Lvar011345.1
Basic Information
- Insect
- Leucophenga varia
- Gene Symbol
- Rel
- Assembly
- GCA_018903435.1
- Location
- JAEIFJ010002248.1:181097-184314[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.6 1e+04 -3.3 0.1 10 31 10 30 9 36 0.73 2 4 0.8 3.1e+03 -1.7 0.1 88 108 128 148 110 157 0.73 3 4 8.5e-51 3.3e-47 161.0 0.6 1 168 181 363 181 364 0.95 4 4 1.1 4.1e+03 -2.1 0.1 68 122 684 742 675 759 0.65
Sequence Information
- Coding Sequence
- ATGATATCAGAATTCTATGATATGGACAAAGGCGAAAAGATACGCTACGTCAGCGAATCATCAAATGCAAGCACAAGTGGTTATTCAACTGCCGGACAGACGACACTTGGAAATAATTCACCATCATCACAATTTTCATTGTCCCCCGCGCCATCACCAGTAACGGCGACACTGCAAACAGAATTTTCTAACCTCAATTTACCATCATCGTCAAATTCACCAAACCAACAACAACTACATAATTCCCCACACCGCTATGTACAATTACAAACAGCTGTTGGCGGCGGAGGAATACAAAGTGGCGCAAGTTTGTTTCATGTTCAACAACAACAGCAACCGCCGCAACATCATCAGCAGCATTTTATGCAAAGCAATACTATACAATATAATATTGGCACACAAAATATTGGAATACAGCAGCAGCAACAACAACAACAACAACAGCATACAATAATGTATGCCACAAATATGGGAACACCAGGTGCATCAATGCTGCATACTGGTGCTGCGTCAAGAATTAAAAGCGAATATCCAGCAGTATTGGAAATAGTAGAACAACCAGTCGAAAAATTTCGTTTTCGTTATAAATCCGAAATGCATGGTACACATGGTTCATTAAATGGCGCCAAATCACAGCGTACGCCGAAAACATTTCCCGAAGTGCAGCTACTCAAATATAATGGACCAGCCGTAATACGTTGTAGTCTATTTCAAACAAATTTAGATAGTCCACATTCACATCAACTGGTTGTACGTAAAGATGAACGTGATGTTTGTGATCCGCATGATTTACACGTGTCTATGGAACGTGGTTATGTTGCGCAATTTATGAATATGGGTATTATACATACCGCAAAAAAATTCATATTCGAAGAGTTACTTAAGAAGAAACAAGATCGCTTGGTCTTTCAAATGGGCAGACGTGAATTATCGACAAAGCAAATACAAGAGCTGCATAAGGAAACCGAGAAGGAGGCAAAAGATATGAATCTAAATCAGGTGCGTCTTTGTTATGAAGCATTTAAAATTGAAGACAACAATACATGGACACCAATTGCAGCGCCTGTATATACGCATCCCATAAATAATCGTAAATCAGCACAAACTGGTGAATTGCGTATTGTGCGTTTAAGTATTGCCGCTGGCAGCGTAGCTGGGAATGATGAACTTATTTTGCTTGTTGAAAAAGTTAGCAAAAAAAATATTAAAGTACGCTTTTTCGAACAGAACGAAGATGATGAAACTGTTTGGGAAGAATTTGCTAAATTTCGTGAATCGGATGTGCATCATCAATATGCAATAATATGTCAAACACCGCCGTATAAGAACAAAGACATAGATCGCCAAGTTGAAGTATTTATTGAATTAATACGTCCTTCGGATGATGAACGTTCCTATCCACCATTACCGTTTCGCTATAAGCCACGTGATGCTGTCGTTTCACGTAAACGTCGCCGCACTTCGTCAACAGCAACGAGTAGCTCGGGTACGGGCAGTGCTACAAGTTCACTTGAACTACCAAAAACAGTAGAAGAACAAGCTGCTGCTGTTTTACCAATGGCTGCCGGAGGCCCGCTTAAGGAATTAATTGGTTCACAAGTATTTGCAAATGCTATAATACCAAATTCAGAAGAATTACAAAAAATATGCCCAGATAATCTGTTTCCATCTGTTGATTTAATGGAATTTATGAGTGATTCTGGTATGCTGCAAAAAGATGGCGTTAGTAGTGTAGGAACGCGACAACAATTATTGCAGAAAATGTCAACGACAACAACTAAAAACAGTGGAACAACAAGCAACAACACCATCAGTACAAATGCATATTTACAGCGCATCTTTCATATTAACGATTCCGTACGTTACGGTAAAGGCACACTGGCAACGGAAATTTTTGATACAGCAGCACAACGTATACGTGATTTGTTTCTCGAACATGCTGATAAAAATATAAACGGTGATACGCTGCTGCATGAAGTTATTAGCCAGAAAATGGACAATGTTAAGCTAGCAATAAAACTTTTCGAAATTCTAACGTTTTTCAAATTACACGATTTGGTAGCGCAAGCAAATAATGCGGACAACGAGAGTGTTTTACATTGTGCCTGTTTACATGATCGTGCGCATTATATACGTCCATTGCTGGGACTACAATGTAATGCGAATACACAAGATCGTTACAATAATACAGCGTTACATGTTGCCGTCAAAGAAGAGCATACGAAATGCATTGAAAGCATACTAAATGCACAGAATGCGCATGTTGATATATCACTTAAGAACGATCAAGGTTTGACACCATTACATTTAGCCTTAATACAAAATAATTTCGATGTTGCTAAGAAACTGATCAAATACGATTGGAGCGCTATAAACGTATGCAATAAAGATGGCAATAATGCATTACATTTGGCAGTGCTGCAACAGAACGAAGAACTTGTTGTGCTCATATTGGATGCACAGAAAGTGGAGGATATTTTGATAGCGCGTAATACAGCAAATTATACAGCGCTTGAGTTGGCGCGGCAGTTAAGTTCAAAAATAATTGTACAACAGCTGGAACCACTCTATAAGCATTTACCAACGGTGGAACCTATAACCATTAAAGAAGAACTCGAAAGCTCTTCTACGGAAGACGATGAAGAAAGTAATGAGGCAATGGATACACAGGACGATGACGATGTGGATGTGGATGATGATGCAGCAAATGCTGAATTTTTGCTTAATATGAAAGTAACACGTAATCTTAAAGATTTACTTGAGGACGCAAAAACATTTAAAGAACTTGTAACGCTGTTGGATAAAAAAGTTGGACAAAAACCTAAATGGAAAGAATTGGCGGAAATATCAAAAATGCAGCATTTAGTATTTTTATGGGATAAAGCTGAGGCTATGCTTAATTATGTCAAAACGAAAGCTAAAAATGAAAATGGTTTTGAGCTGACAACATTTGCGCGTGCATTGGGTGCAGTTGATGCAAAAGCAGCGGAATTGTTGGAACGTAATAATTAA
- Protein Sequence
- MISEFYDMDKGEKIRYVSESSNASTSGYSTAGQTTLGNNSPSSQFSLSPAPSPVTATLQTEFSNLNLPSSSNSPNQQQLHNSPHRYVQLQTAVGGGGIQSGASLFHVQQQQQPPQHHQQHFMQSNTIQYNIGTQNIGIQQQQQQQQQQHTIMYATNMGTPGASMLHTGAASRIKSEYPAVLEIVEQPVEKFRFRYKSEMHGTHGSLNGAKSQRTPKTFPEVQLLKYNGPAVIRCSLFQTNLDSPHSHQLVVRKDERDVCDPHDLHVSMERGYVAQFMNMGIIHTAKKFIFEELLKKKQDRLVFQMGRRELSTKQIQELHKETEKEAKDMNLNQVRLCYEAFKIEDNNTWTPIAAPVYTHPINNRKSAQTGELRIVRLSIAAGSVAGNDELILLVEKVSKKNIKVRFFEQNEDDETVWEEFAKFRESDVHHQYAIICQTPPYKNKDIDRQVEVFIELIRPSDDERSYPPLPFRYKPRDAVVSRKRRRTSSTATSSSGTGSATSSLELPKTVEEQAAAVLPMAAGGPLKELIGSQVFANAIIPNSEELQKICPDNLFPSVDLMEFMSDSGMLQKDGVSSVGTRQQLLQKMSTTTTKNSGTTSNNTISTNAYLQRIFHINDSVRYGKGTLATEIFDTAAQRIRDLFLEHADKNINGDTLLHEVISQKMDNVKLAIKLFEILTFFKLHDLVAQANNADNESVLHCACLHDRAHYIRPLLGLQCNANTQDRYNNTALHVAVKEEHTKCIESILNAQNAHVDISLKNDQGLTPLHLALIQNNFDVAKKLIKYDWSAINVCNKDGNNALHLAVLQQNEELVVLILDAQKVEDILIARNTANYTALELARQLSSKIIVQQLEPLYKHLPTVEPITIKEELESSSTEDDEESNEAMDTQDDDDVDVDDDAANAEFLLNMKVTRNLKDLLEDAKTFKELVTLLDKKVGQKPKWKELAEISKMQHLVFLWDKAEAMLNYVKTKAKNENGFELTTFARALGAVDAKAAELLERNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -