Lobt034827.1
Basic Information
- Insect
- Leucophora obtusa
- Gene Symbol
- Bgb
- Assembly
- GCA_949987735.1
- Location
- OX465297.1:95333804-95335444[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.9e-60 5e-56 190.7 0.3 1 161 29 185 29 191 0.95 2 3 5.6e-59 7.1e-55 187.0 0.0 1 161 200 356 200 362 0.95 3 3 1.2e-58 1.5e-54 185.9 0.0 1 162 371 528 371 533 0.95
Sequence Information
- Coding Sequence
- ATGAACCAAGCTGACTTTGATCGTATGATAGCGCTTGGCACCCCTGGACTATATGAACAACCTAAACCAGGATTTGACTTCAAGATGGCTCGTGTTGTTCCCAATCAAGAGATGAAATTTGAGAGTGATGAACTTTTTCGTAGTTTGAGCCAGGAAAGCGAAATACGCTACACAGGATATCTGGAAGGAGCAATAGAAGAACGACGGATACGTTTCGAAAATGAGTGCGGAGAAGGTCAAATAGAAATCTCCTTCGTTGGCTCAGGCACAAACTTGCTATTAAGGTTTAATGCCTATCGGAATCCTTATTTGTACAACAGAAACTACGAGTTTGGAAAAGGACTGGGAGAGGTTCACATCAAGTCCTATTTTATATTGTACGGTGTGTGCGTTCAATTTCGTGGTTGGTTAGATTTGGAACGTCTTAATGGTGTTGGTTGTTTGGAGTATGACGCCCCTAGAGCTAAACAACAAGATTTCATACTGCGGCGTCAAATTAACCAATATAATCAAAGATTATGTGAGTTTGAAGACTCCAAGCAAGCGCTTGGCACCACTGAACTATATCAACAACCTAAACCAGGATTTGACTTCAAGATGCCTCTTGTTGTTCCAAATCAAAAGTTGAAATTTGAGAGTGATGAACTTTTTCGTAGTTTGAGCCAGGAAAGCAAAATACGCTACACAGGATATCTGGAAGGAGCAATAGAAGAACGACGGATACGTTTCGAAAATGACTGCGGAGAAGGTCAAATAGAAATCTCATTCGTTGGCTCAGGCACAAACTTGCTATTAAGGTTTAATGCCTATCGGAATCCTTATTTGTACCACAGAAACTACGAGTTTGGAAAAGGACTGGGAGAGGTTCACATCAAGTCCTATTTTATATTGTACGGTGTGTGCGTTCAATTTCGTGGTTGGTTAGATTTGGAACGTCTTGATGGTGTTGGTTATTTGGAGTATGACGCCCCTAGAGCTAAACAACAAGATTTCATACTGCGGCGTCAAATTAACCAATATAATCAAAGATTATGTGAGTTTGAAGACTCCAAGCAAGCGCTTGGCACCACTGAACTATATCAACAACCTAAACCAGGATTTGACTTCAAGATGCCTCTTGTTGTTCCAAATCAAAAGTTGAAATTTGAGAGTGATGAACTTTTTCGTAGTTTGAGCCAGGAAAGCGAAATACGCTACACAGGATATCTGAAAGGAGCAATAGAAGAACGACAGTTACGTTTCGAAAATGACTGTGCAGAAGGTCAAATAGAAATCTCCTTCGTTGGCTCAGGCATAAACTTGCTATTAAGGTTTAATGCCTATCGGAATCCTTATTTGTACCACAGAGACTACGAGTTTGGAAAAGGACTGGGAGAGGTTCACATCAAGTCCTATTTTATATTGTACGGTGTGTGCGTTCAATTTCGTGGTTGGTTAGATTTGGAACGTCTTAATGGTGTTGGTTGTTTGGAGTATGACGCCCCTAGAGCTAAACAACAAGATTCATTACTGCGGCATCAAATTAATCTATATAATCAAAGATTACTTGCGTTTGAAGACTCCAAGCAAGCTCATAGCGGAAATAGACCCGAAGATATGGATGCTGCAGGGGCGGAGTTCGGTGACTTCAAGAAGCGTTGA
- Protein Sequence
- MNQADFDRMIALGTPGLYEQPKPGFDFKMARVVPNQEMKFESDELFRSLSQESEIRYTGYLEGAIEERRIRFENECGEGQIEISFVGSGTNLLLRFNAYRNPYLYNRNYEFGKGLGEVHIKSYFILYGVCVQFRGWLDLERLNGVGCLEYDAPRAKQQDFILRRQINQYNQRLCEFEDSKQALGTTELYQQPKPGFDFKMPLVVPNQKLKFESDELFRSLSQESKIRYTGYLEGAIEERRIRFENDCGEGQIEISFVGSGTNLLLRFNAYRNPYLYHRNYEFGKGLGEVHIKSYFILYGVCVQFRGWLDLERLDGVGYLEYDAPRAKQQDFILRRQINQYNQRLCEFEDSKQALGTTELYQQPKPGFDFKMPLVVPNQKLKFESDELFRSLSQESEIRYTGYLKGAIEERQLRFENDCAEGQIEISFVGSGINLLLRFNAYRNPYLYHRDYEFGKGLGEVHIKSYFILYGVCVQFRGWLDLERLNGVGCLEYDAPRAKQQDSLLRHQINLYNQRLLAFEDSKQAHSGNRPEDMDAAGAEFGDFKKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -