Basic Information

Insect: Leucophenga montana
Gene Symbol: -
Assembly: GCA_035044765.1
Location: JAWNNQ010001757.1:1454677-1459800[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.016 0.93 10.4 3.3 1 23 263 285 263 285 0.97

2 16 2.6e-05 0.0015 19.1 5.2 1 23 293 316 293 316 0.95

3 16 0.018 1 10.2 0.3 2 23 353 374 352 374 0.95

4 16 0.038 2.2 9.2 2.6 1 23 466 490 466 490 0.96

5 16 0.0016 0.096 13.5 2.3 1 23 527 549 527 549 0.98

6 16 9.3e-05 0.0055 17.4 0.2 3 23 558 579 556 579 0.97

7 16 0.052 3 8.7 7.8 1 23 586 608 586 608 0.95

8 16 0.0093 0.55 11.1 0.1 2 21 635 654 634 655 0.93

9 16 0.0038 0.22 12.3 3.0 1 23 702 725 702 725 0.97

10 16 0.048 2.9 8.8 2.0 2 23 763 784 762 785 0.93

11 16 0.0022 0.13 13.1 1.0 2 23 829 851 828 851 0.94

12 16 0.13 7.7 7.5 0.1 1 23 869 891 869 891 0.94

13 16 0.0055 0.33 11.8 4.6 1 23 897 919 897 919 0.99

14 16 7.1e-05 0.0042 17.8 4.0 1 23 925 947 925 947 0.98

15 16 0.00028 0.017 15.9 1.7 1 23 953 975 953 975 0.95

16 16 7.7e-06 0.00046 20.8 0.4 1 23 981 1003 981 1003 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.016	0.93	10.4	3.3	1	23	263	285	263	285	0.97
2	16	2.6e-05	0.0015	19.1	5.2	1	23	293	316	293	316	0.95
3	16	0.018	1	10.2	0.3	2	23	353	374	352	374	0.95
4	16	0.038	2.2	9.2	2.6	1	23	466	490	466	490	0.96
5	16	0.0016	0.096	13.5	2.3	1	23	527	549	527	549	0.98
6	16	9.3e-05	0.0055	17.4	0.2	3	23	558	579	556	579	0.97
7	16	0.052	3	8.7	7.8	1	23	586	608	586	608	0.95
8	16	0.0093	0.55	11.1	0.1	2	21	635	654	634	655	0.93
9	16	0.0038	0.22	12.3	3.0	1	23	702	725	702	725	0.97
10	16	0.048	2.9	8.8	2.0	2	23	763	784	762	785	0.93
11	16	0.0022	0.13	13.1	1.0	2	23	829	851	828	851	0.94
12	16	0.13	7.7	7.5	0.1	1	23	869	891	869	891	0.94
13	16	0.0055	0.33	11.8	4.6	1	23	897	919	897	919	0.99
14	16	7.1e-05	0.0042	17.8	4.0	1	23	925	947	925	947	0.98
15	16	0.00028	0.017	15.9	1.7	1	23	953	975	953	975	0.95
16	16	7.7e-06	0.00046	20.8	0.4	1	23	981	1003	981	1003	0.97

Sequence Information

Coding Sequence: ATGCTTGTCCTGCCGCTGTGTCGTACTTGCGATGCATGTACGGCGACCGAGCTCTTCGAGCTAAAATCAGCGTACACGTCTAAGTATCCGGAAAAGCAATTGCTGGATTTGTTAATGGAATTAGTTGACATAAATCAAAACATGGCCTACGAATCGCAATTGCCGCAGAAAATATGCAGCAATTGCATGGAAAAATTGAGCAATGCCTACGATTTTATGCAGCAGGCACGCGAGGCAAATCGGCGGCTACTGGATGCGCTTAAgctgcattttaaatttgatgctTGTCTACAAGAAGCACCTCTGGAAGAATTTCTAGCTATTAAACTAGAACCCAGTGGTGAGGAGACATCAACACCAATGGAACTTGGAGTTGCAACGTctgtaacagcaacaacagcagccgccGGAGTAGCAGCAACACCAATGGACGATTTGGAGACATTGCATGaggataaacaaaatattaagctGGATTCAGATGAACACAATGATTGGAATGTATTTGTAGAAAAACAAGAGCAAGAAACGCCACAGCAAAAGTTGCGACAGCAACCTTTTGATCCATTAACAATAAATCAAGAAACGCAGAACAAAAACACGCGCGAGCATCGACGCACAACAAATAAGATTACCGTAGATAATGCTGCTAACGATAGTGACTGCTCTAGTACATCATCCTCTTCAGCAACAAGCGctggtagcagcagcagcagcgatgaTACACCATTAATGCAACACAAACTAAGATTACAAAAGGCtgctaaacaaaataaaatcaaacctTACGCTTGCGATCTATGCGAGAAAAGTTATCGTTTGCGATGCAGTCTACAAACACATAAAGAGAAACATTTAAACAATTCAGTTGAATCGCATACCTGTGAACATTGTACTAAGAAATTCAAACGGAAAGAGACCTTGGAGCGTCATCTGAAGGCAGCGCATGCGGCTGTAGCTAATGCCGCACTAACATCAAGTCGAAAGTTATGCGCAAACAAACAAGCCAAAGAAATCGATTTGAATCTCTGCAAACCGCATGGCTGCAAAATAATACAATGTAtgatttgtttgcaaaattttacaaaaataagcgATCTGCGCAGTCATTTAAGTGCACATCCAGAAAATATAACATTCAGAGCACGGATGGAGACACTGCAAGAGACTGCTATATCGTTCTATGGCGAGCTAAAGCAAGAATTAACGGAGTCGGAATTATTGGCGCGCATACGCCAAGATTTGAAGCaagagaaatatatgtatttttattcgATTACCAATCAAGCGGGTTATGAGTTAAGACTTGAAAGTTCAGATACTGATAGTGAAATCGATTTGGATGCATCTGCCCAAACGAAAGCTGTAAGAAAGCAAACGAAGCATAAGCAACAGTATACCTGCGATTTGTGTACGAATATGAAGTTTGATCGGAAATATCAACTCTTTGAACATCAGCGGCAGCAACATGCCTGGCAGGAGGCAAAGCATGTCTGTCGGCGTTGTGATGCACGTTTCCTTAGCGAAGCTGTGCTGCTGCATCATTGGGAAACGCAATGTCGTAATACAAAGAAACGTTATCGCTGCCCGAAATGTCCGCTACGTTATCGTTGGAAACATAATCTTAAAGCGCACTACAAAGCTCACAAAGTTAAGACACAATCACTGCTATGCACACAATGCGATCGTAGTTATGATGATCAAAAATCGTTGACAATACACATACTCACTGTGCATACGGCTGGCACGAATCTATTCAAATGCCATTGGTGTAATCGCAAGTTCTATCGTCGCGATTTGTGGATCAAACATTGCAAGCGTCATGGCTTGAAGGAGCACGATGTACCATTGGCTGAAATGATGATTAAGGCCACTGAACAGCCGAACGGTGCTAAGCGTATAAGCTGCAAGATCTGTCAATTacaatttgaacattttgcTGATTTAAGGGCGCATATACTAATGGAGTACAGATTGAATTTGAGCGCACATCAGAGCTATTGTTCGTTGGCCAATTATTCGATTACCAATAGCGCAGGCTTTGAGTTGCACCTGGATGATTCGGAAACCGATAATGGCGaagatttgcaaaatattaaacccTATAAGTGTGAAATTTGTCAAGTGGAATGCCGAAGACGTTATGAAATGTTTCAGCATCAGCGTGCAACGCATAATCTTGAATCGTTGCCGCACGCATGCGATAAATGCATATTCAGAAGTGTATCTAAGAACATACTTGAGCATCATCAACGCACACAATGTCAGAATACCGAGAAACAGCTTAGCTGCGAACATTGCAACTATAAGTTTATGTGGCCGGAAAATTTAACACAACATGGTCAAATCCATCACGCTGACGTATTAGTTAATAAAAACAAGCATTCCACTGCATCCAACATCACCAATGTTAGTCAAGCGGAAACGAGTGAAGCGACTGTGCCCACAGCAACCAAGTCAACGACTGCGcctacaatattattaaattgtcCACATTGTGATCGCACTTATATGCTTGAATCACGTCTTAAAAATCATATACGCGATGTACACAGTGAAGGAGGCAGCGAAGCACTTAAAAAGCGCAAGGAAGCGGCACGGAAATTTCTGTGTTCACAATGTGGCAAGGATATGCTAACGGCGGGCGCTTTAGTAACGCATATGCGACGCCATACTGGCGAAAAACCATTCAAATGTGACTTGTGCGATATGCGTTTTCCACGCCATTGTGAAATGCTGCAACATCGCAGAGTGCATACTGGCGAAAAGCCTTATCATTGCACGGTCTGCGGCAAGGACTTTGCACAATCGTGTAAATTAAAGCGTCACCTGCTAATACACAGTGGACTGAAGCCGCATCAATGTACATACTGTGAGAAGAGCTATCGTCAATTGATTGATCTTAAGATACACTTGGTGCAGCATACTGGCGAATCGCCATTCGAATGTGCCACATGTGGCAAGTCTTTCAATCAACGTGCGGCACTCAAAAATCATCGTGTCATGCATGGTCATTTATAA
Protein Sequence: MLVLPLCRTCDACTATELFELKSAYTSKYPEKQLLDLLMELVDINQNMAYESQLPQKICSNCMEKLSNAYDFMQQAREANRRLLDALKLHFKFDACLQEAPLEEFLAIKLEPSGEETSTPMELGVATSVTATTAAAGVAATPMDDLETLHEDKQNIKLDSDEHNDWNVFVEKQEQETPQQKLRQQPFDPLTINQETQNKNTREHRRTTNKITVDNAANDSDCSSTSSSSATSAGSSSSSDDTPLMQHKLRLQKAAKQNKIKPYACDLCEKSYRLRCSLQTHKEKHLNNSVESHTCEHCTKKFKRKETLERHLKAAHAAVANAALTSSRKLCANKQAKEIDLNLCKPHGCKIIQCMICLQNFTKISDLRSHLSAHPENITFRARMETLQETAISFYGELKQELTESELLARIRQDLKQEKYMYFYSITNQAGYELRLESSDTDSEIDLDASAQTKAVRKQTKHKQQYTCDLCTNMKFDRKYQLFEHQRQQHAWQEAKHVCRRCDARFLSEAVLLHHWETQCRNTKKRYRCPKCPLRYRWKHNLKAHYKAHKVKTQSLLCTQCDRSYDDQKSLTIHILTVHTAGTNLFKCHWCNRKFYRRDLWIKHCKRHGLKEHDVPLAEMMIKATEQPNGAKRISCKICQLQFEHFADLRAHILMEYRLNLSAHQSYCSLANYSITNSAGFELHLDDSETDNGEDLQNIKPYKCEICQVECRRRYEMFQHQRATHNLESLPHACDKCIFRSVSKNILEHHQRTQCQNTEKQLSCEHCNYKFMWPENLTQHGQIHHADVLVNKNKHSTASNITNVSQAETSEATVPTATKSTTAPTILLNCPHCDRTYMLESRLKNHIRDVHSEGGSEALKKRKEAARKFLCSQCGKDMLTAGALVTHMRRHTGEKPFKCDLCDMRFPRHCEMLQHRRVHTGEKPYHCTVCGKDFAQSCKLKRHLLIHSGLKPHQCTYCEKSYRQLIDLKIHLVQHTGESPFECATCGKSFNQRAALKNHRVMHGHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00890335;
90% Identity: iTF_00891175;
80% Identity: -