Basic Information

Insect: Leucozona laternaria
Gene Symbol: -
Assembly: GCA_932273905.1
Location: CAKNZR010000630.1:622765-629658[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.4e-05 0.0079 17.9 2.1 1 23 402 424 402 424 0.96

2 18 1.1e-05 0.0021 19.7 0.4 1 23 430 452 430 452 0.97

3 18 2.2e-05 0.004 18.8 0.5 1 23 458 480 458 480 0.98

4 18 1.9e-05 0.0034 19.1 3.1 1 23 486 508 486 508 0.97

5 18 4.3e-05 0.0076 17.9 4.7 1 23 514 536 514 536 0.99

6 18 7.8e-05 0.014 17.1 5.7 1 23 542 564 542 564 0.97

7 18 2.2e-07 3.9e-05 25.2 4.3 1 23 570 592 570 592 0.98

8 18 1.4e-07 2.5e-05 25.8 2.4 1 23 598 620 598 620 0.97

9 18 0.00018 0.033 16.0 5.7 1 23 626 648 626 648 0.97

10 18 2.3e-05 0.0041 18.8 6.5 1 23 654 676 654 676 0.98

11 18 3.9e-06 0.00069 21.2 4.5 1 23 682 704 682 704 0.98

12 18 9e-06 0.0016 20.1 8.1 1 23 710 732 710 732 0.98

13 18 2.2e-06 0.00039 22.0 7.9 1 23 738 760 738 760 0.98

14 18 8.2e-07 0.00015 23.4 7.7 1 23 766 788 766 788 0.98

15 18 0.00026 0.046 15.5 9.5 1 23 794 817 794 817 0.95

16 18 0.00022 0.039 15.7 0.5 1 23 823 845 823 845 0.97

17 18 0.00096 0.17 13.7 4.4 1 23 855 877 855 877 0.98

18 18 8e-06 0.0014 20.2 1.7 1 23 883 906 883 906 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.4e-05	0.0079	17.9	2.1	1	23	402	424	402	424	0.96
2	18	1.1e-05	0.0021	19.7	0.4	1	23	430	452	430	452	0.97
3	18	2.2e-05	0.004	18.8	0.5	1	23	458	480	458	480	0.98
4	18	1.9e-05	0.0034	19.1	3.1	1	23	486	508	486	508	0.97
5	18	4.3e-05	0.0076	17.9	4.7	1	23	514	536	514	536	0.99
6	18	7.8e-05	0.014	17.1	5.7	1	23	542	564	542	564	0.97
7	18	2.2e-07	3.9e-05	25.2	4.3	1	23	570	592	570	592	0.98
8	18	1.4e-07	2.5e-05	25.8	2.4	1	23	598	620	598	620	0.97
9	18	0.00018	0.033	16.0	5.7	1	23	626	648	626	648	0.97
10	18	2.3e-05	0.0041	18.8	6.5	1	23	654	676	654	676	0.98
11	18	3.9e-06	0.00069	21.2	4.5	1	23	682	704	682	704	0.98
12	18	9e-06	0.0016	20.1	8.1	1	23	710	732	710	732	0.98
13	18	2.2e-06	0.00039	22.0	7.9	1	23	738	760	738	760	0.98
14	18	8.2e-07	0.00015	23.4	7.7	1	23	766	788	766	788	0.98
15	18	0.00026	0.046	15.5	9.5	1	23	794	817	794	817	0.95
16	18	0.00022	0.039	15.7	0.5	1	23	823	845	823	845	0.97
17	18	0.00096	0.17	13.7	4.4	1	23	855	877	855	877	0.98
18	18	8e-06	0.0014	20.2	1.7	1	23	883	906	883	906	0.96

