKLDPTPIPLGAWKTVSVSGHTLNITRINREHMGSYLCIADNGVPPQTNQTFKLEVHFPPMIHIQNQIVGAVNGSTAVLECDVQAYPEAVRYWERSDGRLLEPGDKYRMRYQELGRYQGKMTLNLTRFSAEDAGQYHCICKNELGITKGIFTLQALSRVPCVRTRLLRHMLLRDDSSVAGRVFGDNDGLAAGKRNATQTRENKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -