Lobt017347.1
Basic Information
- Insect
- Leucophora obtusa
- Gene Symbol
- Rel
- Assembly
- GCA_949987735.1
- Location
- OX465295.1:339058994-339065834[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.3 4.8e+04 -4.1 0.1 13 29 22 37 18 41 0.68 2 3 5.9e-51 5.4e-47 161.7 0.4 1 168 151 333 151 334 0.93 3 3 0.69 6.3e+03 -1.2 0.0 83 104 952 974 916 1003 0.71
Sequence Information
- Coding Sequence
- atGTTGCCACATTATTTTCCTAATCGACATGGCAAGGATATTGTTGATATGGATACGCAAGAACGAATACGATACATGAGTGAATCGTCAATGTCTGGCACCAGTGGCTATAACACAACATCTCCAGGACCAGGTAATTCTCCAAGTTCAGTTGGTTATTCTCCAGTACAATCTCCTGCTTCTGCATTACAAGCTGATTTTTCCAACTTAACTTTACCACCAGCTACTTCAATATCTTTTCAACAACAAAATTCGGCACAATATGTACAATTGCAATCTGTACAAATGAACACAAATACATTACAACAGCAGCAGCAGACAATTGTTTCAACAATGTATCCAAATCAGAATAATAATTTAACAGTTcagtataattttggtaatCCACTAAATTATCAACAACAATCAATACATCAGCCCGCTTTTATTAAACATGAATATCCTGCTACCTTGCGCATCAACGAACAGCCAGTGGAAAAATTTCGTTTTCGCTACAAATCTGAAATGCATGGCACACACGGTTCTCTTAATGGTACCAATTCACAAAGAAACACAAAAAGTTTTCCAGAAGTGGAATTGTGTAATTACAAAGGTCCTGCTATTATACGCTGCAGTCTTTTTCAGACTAATCTAGATAGTCCACATTCCCATCAGTTGGTGGTACGCAAAGATGATCATGATATATGTGATCCCCATGAGATACAAGTAGGCCAGGAAGTTGGCTATTTTgcagaatttaaaaatatggGTATTATACATACGGccaaaaaatttattgttgCTGAATTACTTAAAAAGAAACTTAAACGTTTGCTATTCGAATTGGGTCGTGATACTTTGACCAAGAAAGAGGAACAAGAGTTACATAAACAAACAGAAAAAGAAGCCAAGGATATGAATTTAAACCAGGTTCGCTTATGTTTTGAAGCTTTTCGCGTTGAAGACAACAACTTTTATACACCAATTGCTGCACCCATCTATTCCAACCCCATTAACAATCGAAAATCAGCACAAACTGGAGAATTACGTATAACACGTTTAAGTATTGCTACCGGCAGTGTTTCTGGCGGAGAAGATCTTATTCTGTTGGTAGAAAAAGtgagtaaaaaaaatatcaaagtACGTTTCTTTGAAATGAATGATGATGAACTTGTATGGGAGTCATTTGCTACATTTCGTGAATCTGATGTCCATCATCAATATGCCATTGTATGTAGAACACCGGCATACAAAGATAAAGATATCGACAAACCAGTAGAGGTATTTATAGAACTAGTTCGACCCTCAGATGATGAACGTAGTTATCCAGCAGTATCATTTCGTTATAAACCTAGTTATGCTGTTATATCACGAAAGCGTAGAAGGACATGTTCTTCGGTTTCCGGTAGTTCTAGTAGTATTAATTCGGGATCTTTAAGTTCTGGAGACATACCAAAAACCGTACAAGAACAGCAATTGTCAGGCTTAAACTATTCCAGGATTGTCTCGGAAGAAATCAATCGTTTAATGGCTGATCCTGAAATAAAGCACAAATCGACAAGTTTTTCTTCTGGCATTGATCATTTATTAGATTACTTGGGtaatgaaaatgaaaatttaatgGCCCTAGACGATAATAACGAAAATCTTAATAGTCCAGCTGTCGATCTAGGCGGCGGAGGTCATACAGAAAAAGATGGAGCGTGTAATACTAATAGCACCAAATCTTTAttacattacaaaaaagtaatgATTAGTAAAAAGTTAATGGATACAGCGACTAAACCAAGCGAACAAAATCTTCAATCACAAACTCAGTTTCCTCTCAGTCCTTATATACAAcgtattttaaatatattttccgATACCAGATCGGCCCAACCACTTAATTCTACTAAATTAACATGTGCTGCTGagcaaataataaaaatatttaatgaacATGCAGAAAAACATGAAGAATCTTTAATTCATGATCTTGTCTTTAATGATAATAATAAATTGGCCATACCAATATTTAAGatattagaattttttaaattgaataatCTTTTAAATTCAAACTTAACTAAACGTAATCAGTCTTCTTTGCATTTTGCCTGTCTTTATGATCGTTCTCTATATGTACGACCCTTATTGAAGTTGGGATGTAACCCTAATATTCAGGACATTAAAGGTGATACTGCACTACACATTGCGGTACGTGAAAACCATTTGCAGTGCTTGGAAAGTTTCATCAATTCTCAAATGATTTTAAAgttgaatattttaaattatgaTGGCTTTACACCATTACATTTGGCAATACGAGATAATAATTATGAAATGGCCtcaaaacttttaaaatatgATGCAACTATAGCAGCTGTAGCAAATAGTAAAGATGGTAATAACGCCTTACATATGGtaatacaacaacaaaatattaaattggTAAAATTAATATTGGATAACCCTACCATAGCTTCAGTAATAAATGCTCAGAATACAGCAGGATATACTCCATTAGATTTGGCAAAACAATTTGCATCGACAAGTAAACAAGCTCAAGCAATTTTATCATTACttttaaaaaaccaaaatttaaCATCTCTTTCTTTGCCTTCAATCGATAATCAAAGACTCTCAGTGGATGATGATGGTAAACTCATTataaaagaagaagaaaacTCTTGTTCCTCCACCgaagatgatgatgatgatgatgatggcGGTGGTGGTAGTAGTAGTAGTTTGGAACCAATGGTTACTATTCCCCCAAATTCTATAGTAGACGAAATTGAAATTAAACAAGAAAAATTCGGAGATCATTTTGATTTATCTGATTTAGTGGCGGCTTTTAATAATAAAGATATTTTTGAAACATTATGCAAGCAGTTGGATAAACAGGATAAATGGAAAATAGTTGCTGATAAATTAGGTATAAAATGTGTGTATTTGGATGATGCCAAGGGTTTATTAATTATGATTAAACGTAATATTCAAACCATTAATTGTACATTATTTGCATTAGCATTAGAAGATGttgacaaaaatttaattgatttgattaaaaaacattaa
- Protein Sequence
- MLPHYFPNRHGKDIVDMDTQERIRYMSESSMSGTSGYNTTSPGPGNSPSSVGYSPVQSPASALQADFSNLTLPPATSISFQQQNSAQYVQLQSVQMNTNTLQQQQQTIVSTMYPNQNNNLTVQYNFGNPLNYQQQSIHQPAFIKHEYPATLRINEQPVEKFRFRYKSEMHGTHGSLNGTNSQRNTKSFPEVELCNYKGPAIIRCSLFQTNLDSPHSHQLVVRKDDHDICDPHEIQVGQEVGYFAEFKNMGIIHTAKKFIVAELLKKKLKRLLFELGRDTLTKKEEQELHKQTEKEAKDMNLNQVRLCFEAFRVEDNNFYTPIAAPIYSNPINNRKSAQTGELRITRLSIATGSVSGGEDLILLVEKVSKKNIKVRFFEMNDDELVWESFATFRESDVHHQYAIVCRTPAYKDKDIDKPVEVFIELVRPSDDERSYPAVSFRYKPSYAVISRKRRRTCSSVSGSSSSINSGSLSSGDIPKTVQEQQLSGLNYSRIVSEEINRLMADPEIKHKSTSFSSGIDHLLDYLGNENENLMALDDNNENLNSPAVDLGGGGHTEKDGACNTNSTKSLLHYKKVMISKKLMDTATKPSEQNLQSQTQFPLSPYIQRILNIFSDTRSAQPLNSTKLTCAAEQIIKIFNEHAEKHEESLIHDLVFNDNNKLAIPIFKILEFFKLNNLLNSNLTKRNQSSLHFACLYDRSLYVRPLLKLGCNPNIQDIKGDTALHIAVRENHLQCLESFINSQMILKLNILNYDGFTPLHLAIRDNNYEMASKLLKYDATIAAVANSKDGNNALHMVIQQQNIKLVKLILDNPTIASVINAQNTAGYTPLDLAKQFASTSKQAQAILSLLLKNQNLTSLSLPSIDNQRLSVDDDGKLIIKEEENSCSSTEDDDDDDDGGGGSSSSLEPMVTIPPNSIVDEIEIKQEKFGDHFDLSDLVAAFNNKDIFETLCKQLDKQDKWKIVADKLGIKCVYLDDAKGLLIMIKRNIQTINCTLFALALEDVDKNLIDLIKKH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00716404;
- 90% Identity
- -
- 80% Identity
- -