Sequence Information

Coding Sequence: ATGTTACAGCAACATGTCCAGCAACACCATCACGAAAATCCTACTGGCGGTATTAGCGGAGTTGTTCATCCTGTTGGCGGGATCGAGTCAGATGTATCCAAACAACAACATCCACACCATCAGCCATCACACCTATCGGGTCCCCAACAACATCTTGGAAAATACTGGGTTGTTACGAATCTTTTTCAGGGTCCCGGTCAGCCGCCATACAATATTGGTGTAACACCAACAACTTCAGCAGTTCCTTCAATACCGCCTCCGATATCATCGCATTCAAGCGCTTCGGCAGCCAAGGCAGCTAACTCTAAGCAGCAACAGCAAGATCAACAACAGCAACAGCAACTAGCATCAAACTCGCACACTCAATCACCATCAGCACATATTGTTTCATCTGTTGGTGCTACATCTCTACAAATACCCAATCCAATGATAAATACGGGAATGAACCAGCATCAGCTTCCAAACGGCACAATAATCGCAGGCCCACGTCATCCGGATTCTTTACACGTTCATGGAACGATGTCCGGCGACGACAATCGACACGTCTCACACGGTATGCAGGACATTAAAGAGGAAAAACCTTTTGCCAATGGCAAGCCAAACATACATATGGCTCATGTCAATCCAGCATCTTCCATTTCGTCAAAAATGAATTCTGTCAGTGGTGGCAACGGTGGAAACAATGGCCAATCAACTGAACCGGGTAGTCAAATGGTCAAACTACAGACAGGTTCTGTCCCTGGTGCCGGTAGTAGTGGAGGAGGTAACGAACAAGAAAGCAAACCACCCCACGGCGTTGAAATGTATAAAGTCAATATTGAAGACTTGAGTCAATTTCTATCATATCACGAAGTCTTTGGCAAGATCCATGGGGAAGTAATAAATCAACAGCAAATATCGCACACGGTAACTCATCCTACTACGAATGTATCGACTTCAAATGCTGGCGGAAACACCTCAGTGAGTGGTTCTGTTTCTGGCGCACTACCTCCACCACCGTCGACTAATGGAAACTCGATAGTGTCAACCAATAGCCTAACAAGTTCAGGAACTGGTGCGCAAGCAGTTCCACCAACAGGCACCACTGGTGTACCAGCTGCACCTGGCGAACTTATTCTACCCAAGATGGAAAATCAAGGGATGGGTGTTGATCAGAACACACCACTGCTTGCACCAGATGGAACACCCATCATGGGCGGCACGCATATCTGTGACATCTGCGGCAAAATGTTCCAATTTCGTTATCAGTTAATTGTGCATCGCCGTTATCACAGTGAACGCAAGCCATTTAACTGTCAAGTTTGTGGACAGGGATTCACTACATCGCAAGATCTCACACGACATGGTAAGATTCACATTGGCGGACCAATGTTCACGTGTGTGATTTGTTTCAATGTGTTTGCCAATAATGCCAGCTTGGAGCGGCACATGAAACGCCATTCGACGGACAAACCTTTTGCGTGTACCATATGCCAGAAGACATTTGCCCGCAAAGAGCACCTGGACAACCACTTTCGCAGTCATACGGGTGAGACGCCGTTCCGTTGCCAGTATTGTGCGAAAACCTTTACCCGAAAAGAACACATGGTGAATCATGTGCGTAAGCATACCGGGGAGACGCCACATCGTTGCGATATCTGTAAGAAATCTTTTACGAGGAAAGAACACTATGTTAATCATTACATGTGGCACACAGGTCAGACACCGCATCAGTGTGACATATGTGGCAAGAAATATACAAGGAAGGAACACCTGGCCAATCATATGCGTTCACATACGAATGATACACCATTCCGGTGTGAGATTTGTGGAAAGAGTTTTAGCAGAAAGGAACATTTCACCAATCACATTTTGTGGCATACAGGAGAAACCCCTCATCGCTGTGATTTCTGTGCGAAGACGTTCACCAGGAAGGAGCACCTATTGAACCATGTCCGCCAACATACGGGTGAGTCACCACATCGCTGCACCTATTGCTTGAAGACCTTCACTCGTAAGGAACACCTAGTGAATCACATTCGTCAACACACAGGCGAAACACCCTTCAAGTGCACCTACTGTACCAAGGCTTTCACACGGAAGGATCATATGGTAAATCACATCCGTCAACATACTGGAGAATCACCACATAAATGCACCTACTGCACGAAAACTTTCACCCGGAAAGAGCATCTGACCAACCATGTGCGCCAACATACCGGTGAGTCGCCACATCGTTGCACCTACTGCAAAAAAACGTTTACACGCAAGGAACACCTAACCAATCACATCCGGTTGCATACAGGCGATTCGCCCCACAAATGCGAATACTGCCAAAAGACGTTCACACGTAAAGAGCATCTGAACAATCATATGCGGCAGCATTCAAGTGACAATCCGCACTGCTGCAATGTGTGCAACAAGCCGTTTACACGCAAGGAGCATCTGATCAATCATATGTCGCGTTGTCATACCGGCGATCGACCATTTGCTTGCGAGACTTGTGGTAAAAGTTTCCCCCTCAAAGGCAACTTGCTCTTCCATCAACGCAGCCACACCAAAGGTCAGGAGTGTGAACGTCCATTTTCTTGCGAGAAATGCCCGAAAAATTTCATTTGCAAAGGTCATTTGGTGTCACATATGCGATCCCATTCTGGAGAAAAGCCACATGCTTGCACCATGTGCAGCAAGGCATTTGTAGAAAGAGGGAATCTCAAACGTCACATGAAGATGAATCATCCGGATGCTGTTATGCCTCCACCTCCAACACCTTTACCCGGGCTCCTGACACAAATTAAACAGGAAATCAAGCCAATTATAATTCCTCATCAACCCCCAACCATGCATACGATACAACAAATCACTTCAACTGCAGGCAGCACAAGTGCAAATAATCCTGGAAATCCCGCCCTTCTGGCACCTGGTTTGGTTCcaatggttacatctactattacttcacacataaagcagcaaacccacttacaacaacagcagcagcagcaacagcaccaacatcaacatcaactgcaacaacaacaacaacagcttttgcagctgtcgatacagcaagcagctcaacatcaacaagctgagcatcggcaacagcagcagcaacaacaacaacaacaacagcagcagcagcaacaagtccaacaacagcagcagcaacaagtccaacaacaacagcagcaacatcaacagcaaagtcatcaacaacaccaacaacaacaagctcaacaacaatcgcaacagcaatcacaacagcatcaacagcctcaaccgccttcagtgccgttagctctcattggagccgatccctcagctatagctCGAGCTGCTATGCAACTACAACATTTGCCAACCAATGTCGAACAACATCCAGTGGTTTATTAA
Protein Sequence: MLQQHVQQHHHENPTGGISGVVHPVGGIESDVSKQQHPHHQPSHLSGPQQHLGKYWVVTNLFQGPGQPPYNIGVTPTTSAVPSIPPPISSHSSASAAKAANSKQQQQDQQQQQQLASNSHTQSPSAHIVSSVGATSLQIPNPMINTGMNQHQLPNGTIIAGPRHPDSLHVHGTMSGDDNRHVSHGMQDIKEEKPFANGKPNIHMAHVNPASSISSKMNSVSGGNGGNNGQSTEPGSQMVKLQTGSVPGAGSSGGGNEQESKPPHGVEMYKVNIEDLSQFLSYHEVFGKIHGEVINQQQISHTVTHPTTNVSTSNAGGNTSVSGSVSGALPPPPSTNGNSIVSTNSLTSSGTGAQAVPPTGTTGVPAAPGELILPKMENQGMGVDQNTPLLAPDGTPIMGGTHICDICGKMFQFRYQLIVHRRYHSERKPFNCQVCGQGFTTSQDLTRHGKIHIGGPMFTCVICFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGESPHRCTYCKKTFTRKEHLTNHIRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQECERPFSCEKCPKNFICKGHLVSHMRSHSGEKPHACTMCSKAFVERGNLKRHMKMNHPDAVMPPPPTPLPGLLTQIKQEIKPIIIPHQPPTMHTIQQITSTAGSTSANNPGNPALLAPGLVPMVTSTITSHIKQQTHLQQQQQQQQHQHQHQLQQQQQQLLQLSIQQAAQHQQAEHRQQQQQQQQQQQQQQQQVQQQQQQQVQQQQQQHQQQSHQQHQQQQAQQQSQQQSQQHQQPQPPSVPLALIGADPSAIARAAMQLQHLPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00426545;
90% Identity: iTF_00976727;
80% Identity: -