Lobt027425.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leucophora obtusa
Gene Symbol
ftz-f1
Assembly
GCA_949987735.1
Location
OX465296.1:184393548-184396640[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.28 6e+03 -1.9 0.9 97 98 65 75 8 199 0.44
2 4 3 6.4e+04 -9.0 18.9 59 164 249 359 232 380 0.52
3 4 3 6.4e+04 -5.6 15.1 36 162 363 486 354 523 0.59
4 4 1.3e-91 2.7e-87 295.7 0.2 1 408 624 1028 624 1030 0.86

Sequence Information

Coding Sequence
ATGGAAGAATTTTCAATGTCCCTTTTGGCTGATAATACTTATAGTAATACCACAAACAACAATATTATTAACAATAATAACATGAGCAACAATAATACCAATATGCATCATCACAAAGATGATATGCTAGCAGCCAATACAGCAGCCTGCATGTATGAAACGCAAAAATCAGAAATGTCAAAGGCCAAAAGTGGATATAGTACATTTACAACATGTGCACAAAAATCGGACATACTAGATCATCATACAGACATAGATGCTAATTTAGATGCTGGAGTATCATTGGGTGCTTTATGTGATTTAAAATTTTCGGAAGCAGGTGGACCGATAGGTGCTACATTGGTGAATGAAACAACGCAAACTTCAAACTATAAAGTTTTACCACCTTTAATGGCTGGTACAGAGGCTAATCAGATAATGACGGGTTTACAAAAAGTGAATGCTACAACACCGAGATGTATAAATGTACCCACATTTTCTAATATGTTATTTACCAGAGATGATATACAACAATCCTCAACAACAGCAACATCACAACAGCATTATTTAGCACTAAAAGGCAATGAAGTAAAAAATACTGCCGAATCAATACAACAACATTTTATAACAAATACTGAAATTGCCACTACAACAACAGAAATGTCACCACCTAATGAATTTGCAGGAAGAGGTATGAATGCAAGTGGTAGAAGTGTAGAAGgaaattttagaaataatttaTTAGAGTATGGTATTGCATCCTCATCCTCCTCAGCAAGCCATAATTTGAATAACTATTCAGAGAGTTCGACAAATCATAATGGTTTGGATGTTAATATCAATAATAGAGCTACTAATGAAAACCATATAAGTACCACCACTGTAACAACAATTGCTGCTACTACACCAACAACAAATGTTACGAATCAAACTGCCAACAATACCCCCAATCAGTCACAACATCAGCAGCAACAACATGCAACAACTTCTAGTACAAGAACAACTTTACACAGTATTGAAGAATTAGCGGCTAGTTCCTGTACACCAACATCATCTACCACCTCCTCGATTAATACTTTTGTCAATAACAATAATGCTTCTTCTTCAACGGCTACATCAATACctttaaataatattaataatgCAAATGATGTACAACAACATGACCATTCTCAAGATAATATGCCAAATTCTTCCAATAATCCACAACAACAATATGTAATTCATCAGCAGCAATTACACCAGCAACAACATCACCGTCAGCAATTCCAACATCAACAACATCTTCTTAATTCATCTAGCATTAGCAGTGACAGTAATGAATCCATTTCTTCTTCTGATGAATTAATTGATATGGAATTAAATGAAAGTTCGGGTTATCGGGATACCACCTCCTCGCATTCACAACATATTACTAATGGCGGCAGGACCGGCAATAATCCTTCATCCAATCAACAACTATCCTCAAATCCCTCGGGCGATTCATTGATCAATACTTTCAGCAATAATGGTGGCCTTTCGGCCTCTTCAGCCTCGGGTACCTATATGTCCGTGTTGCCACCCAATGTTGGCGCCACCACCAGTTCATCGGCTGCTTATTTGGGAGGTGTTATTAACCATTTTGGTGGTGGTACTCATTCCGGTCCTGATGTTATAGATATCAAGCATCTGTTCGAGGAACTGTGTCCTGTGTGTGGTGATAAAGTTAGTGGCTATCATTATGGCCTGCTGACATGTGAATCCTGTAAAGGTTTCTTCAAGCGTACGGTACAAAATAAGAAAGTGTACACCTGTGTCGCCGAACGTTCGTGTCATATTGATAAGACACAGCGGAAACGTTGTCCATATTGTCGTTTTCGGAAATGTTTGGAAGTTGGCATGAAAATAGAAGCTGTGAGAGCCGATAGAATGCGTGGTGGTAGAAATAAATTTGGACCCATGTACAAAAGAGATCGAGCGAGAAAATTACAAGCAGTGAGACAACGACAAATAGCATTGCAGGCCTTACGAACGTCTGTGGGTACAGGACATATGAAGGCAACATCTCTATCAACCGGTTATCAACAGGCATATATAAATAGGAATATAAAACAAGAAATACAAATACCTCAGGTATCCTCTCTAACAAAATCACCCGACTCTTCACCCAGCGCCATGACTATTGCTTTAGGTCAGGTTAATACCAGCTCTGGTGTGATAGCAACACCTTTGCAAGGCAGTAATGGTGCTAGTGGTAATAGtgttaataataataatagtaGCAATAGAAGTGATGGCCTAAACCATATTGGTGGTGGCAGTGGTAATTTTCATGAAACTGGCACAGGATCCTTACAAAGTGTCAGAGATTCAAAACTATGCACACATCCTTCAAGTACTGCCAATTCCATAATAGAACCCTTAACAGTATCACCGATAATCAGGGATTTTGTACAGTCAATTGATGACAGAGAATGGCAGACGCAGTTATTTGCTCTGTTACAAAAACAAACGTACAATCAAGTTGAAGTGGATCTGTTTGAGTTAATGTGTAAAGTTTTAGATCAAAATCTTTTCTCACAAGTCGATTGGGCACGTAATACTgtattttttaaagatttgaAGGTTGATGATCAAATGAAACTACTACAACATTCATGGTCCGATATGTTAATATTGGATCACCTACATCAACATATACACAATGGCCTGCCCGATGAAACACAGCTGAATAATGGGCAAGTCTTCAATTTACTAAGTTTAGGTTTATTGGGCGTACCACAGTTGTCTGATTATTTCAATGAATTGCAAAACAAATTACAAGATTTGAAATTTGATATGGGCGACTATGTGTGTATGAAATTCCTGATTTTATTAAATCCAGATATACGAGGTATTATCAACAAGAAAGCTGTAATATTGGGTCAGGAAAATGTACAAGCAGCGTTATTAGATTATACGCTAACGTGTTATCCATCTGTGATGGATAAATTTAGGAGGCTGTTAAGCATACTGCCGGAAATACATGCAATGGCATCGCGTGGTGAAGAGCACTTATATTCAAAACACTGTGTCGGAAGTGCACCCACACAAACGTTACTCATGGAAATGTTGCATGCAAAACGAAAGGTGTAA
Protein Sequence
MEEFSMSLLADNTYSNTTNNNIINNNNMSNNNTNMHHHKDDMLAANTAACMYETQKSEMSKAKSGYSTFTTCAQKSDILDHHTDIDANLDAGVSLGALCDLKFSEAGGPIGATLVNETTQTSNYKVLPPLMAGTEANQIMTGLQKVNATTPRCINVPTFSNMLFTRDDIQQSSTTATSQQHYLALKGNEVKNTAESIQQHFITNTEIATTTTEMSPPNEFAGRGMNASGRSVEGNFRNNLLEYGIASSSSSASHNLNNYSESSTNHNGLDVNINNRATNENHISTTTVTTIAATTPTTNVTNQTANNTPNQSQHQQQQHATTSSTRTTLHSIEELAASSCTPTSSTTSSINTFVNNNNASSSTATSIPLNNINNANDVQQHDHSQDNMPNSSNNPQQQYVIHQQQLHQQQHHRQQFQHQQHLLNSSSISSDSNESISSSDELIDMELNESSGYRDTTSSHSQHITNGGRTGNNPSSNQQLSSNPSGDSLINTFSNNGGLSASSASGTYMSVLPPNVGATTSSSAAYLGGVINHFGGGTHSGPDVIDIKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFRKCLEVGMKIEAVRADRMRGGRNKFGPMYKRDRARKLQAVRQRQIALQALRTSVGTGHMKATSLSTGYQQAYINRNIKQEIQIPQVSSLTKSPDSSPSAMTIALGQVNTSSGVIATPLQGSNGASGNSVNNNNSSNRSDGLNHIGGGSGNFHETGTGSLQSVRDSKLCTHPSSTANSIIEPLTVSPIIRDFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLILDHLHQHIHNGLPDETQLNNGQVFNLLSLGLLGVPQLSDYFNELQNKLQDLKFDMGDYVCMKFLILLNPDIRGIINKKAVILGQENVQAALLDYTLTCYPSVMDKFRRLLSILPEIHAMASRGEEHLYSKHCVGSAPTQTLLMEMLHAKRKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00892825;
90% Identity
iTF_00892825;
80% Identity
iTF_00892825;