Lvar013661.1
Basic Information
- Insect
- Leucophenga varia
- Gene Symbol
- Bro
- Assembly
- GCA_018903435.1
- Location
- JAEIFJ010002684.1:606473-607168[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-73 1.5e-69 233.3 2.5 1 154 38 187 38 203 0.94 2 2 0.54 4.2e+03 -2.4 0.0 7 21 197 211 191 214 0.70
Sequence Information
- Coding Sequence
- ATGCATCATCAAAGTTTGGCAGATCCTTCATTGACTGGCATTATGCCCAACTATGATCCAGCGGCAATGGCTGCACTCTATGAACCACCAAAGCCACGTTTTATATTTAAAATGCCTCGCGTTGTACCAGATCAGAAATCGAAATTTGAAAGTGATGAGCTCTTCCGCCGCCTGAGCCGTGAAAGCGAGATACGGTATACAGGATACCGTGAGCGTGGTATAGACGAACGTCGTATACGCTTTCAGAATAATTGTCGCGAGGGACATGCGGAGATCTCGTTTGTTGCATCGGGCACCAATTTGATGCTCATCTTCAACGTCAATTCAAATCCTTATGTTCAGGAACCGGAATGCGATTTTGAGCGTGAACTTGGAAAAGTACATCTTCGTTCGCAATTTATAATGAACGGAGTCTGTGTGCGTTTCCGTGGTTGGATGCATTTGGAACGTTTAGACGGAGTTGGTAGCTTGGAATTTGATGAACGACGCGCTGCTCATGAAGATACTGTTCTCCGTGATCAAATAGAAAGCTGTCAGCGTCGCATGAATGACTCAAAACGCGCCTATTTAATGACACCGAACACTTATCCACAACAACAACAACATTCCTCTGAAGATGTTTTAAGACATATGCACAACCGTGGCGCTGGAGCTGTACATGGAGTACATGGTCAAGCTCCTCAAATGCATTGGTAG
- Protein Sequence
- MHHQSLADPSLTGIMPNYDPAAMAALYEPPKPRFIFKMPRVVPDQKSKFESDELFRRLSRESEIRYTGYRERGIDERRIRFQNNCREGHAEISFVASGTNLMLIFNVNSNPYVQEPECDFERELGKVHLRSQFIMNGVCVRFRGWMHLERLDGVGSLEFDERRAAHEDTVLRDQIESCQRRMNDSKRAYLMTPNTYPQQQQHSSEDVLRHMHNRGAGAVHGVHGQAPQMHW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00890731;
- 90% Identity
- -
- 80% Identity
- -