Lobt034829.1
Basic Information
- Insect
- Leucophora obtusa
- Gene Symbol
- Bgb
- Assembly
- GCA_949987735.1
- Location
- OX465297.1:95355426-95361966[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-12 1.6e-08 36.1 0.0 114 159 13 58 5 65 0.93 2 2 1.3e-30 1.6e-26 94.7 0.1 1 90 75 160 75 162 0.88
Sequence Information
- Coding Sequence
- ATGGCACCAAACATGGTTGGCCGCTGTTATCAATCGGATTTGGAACGTCTTGATGGTGTTGGTTGTTTGAAGTATGACGCACCTAGAGCTAAACAACAAGATTTCATACTGCGGCACCAAATTAACCTATATAATCAAAAATTATGTGAGTTTGAAGACTCCAAGCAAGCGCTTGGCACCACTGGACTATATGAACAACCTAAACCAGAATTTGACTTCAAGATGGCTCTTGTTGTTCCATATCAAAAGATGAAATTCGAGAGAAATGAACTTTTTCGTAGTTTGAGCCAGGAAAGCGAAATACGCTACACAGGATATCTGGAAGGAGCAATAGAAGAACGACAGATACGTTTCGAAAATGACTGCCGAGAAGGTCAAATAGAAATCTCATTCGTTGGCTCAGGCACAAATTTGCTATTAAGTTTTAATGCCTATCGGAATCCTTATTTGTACCACAAAGACTACGAGTTTGGAAAAGAACTGGGATAG
- Protein Sequence
- MAPNMVGRCYQSDLERLDGVGCLKYDAPRAKQQDFILRHQINLYNQKLCEFEDSKQALGTTGLYEQPKPEFDFKMALVVPYQKMKFERNELFRSLSQESEIRYTGYLEGAIEERQIRFENDCREGQIEISFVGSGTNLLLSFNAYRNPYLYHKDYEFGKELG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -