Lvar021105.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leucophenga varia
Gene Symbol
dl
Assembly
GCA_018903435.1
Location
JAEIFJ010002087.1:382422-403962[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5e-73 1.9e-69 233.3 0.1 5 169 39 205 37 205 0.99
2 2 1 4e+03 -2.0 0.5 88 131 371 420 363 432 0.55

Sequence Information

Coding Sequence
ATGATTTCAGTGCCACAACAAATGCCGGCGCATGATTGTATCCTTTTCCAGGAATTGCGCGCTGATTCAGCTAATGGCGCACACCAAGCATGGGAACTAGAGCCATCCAAAAAGGAACAACCAGCCGGTAAGGCGCTACGTTTTCGCTATGAATGCGAAGGACGTTCAGCAGGCTCAATACCGGGCGTAAACTCAACACAAGAGAATAAGACGTATCCTACAATTGAAATTGTTGGTTATAAAGGACGTGCAGTAGTTGTAGTCTCTTGCGTGACCAAGGACACACCTTATCGTCCACATCCGCATAATCTAGTCGGCAAGGAGGGCTGTAAGAAGGGCGTTTGTACTTTGGAGATTAATAGCGAAACAATGCGTGCAGTTTTCAGTAATCTGGGCATACAATGCGTTAAGAAAAAGGATATTGAAGCAGCACTCAAGGCACGCGAGGAAATACGCGTTGATCCGTTTAAAACTGGTTTTACACATCGCTTTCAGCCATCAAGCATTGATCTAAATTCGGTACGTTTATGCTTTCAAGTATTTATGGAGAGCGAGCAGAAGGGACGTTTTACGCAACCGCTGCCGCCTGTAGTCTCTGAACCAATTTTTGACAAGAAAGCAATGTCCGATCTGGTCATTTGTCGTTTGTGTAGTTGCTCTGCAACAGTGCTGGGCAACACACAAATTATATTATTATGCGAAAAGGTAGCCAAAGAGGATATCGCAGTGCGATTCTTTGAGGAGAAAAATGGACAGACAGTCTGGGAGGCTTTTGGAGAATTTCAGCATACCGATGTACATAAGCAGACTGCAATAACGTTTAAAACGCCGCGTTATCATACGCTGGAGATAACCGAGCCAGCTAAGGTTTTCATACAACTGCGTCGCCCATCGGATGGTGTTACAAGTGAATCGCTGCCTTTTGAATATGTGCCGCTCGACTCAGGTAGGCATACATTTTGGCAGCTACGTCGGCATCTGAAACGGAAGCCAGACGATGATATTTTTCAGCAAGTACTCGATTTGGATGCCAAACGTGAAAGTGTAGTGTCGGATACAATTGAGGTAATCGATTTAAATACACCCACCGCAACGGAACCGCAGACACCAACAATGGAGCAAATGCTGTCAACATTGGAGCAGCAAAATGTTGCTGCAGCTGATTTAGAGGCAGCTACGCGACGTCGTCAGGAAAGTGAAATTGATAGCATTATTAATGAAAAAGTACGCGAATTGGAACAGTTGCAGCAACATGAACAGGAGCAATTAGAGCTACAAAATATTGAGGAACCACGACCGCTGACAGCAAATGATAAAATAAATGAATGGATGAAATCGAATGAGTTGCATCAAATGCATCAACAAGACAGCACTGACTCTGCTGTTGCCGCTGCTTCGCCTATTTTAAGCGCAGCACAAGCAGTGTCACACCAGACTGAAGAGGATAAAACTTTAAATGATTTACTTGAACAAGTTGCCGAATTAGATGAAATCTATACGGATCATGTGCTACGGCGTGATACTTATAATAATACAATTTTAAATGAATTAAATAGCGTTGATAAAACGCTGCCTGCCGCGGAGGAGGCAACAACAATTGGCAGCGGACATGCGCCAATGCTTACCGAAGAAAGTTTTGATGATGCTGCAACTTATACAAGTTTACAGATAGCTTTTAGAAATCCTGTTGCCATACCAATGCAGGATATAATGCCACCAACGCCCCCAGCATCACAATTGTCGCCGCCAAGACCGCCTACACTCAGTTCAGCTACATCATCGCCCATTATGCATATAACAGCAGCTGAGGAGGAAAAAGTGCCACCACTACCACCAAAGCGCATACGTAAACATGATTGTAATTCAGAGAATCGTTCAATTGAAGCAAATTGTGGCAGCAACACAAATACGCTTGAACGCAACACAAAATCACGCGCTGGCTCGCAAGCACCAGCGCCCATTATTATTATGAAAACACCAGATCAGTCACCTTTAAATAAACGACTGCCACCTAAGCCTAATCCCAACTTTAATACGCTACCCAGACAAAAGAAACCTGGCTTCTTTGCGAAACTTTTCTCACGACGCAAGAGTAGACCAGAACTTTCTAGCGAAGATTACAACACGCCCAACAGCTCAAAACTTGGTTCTAAAGCCACCAGTCCAAATGCTAGTCGTGATCCTAGTATTTCTAATTTTAATATTCACGATACAAATCGTGCATCGGTGCGTTCTATTAAATCTTTACAGCCGACGACGACAGCAAATTCAGGCACGCTACGCAGCAGCGCAAGTACAAAGACAAAGCCACCGAATAAGAAACTAGGTAAACCAGTCGGTCGCAGCTGCATATACCACTCAAGGGGAGATAGCGTTAGCAGTTTACAACAGCAGCCACAAAGGCAAAATGAAGAGTACTCCAATGCAAGTACCATAACACTAAGTGGTGGTCCCTTAGATCGACGTACAGTATCAGCATTACAGCTGGCCGAAATACCCATCAGCGAAGGCAATATGGAACTTGTTGCCATTGCTGATCGTCAGAGTTTGCGTAATTTGTGTGAGGGTGAATTTAATGTTTTACTCGATCCAAATGTCGATCTAACAGAGGCGGAACATTTTGCACTCTACACGAGTATACCACCACAGGCGACAACAAGTGAATTTGATGAAACGTCAGCATATTATGCACCCGTAGATGCGGGTGAAATACTGACACCAGATGAGGTGGCTAAGCGCTTGGCGGCGGCAAATTGTATTAATTAA
Protein Sequence
MISVPQQMPAHDCILFQELRADSANGAHQAWELEPSKKEQPAGKALRFRYECEGRSAGSIPGVNSTQENKTYPTIEIVGYKGRAVVVVSCVTKDTPYRPHPHNLVGKEGCKKGVCTLEINSETMRAVFSNLGIQCVKKKDIEAALKAREEIRVDPFKTGFTHRFQPSSIDLNSVRLCFQVFMESEQKGRFTQPLPPVVSEPIFDKKAMSDLVICRLCSCSATVLGNTQIILLCEKVAKEDIAVRFFEEKNGQTVWEAFGEFQHTDVHKQTAITFKTPRYHTLEITEPAKVFIQLRRPSDGVTSESLPFEYVPLDSGRHTFWQLRRHLKRKPDDDIFQQVLDLDAKRESVVSDTIEVIDLNTPTATEPQTPTMEQMLSTLEQQNVAAADLEAATRRRQESEIDSIINEKVRELEQLQQHEQEQLELQNIEEPRPLTANDKINEWMKSNELHQMHQQDSTDSAVAAASPILSAAQAVSHQTEEDKTLNDLLEQVAELDEIYTDHVLRRDTYNNTILNELNSVDKTLPAAEEATTIGSGHAPMLTEESFDDAATYTSLQIAFRNPVAIPMQDIMPPTPPASQLSPPRPPTLSSATSSPIMHITAAEEEKVPPLPPKRIRKHDCNSENRSIEANCGSNTNTLERNTKSRAGSQAPAPIIIMKTPDQSPLNKRLPPKPNPNFNTLPRQKKPGFFAKLFSRRKSRPELSSEDYNTPNSSKLGSKATSPNASRDPSISNFNIHDTNRASVRSIKSLQPTTTANSGTLRSSASTKTKPPNKKLGKPVGRSCIYHSRGDSVSSLQQQPQRQNEEYSNASTITLSGGPLDRRTVSALQLAEIPISEGNMELVAIADRQSLRNLCEGEFNVLLDPNVDLTEAEHFALYTSIPPQATTSEFDETSAYYAPVDAGEILTPDEVAKRLAAANCIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-