Lobt018088.1
Basic Information
- Insect
- Leucophora obtusa
- Gene Symbol
- dl_2
- Assembly
- GCA_949987735.1
- Location
- OX465295.1:359630612-359632633[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.93 8.5e+03 -1.7 0.8 110 140 36 66 21 67 0.64 2 2 4.9e-74 4.4e-70 236.8 0.1 1 169 71 241 71 241 0.99
Sequence Information
- Coding Sequence
- atgtaCCAAAATTCTACCAATAATAACGTCTTAGCTGCGGGAGGCGGTGGAGGAGTCGGTGGTGTTACAGTCAGTAATCAGAACGCTCAAATTATGGATCCCAatcatcaacaacaacaacagcaaaatattaattataatgGAATGCAATCACAACAGCAGCAACAGCATCAGCcaacaaataataaaattgtacGAGAAAAGCCCTACGTAAAAATAACAGAACAACCTGCCGGTAAGGCGTTAAGGTTTCGTTATGAATGTGAAGGTCGTTCGGCCGGTTCCATACCCGGTGTTAGTTCAACACCTGAAAACAAAACATATCCCACTATTGAAATTGTAGGCTACAAAGGACGTGCCGTTGTTGTTGTATCGTGCGTTACCAAAGATCAACCATATAGACCTCATCCTCATAATCTGGTCGGAAAAGAGGGTTGTAAAAAGGGCGTATGTACCCTGGATATTAATTCCGAAACAATGAAGGCTGTGTTCAGCAATTTGGGCATACAATGTGTTAAAAAAAGGGACATTGAAACAGCACTCAAAGCACGAGAAGAAATACGTGTGGATCCATATAAAACTGGATTTTCGCATAGATTTCAACCCTCTAGTATTGATTTAAATGCAGTTAGGTTGTGTTTTCAAGTGTTCATGGAAAGCGAACAGAAGGGTCGCTTTACACAGCCCTTACCACCGGTGGTCTCAGAACCGATATTCGACAAGAAGGCCATGTCAGACCTGGTCATCTGTCGCCTGTGCTGTTGTTCCGCCAGTGTGCTGGGCAACACGCAAATTATATTATTGTGTGAAAAAGTATCGAAAGAAGATATTGCAGTGCGCTTTTACGAGGAGAATAACGGTCAAACTATCTGGGAGGCTCTAGGAGAATTTCAGCATAGCGATGTACATAAACAGACTGCCATATCATTTAAAACGCCGCGATATCGAAAAACAGATATAACTGAACCTGCAAAGGTATTTATTCAGCTTAAACGACCGTCGGACGGTATTACGAGTGAACCACTTCCGTTTGAATATGTGCCATGTGATTCAGATCCCGCCCATTTGAGACGTAAACGTCAAAAAACTAACGGTGATCCTGCACACATGTTATTGCAACAAGAACAACAGCAAAATCAAAACCAAAATGGTCACCAAGACGGTCGTCAAGGAAATATGGCTTGCTGGAATACTCCTAACTTACCTGCGATTAAAACGGAACCAAGAGTTACTTCACCACAACCCTTTGGAATGTATCGTGCTCCACCAGAATTAACTCCATCGCCGCAACCACTGTCACCTTCCAATGCATATACTCACATTACACCATCGCCATATAGTATAGCAACGAGAGCAGCACCAGCACAGGGCAATCAGCAATTGATATCATCCAACCAACAGTACAATACACCCAGTACTGTTACTGATGGCGGCAATCCAAACGCCCAACCTCCAATGGATATTAGTGCATACAATGCGTTTGGACAACAGCCGCAGCAATATAATGTCAATAATTTTGGGGGCGCAGGCGAAACCCTTTGGGAGAGTAAATTTGATCCAACGGCAACTGCTAACAGTAACAATATGCGTAATCTCAATAACGCAAATACATTTACAATGCATAATCTATTGACACCGGCCAGTGCTTGTGGAGGGCCTGGAAATAGTACAAATACAACAGGAGGAGGTGGTGGATGGAATTTAACACCTAATCATTTTCATTCTCATCAACATCACagacaacaacaacaacaactcCAACAGCAGCAACCTCAATATCAACAACATCAAGCACCAAATAATCCTATGGTAACTAATAATAATGGTGGTGCTGGAATAGCGAATGCGGTTGCGTCTAACAACAATGCCAATAACGCTAACAACAATAACACTGAACATGGTCTCAGCAATCTTCTTACTTTTGACAGCGACCAATTAGTTCGAATCAATTCCGAGGATCAACAAATGTTACGACTTAATACCGAAGACCTTCAAATATCAAGTCTATCCATATCATCATAG
- Protein Sequence
- MYQNSTNNNVLAAGGGGGVGGVTVSNQNAQIMDPNHQQQQQQNINYNGMQSQQQQQHQPTNNKIVREKPYVKITEQPAGKALRFRYECEGRSAGSIPGVSSTPENKTYPTIEIVGYKGRAVVVVSCVTKDQPYRPHPHNLVGKEGCKKGVCTLDINSETMKAVFSNLGIQCVKKRDIETALKAREEIRVDPYKTGFSHRFQPSSIDLNAVRLCFQVFMESEQKGRFTQPLPPVVSEPIFDKKAMSDLVICRLCCCSASVLGNTQIILLCEKVSKEDIAVRFYEENNGQTIWEALGEFQHSDVHKQTAISFKTPRYRKTDITEPAKVFIQLKRPSDGITSEPLPFEYVPCDSDPAHLRRKRQKTNGDPAHMLLQQEQQQNQNQNGHQDGRQGNMACWNTPNLPAIKTEPRVTSPQPFGMYRAPPELTPSPQPLSPSNAYTHITPSPYSIATRAAPAQGNQQLISSNQQYNTPSTVTDGGNPNAQPPMDISAYNAFGQQPQQYNVNNFGGAGETLWESKFDPTATANSNNMRNLNNANTFTMHNLLTPASACGGPGNSTNTTGGGGGWNLTPNHFHSHQHHRQQQQQLQQQQPQYQQHQAPNNPMVTNNNGGAGIANAVASNNNANNANNNNTEHGLSNLLTFDSDQLVRINSEDQQMLRLNTEDLQISSLSISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -