Llat016098.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leucozona laternaria
Gene Symbol
RAP1GAP
Assembly
GCA_932273905.1
Location
CAKNZR010000362.1:1212218-1237047[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.00029 0.13 13.8 0.0 6 43 587 627 584 647 0.85
2 2 3.1e-08 1.4e-05 26.6 0.0 50 108 761 819 751 821 0.91

Sequence Information

Coding Sequence
ATGATCCCTAATCTTGAGGCTGCACACAATACTGTCACCTTGTCCGAGTGTAGAGAACCATCCCCGCTTTATGATAATAACCATTATCACGAGGAATGTCTCAGATGCAACTCATGCGGTTTGAATTTGACCGGCCCCAACCAGAAACGAGCAAGAAGGTTCAAGAACCATATTCTCTGCGACTTGCATTTTGCAGACGTTGCCCTAATGGAGTGCTCAGATTTTATGCAGCAGCTAAGAAGCTTCAAACCCCAATCACTTGGATGTGCCGTTGCCAGGCGCAAGAGCTCAACAACATTAATTTTTCCACTGCCACCGCAGGCATGTTCAGATGAATTTTGCGAAGAATATCCTCACAATCTTATGCCCACTCCTGGTTATTGGATTGAGTGTTCCAGGCAAAAAATATCATTGCCCAACCAGAATTCCTTGTGGGACGAAAGTGACTCAGAGCATGAAGATATTCGGGTAGGCAGTTCTTCTGATGCTTATTTGGAGCGTGAATGCAGTGACCTTTATGAAGACGATGAAGATTCCGAAGCAACGCCAAGTCCTAGGAAAAAGACAACAATTGAAGAGCAATGGGATCAGCAAGGCGCTTTCGAATTAATATCAGTTGAACAAGAGACATATGAGAAATACTTCTTTGGAACAGAACATTGGAACTATTTTACAAGCGATGAGGATCTTGGTCCAGTGATATTATCTATTAAACAAGAGACATTAAATGGGCGTGACCAGTTTCGGATATTAGTAAGAGCTGGTTCCTATACTGTCCATGGACTGATACCGGCTTCATGTGTTTTTGCTGATAGGTACAACCGTGAAGAAGTAGTTAGATCATTAGGTAAAGAAGTAAATTTAAATCCGCCTTTAACTTTAGGTCAGTTACCAGATACTCCAGAAGAACTTTTAAAGTTGGATCAAGTTTTTATTAAATCTGAACTTAAAGTTGGTGTAATCTTTGTTAAAGAAGATCAATATAGTGAGGAGCAGATATTAGACAATAATGAAAATTCATCGTTATTTGAAGAATTTCTACAGCTATTAGGTGATAGGTGTAGACTTCGCGGTTTCGATAAGTACAAAGGTGGCCTTGATACTGTCCATGATTTGACAGGACTTTATTCAGTTTACACAAACTGGCGTAATATTGAAATAATGTTTCATGTGTCAACATTACTGCCCTATGAGAAGCATGATCCGCAAAAACTTCAACGCAAACGTCATATCGGCAACGATATTGTTTGTGTTGTGTTCTTAGAAGCTGACAATACACGTTTTAGTCCGGCTTGCATAAAAAGTCATTTTCTACATACGTTTATTTTGGTTCGAGTATCTGCAAGGATTAAACACAAGCCCACCAGGTATGAAGTTTCTGTAGTGACAAGAGATGAAGTTGGTGCCTATAAGCCTTATTTGTGGGAACAATCTGTTTTCGAGAAAGGACCCATGTTTCGTGAGTGGTTATTGACAAAAATTGTTAACGGTGAACGTGCCTCGTATTCAGCTCCTAAATTCGCCCGAATGCAAGAAAGAACACGTTCGCAGATGCTAGAAGATTTGGTAATGAACCTTTCAAATCATGCAGAAACTGGTCAAATCCCTAAACCCTACCGCAGAGGTTCATGGCGACCCATCGGGCACATGCGACCTTCATCACCACTACTTGACTCAGTGCGCGATCAATTTGAAGACTATGATCAGTTGGCTAAGGACTTTACACGTGTTTTTCTCAACGAGGAGCCATTATGTCTGCAAAATGCTCATTTATTTGATGTCGTCTTTTTGGTTGGCCAGTCAAAGCAGAAAGCTCGCTTTATTGGTGTCCGGGCGATACTCGGAGTGCGGAGCCGAGTTTTTCAAGAAATGCTCTATGGAATTCAAACTGGTTTTGGGTCTCCACAAATTCCGGTTGCTGAAATTTTCGCTCGGCCGGCTCCATCATTAGTTTCACCGCAAAATCAGAAGCCGAAAAGCAATAATTACCTTACTGTTCCCGATATTGAATCAGCTCGGCCGAAAAGTGTACCCTCATCGCCTATGGTTAAACGAGCCTTCTCTCGCCTTGGAACAATTACCGCTGGTTGGGGCCGATCAATAAGAAATAAAAATACCCAATTAAATCCTGAGGATAAAAAAAAGTGGATATCTTCACAGGATTGTTCGAATCGAGAAAGTAAAGATAAAGATGGAAAGGATAAGCCTGGTAACAATCAGCTAGCCGTTCCAAGGCTATCAGTTTGTGCAGACGCACAAAAAGTCGACCGAGCAAAGTTAGCTCAGACAGAATTTAGTATTATTGAATTTGATCCGGAGACGTTTCGAGTCCTATTGGATTACCTACACACGGGAACGTGTCCACTGACGTGTGTTTCAATACCAGGTCTCCTTTGTGCTGCTGAACATTATGACCTCCCTGAATTACTTCAAGCCTGCTTCCATCATTGTAAACAATTTCTGCGTATCGAAGTTGTGTGCCCCATGCTCATCTCATTAGAAAACTACTACTGGCGTTATACTTCGGCCTCCGAATTAGTCAATATGATTCTCACATTTGTGGAAAACAAAGCACACGCCCTCTTTCGTCAGTCTGATTATTTAAACCTATCTGAATCAATGGTACAGATGATCATGTGCCGAGATCTCCAGACACCAGAAATTCGTAAATTCGAAGCCATGCTAGCCTGGGCCCAGAGCAAAGTTGACAAAATGAAAATGTTACCGAACAAAGATACACAATTTGAATTCGAGTGCATTATGGAAAGACTAACGAGAGACTTAAATCTATGTCGAATTTCTCCAAGTGAACTACTAACTGTTGTGCTGCCATCAAAATCACTTAAGAACGAACGAATCATGGAAACCTTGATGATTCAAGTCAATCTTGGCACATACCGTATGCAAGAGCTGGACGAATACAGAAACCAATTAAGAAGCCAAGACTCAAAGTGTAGCGAAGGAAGTGTGACGGTTTATAGAGGTGGATGA
Protein Sequence
MIPNLEAAHNTVTLSECREPSPLYDNNHYHEECLRCNSCGLNLTGPNQKRARRFKNHILCDLHFADVALMECSDFMQQLRSFKPQSLGCAVARRKSSTTLIFPLPPQACSDEFCEEYPHNLMPTPGYWIECSRQKISLPNQNSLWDESDSEHEDIRVGSSSDAYLERECSDLYEDDEDSEATPSPRKKTTIEEQWDQQGAFELISVEQETYEKYFFGTEHWNYFTSDEDLGPVILSIKQETLNGRDQFRILVRAGSYTVHGLIPASCVFADRYNREEVVRSLGKEVNLNPPLTLGQLPDTPEELLKLDQVFIKSELKVGVIFVKEDQYSEEQILDNNENSSLFEEFLQLLGDRCRLRGFDKYKGGLDTVHDLTGLYSVYTNWRNIEIMFHVSTLLPYEKHDPQKLQRKRHIGNDIVCVVFLEADNTRFSPACIKSHFLHTFILVRVSARIKHKPTRYEVSVVTRDEVGAYKPYLWEQSVFEKGPMFREWLLTKIVNGERASYSAPKFARMQERTRSQMLEDLVMNLSNHAETGQIPKPYRRGSWRPIGHMRPSSPLLDSVRDQFEDYDQLAKDFTRVFLNEEPLCLQNAHLFDVVFLVGQSKQKARFIGVRAILGVRSRVFQEMLYGIQTGFGSPQIPVAEIFARPAPSLVSPQNQKPKSNNYLTVPDIESARPKSVPSSPMVKRAFSRLGTITAGWGRSIRNKNTQLNPEDKKKWISSQDCSNRESKDKDGKDKPGNNQLAVPRLSVCADAQKVDRAKLAQTEFSIIEFDPETFRVLLDYLHTGTCPLTCVSIPGLLCAAEHYDLPELLQACFHHCKQFLRIEVVCPMLISLENYYWRYTSASELVNMILTFVENKAHALFRQSDYLNLSESMVQMIMCRDLQTPEIRKFEAMLAWAQSKVDKMKMLPNKDTQFEFECIMERLTRDLNLCRISPSELLTVVLPSKSLKNERIMETLMIQVNLGTYRMQELDEYRNQLRSQDSKCSEGSVTVYRGG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00694841;
90% Identity
iTF_00693986; iTF_00991943; iTF_00427441; iTF_01396690; iTF_00688819; iTF_00335229; iTF_00974911; iTF_00426528; iTF_00188356; iTF_00336900; iTF_01358145; iTF_00476738; iTF_00538338; iTF_00579394; iTF_00615010; iTF_01551106; iTF_00494499; iTF_00526691; iTF_00534691; iTF_00617763; iTF_00804515; iTF_00491620; iTF_00512836; iTF_00803716; iTF_00507717; iTF_01055365