Lmon004769.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leucophenga montana
Gene Symbol
ken
Assembly
GCA_035044765.1
Location
JAWNNQ010000656.1:119321-122242[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.0017 0.1 13.4 4.7 2 23 216 237 215 238 0.94
2 16 7.1e-07 4.2e-05 24.0 1.6 1 23 245 268 245 268 0.96
3 16 0.34 20 6.1 0.1 2 23 305 326 304 326 0.93
4 16 0.071 4.2 8.3 0.6 1 23 407 431 407 431 0.93
5 16 0.65 38 5.3 1.0 1 21 438 458 438 459 0.92
6 16 0.0033 0.19 12.5 1.8 1 23 468 490 468 490 0.96
7 16 0.00069 0.041 14.6 1.7 3 23 499 520 498 520 0.91
8 16 0.0016 0.094 13.5 1.3 2 23 528 549 527 549 0.96
9 16 0.15 8.7 7.3 0.0 2 21 576 595 575 596 0.93
10 16 0.052 3 8.7 5.3 1 23 646 669 646 669 0.98
11 16 0.13 7.8 7.5 3.5 2 23 707 729 706 729 0.95
12 16 0.00054 0.032 15.0 2.3 2 23 762 784 761 784 0.94
13 16 8.4e-06 0.00049 20.7 0.6 1 23 802 824 802 824 0.96
14 16 0.045 2.6 8.9 3.7 1 23 830 852 830 852 0.99
15 16 2.9e-05 0.0017 19.0 0.9 1 23 858 880 858 880 0.98
16 16 2.3e-05 0.0014 19.3 2.0 1 23 886 908 886 908 0.98

Sequence Information

Coding Sequence
ATGCCAGCAGCAACGATTTGCCTCACCTGTGATACGAGCGCAGCCACCGAGCTGTATGAAATAAAGTCAACATACACTGAGAAGTATCCCAGAAGGCAACTGCTGGAATTGCTGAAGGAGCTAGTAGAGATTGAACCAAATATGGCGTATGAGGCACAACTGCCACAGCATCTTTGTGGCAACTGCACGAAAAGATTAAATAGCGCATACGATTTTGTAATACAGGCGCGCGAGGCATATCAGCGACTGCTGGATACTCTTAAACCGGACTTAAAGCCAAGCACAAGTGTATGTTGTAATCAAGATGCACCTTTGGAGCAGTTTGTTGCTATTAAACTAGAGCCCGGCGGTGAAGACATAACGCCTGTAGAGTTCGCTGAAACACTAATGAAGCAACATAAATCAGATCAGGATAATGATAACGAAATGCAGCACGATTGTGTGGCACTTGGCGAAGGACGTAATGCCGAtgaaaaagaacaaaatgaTCCCTTAACAATAATGAAACGGAGAAAAGTAAAAGCACAGCGTTTTGATGCTAATAATGCTGGTGAAAACTCTAGTTCGAGTGATGATGATGAGCCATTGCTAAAGCGCaaagtaaaaatgcaaaaagttaaaaagcagGAAAACCAATATACTTTGTCATGTAATCAATGCAGTAAAACTTTTCGTTTGCGCCGCAGTTTAAACGCTCACAAACAGAAACATCATCCAAAAAGCGATGAGACCCATGATTGTCCAGAATGCAAACGTAAGTTCAGTCGCAAGGACAGTTTGGAGGTGCACTTGCGAACAATACATGCACCAAATGATGGAACGCCACAGCAATATATTCCAACAATTTCCGAACGGAAAAAGGCTAAAGAGCTTGATTTGAATCTCTGCAAGCCGCATGGTTGCAAGTTAATACAGTGTATGATTTGTTTGCAATACTTTACCAAAATATCTGAACTTTATAGCCATTTAGTTGCTCATCCGCAATTGGAAACATTCGTGAAACGCACGGAAACACTGCAGGAGATTGCAGAATCGTTCTATCCTGATATGAAGGAAGATCTTACAGAAGCGGCATTATTGGCGCGTATACGCAAAGATCTAAAAGCGGAAAAGTATGTGTATTTTTATTCGATAACAAACCAGGCAGGCTACGAGTTAAGTTTGGACAGTTCAGACACAGATGGTGATGACggtaataaaaaatcaaagaagcATTTCTACGCTTGCGATTTGTGCGAAAACATAAAGTTTGACCGTAGATATCAACTCTTCGAACATCAACGAGCTCAGCATGCATGGGAGGAGGCTCAACATGTCTGTCGGCGTTGTGATGCACGTTTTGTTAGCCAGCAGGTGCTAGATCATCATTACCAGTCACAATGTCGAAACTCTAAAAAACGTTTTCGCTGCAATAAATGCCCGCTCCGCTTTCGCTGGAAGCAGAATCTTAAAGCGCACTACACGGAACACAAGAATAGAatgcaATCCAATATTTGCGAGCAGTGCAATCGTTCCTTTAAAGATAAGAAATCGTTGTCGACGCATGTACATGCTGTGCACACTGATGCCTCGAATCTTTTACCCTGTCAATGGTGCAATCGGTTATTCTATAGccgtgaaaatttgttaaaacattttaagcGTCACGGTCTGAGGGAGCGCGATTTACCACTGGCCGAAGTACTTCTTAAAGCTACAACACAACCCAATGGAGCCAAGCGCATCAGTTGCAAGGTGTGTCAAGTGCAATTCGGAAGTATTGCAGATTTAAgagtacatatactaatggaccTCAGGTTAAATTTGAGTGCACATCAGAGCTATGAATCAATGGCCAATTATTCAATTACAAACGATGTGGGTTTTGAGCTACATTTAGACGACTCGGAAACGGATAATGATGAATCAGCAGGAAGTACGCCGAATACCACACCATATAAATGTGAGATTTGTCAGGTGCAATGCCATCGACGCTATGAAATGTTCCAACATCAGCGCGTAATGCACACATTTGAACCCTTGCCACATACATGCACAGATTGCATATTTAAAACGGTCTGCAAGCGCATACTTGAGCATCATCAGCGTACTCATTGTCAAAATAAGGAGAAGCAACTTAGCTGCAAGCACTGCAGTTACAAATTTATGTGGCCAGAAAATTTGGAACAACATCAACATAGGCTACATGCTGGCCTATTTGCTGGTAGCAGTACTGATGTAAATGTAGAGACGCCAACGCAGTCAACGCAACTGGAGACTAAATCATCATCAACGGAATTGTTGAACTGTCCACATTGTGATCGTACCTATATGCATGAATCACGGCTAAACAATCACATACGTGATGTGCACAGTGAAAACAGCGAGcctaataaaaagaagaaaaggcTATCCGAACGTAAATATCTCTGTTCACATTGTGGCAAAGAATCGTCATCGCCATCTGCTTTAGCCACGCATATACGGCGTCATACCGGCGATAAACCTTTCAAATGTGATCTGTGCGAGTTGGGATTTCCACGTCACTGTGAAATGCTAGAGCATCGTAGGAAACACACTGGCGAAAAACCATACCATTGTACTGTCTGTGGCATGGAGTTTGCAGTATCGACCAAACTAAAGCGACACATGTTGATACACACCGGATTGAATCCCTTCAAATGCACGCTATGCGAAAAGGGCTATCGCCAGAAGAAGGATCTCACGCTACATATGCAGCAGCATACCGCAGCATAA
Protein Sequence
MPAATICLTCDTSAATELYEIKSTYTEKYPRRQLLELLKELVEIEPNMAYEAQLPQHLCGNCTKRLNSAYDFVIQAREAYQRLLDTLKPDLKPSTSVCCNQDAPLEQFVAIKLEPGGEDITPVEFAETLMKQHKSDQDNDNEMQHDCVALGEGRNADEKEQNDPLTIMKRRKVKAQRFDANNAGENSSSSDDDEPLLKRKVKMQKVKKQENQYTLSCNQCSKTFRLRRSLNAHKQKHHPKSDETHDCPECKRKFSRKDSLEVHLRTIHAPNDGTPQQYIPTISERKKAKELDLNLCKPHGCKLIQCMICLQYFTKISELYSHLVAHPQLETFVKRTETLQEIAESFYPDMKEDLTEAALLARIRKDLKAEKYVYFYSITNQAGYELSLDSSDTDGDDGNKKSKKHFYACDLCENIKFDRRYQLFEHQRAQHAWEEAQHVCRRCDARFVSQQVLDHHYQSQCRNSKKRFRCNKCPLRFRWKQNLKAHYTEHKNRMQSNICEQCNRSFKDKKSLSTHVHAVHTDASNLLPCQWCNRLFYSRENLLKHFKRHGLRERDLPLAEVLLKATTQPNGAKRISCKVCQVQFGSIADLRVHILMDLRLNLSAHQSYESMANYSITNDVGFELHLDDSETDNDESAGSTPNTTPYKCEICQVQCHRRYEMFQHQRVMHTFEPLPHTCTDCIFKTVCKRILEHHQRTHCQNKEKQLSCKHCSYKFMWPENLEQHQHRLHAGLFAGSSTDVNVETPTQSTQLETKSSSTELLNCPHCDRTYMHESRLNNHIRDVHSENSEPNKKKKRLSERKYLCSHCGKESSSPSALATHIRRHTGDKPFKCDLCELGFPRHCEMLEHRRKHTGEKPYHCTVCGMEFAVSTKLKRHMLIHTGLNPFKCTLCEKGYRQKKDLTLHMQQHTAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00891181;
90% Identity
-
80% Identity
-