; iTF_00509926; iTF_00572710; iTF_00508455; iTF_01548967; iTF_01557671; iTF_00351976; iTF_00508456; iTF_01045609; iTF_01553353; iTF_00480970; iTF_00519274; iTF_01195402; iTF_00490189; iTF_00590349; iTF_00603469; iTF_00891117; iTF_01556941; iTF_00565486; iTF_00580878; iTF_00558031; iTF_00584527; iTF_00251473; iTF_00486673; iTF_00551697; iTF_00589649; iTF_00559602; iTF_00604210; iTF_00503379; iTF_00901619; iTF_00506228; iTF_00892021; iTF_00573433; iTF_00516378; iTF_01319162; iTF_00582363; iTF_00583803; iTF_00549660; iTF_00586076; iTF_01555516; iTF_00190077; iTF_00832285; iTF_00523806; iTF_00504095; iTF_00569087; iTF_00475328; iTF_00569793; iTF_00716865; iTF_01374209; iTF_00371203; iTF_01138180; iTF_00816681; iTF_00259024; iTF_00259892; iTF_00583074; iTF_00476035; iTF_01563044; iTF_01563916; iTF_00513573; iTF_00611461; iTF_00474621; iTF_01315621; iTF_01397634; iTF_01398659; iTF_01074633; iTF_00200010; iTF_00655435; iTF_01109458; iTF_01313938; iTF_01314803; iTF_00899765; iTF_00760249; iTF_00900761; iTF_00742042; iTF_01201756; iTF_01376765; iTF_00975743; iTF_01175263; iTF_01558405; iTF_00488774; iTF_01328006; iTF_00470983; iTF_00564039; iTF_00576455; iTF_00591081; iTF_01162377; iTF_00524522; iTF_00547466; iTF_01325034; iTF_00557313; iTF_00574177; iTF_01326530; iTF_01320579; iTF_00495240; iTF_00610024; iTF_00619976; iTF_00496745; iTF_00570505; iTF_00481645; iTF_00485968; iTF_01323505; iTF_00514290; iTF_00577170; iTF_01552562; iTF_01325779; iTF_00522325; iTF_00497526; iTF_00498264; iTF_00518552; iTF_00560409; iTF_00607194; iTF_00558844; iTF_00553149; iTF_00482366; iTF_01324255; iTF_00478125; iTF_00548941; iTF_00580877; iTF_01550381; iTF_00593230; iTF_00499695; iTF_00596047; iTF_00359569; iTF_00550354; iTF_00615672; iTF_00477439; iTF_00512116; iTF_00537620; iTF_00435765; iTF_00536885; iTF_00478838; iTF_00566198; iTF_00580082; iTF_01174392; iTF_00509209; iTF_00515705; iTF_00542553; iTF_01554073; iTF_00595354; iTF_00605690; iTF_01321306; iTF_00593947; iTF_00612923; iTF_00614299; iTF_00520741; iTF_01559867; iTF_00501916; iTF_00561148; iTF_00539069; iTF_00488125; iTF_00806078; iTF_00473919; iTF_00564767; iTF_01551839; iTF_01470661; iTF_00487411; iTF_01196108; iTF_00598986; iTF_00617013; iTF_00671693; iTF_00797903; iTF_00313650; iTF_00315348; iTF_00624887; iTF_00694841; iTF_00531770; iTF_00671066; iTF_00604960;
80% Identity
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