Basic Information

Insect: Leucophenga montana
Gene Symbol: -
Assembly: GCA_035044765.1
Location: JAWNNQ010001757.1:1461597-1467212[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0022 0.13 13.1 1.5 1 23 271 293 271 293 0.97

2 16 8.6e-05 0.0051 17.5 3.8 1 23 301 324 301 324 0.93

3 16 0.018 1.1 10.2 0.3 2 23 361 382 360 382 0.95

4 16 0.038 2.3 9.2 2.6 1 23 474 498 474 498 0.96

5 16 0.012 0.7 10.8 4.2 1 23 535 557 535 557 0.97

6 16 0.00011 0.0064 17.2 0.3 3 23 566 587 565 587 0.98

7 16 0.052 3.1 8.7 7.8 1 23 594 616 594 616 0.95

8 16 0.0094 0.55 11.1 0.1 2 21 643 662 642 663 0.93

9 16 0.0038 0.23 12.3 3.0 1 23 710 733 710 733 0.97

10 16 0.049 2.9 8.8 2.0 2 23 771 792 770 793 0.93

11 16 0.00057 0.034 14.9 2.7 2 23 837 859 836 859 0.94

12 16 0.0022 0.13 13.1 0.1 1 23 877 899 877 899 0.95

13 16 0.0056 0.33 11.8 4.6 1 23 905 927 905 927 0.99

14 16 4.1e-06 0.00024 21.6 1.2 1 23 933 955 933 955 0.98

15 16 0.00019 0.011 16.4 2.3 1 23 961 983 961 983 0.95

16 16 0.00017 0.0098 16.6 0.2 1 21 989 1009 989 1013 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0022	0.13	13.1	1.5	1	23	271	293	271	293	0.97
2	16	8.6e-05	0.0051	17.5	3.8	1	23	301	324	301	324	0.93
3	16	0.018	1.1	10.2	0.3	2	23	361	382	360	382	0.95
4	16	0.038	2.3	9.2	2.6	1	23	474	498	474	498	0.96
5	16	0.012	0.7	10.8	4.2	1	23	535	557	535	557	0.97
6	16	0.00011	0.0064	17.2	0.3	3	23	566	587	565	587	0.98
7	16	0.052	3.1	8.7	7.8	1	23	594	616	594	616	0.95
8	16	0.0094	0.55	11.1	0.1	2	21	643	662	642	663	0.93
9	16	0.0038	0.23	12.3	3.0	1	23	710	733	710	733	0.97
10	16	0.049	2.9	8.8	2.0	2	23	771	792	770	793	0.93
11	16	0.00057	0.034	14.9	2.7	2	23	837	859	836	859	0.94
12	16	0.0022	0.13	13.1	0.1	1	23	877	899	877	899	0.95
13	16	0.0056	0.33	11.8	4.6	1	23	905	927	905	927	0.99
14	16	4.1e-06	0.00024	21.6	1.2	1	23	933	955	933	955	0.98
15	16	0.00019	0.011	16.4	2.3	1	23	961	983	961	983	0.95
16	16	0.00017	0.0098	16.6	0.2	1	21	989	1009	989	1013	0.90

Sequence Information

Coding Sequence: atgcctGCCATGCCGCTGTGTCGCACTTGTGATGCATGTACGGCGACCGAGCTTTTCGAGCTAAAATCAGCGTACACGTCTAAGTATCCGGAAAAGCAATTGCTGGATTTGTTAATGGAATTAGTTGACATAAATCAAAACATGGCCTACGAATCGCAATTGCCGCAGAAAATATGCAGCAATTGCATGGAAAAATTGAGCAATGCCTACGATTTTATGCAGCAGGCACGCGAGGCAAATCGGCGGCTACTGGATGCGCTTAAGCTGGATTTTAAATTTGATGCTTGTCTACAAGAAGCACCGCTCGAAGAATTTCTAGCTATTAAACTAGAACCCAGTGGTGAGGAGACAGCAACACCAATGGAACTTGGAGTTGCAACGTctgaaacagcaacaacagcagcagccggagcaacagcaacaccaataGACGTTTCGGAAATATTGCATAAGGATAATCAAAATAATAAGCTGGAATCAGATGATGATGAGCACAACGATTGGAatgcatttgaagaaaaacaaagtgATTATAGTGCTGATGAGCAAGAAACGCCACAGCAAAagttacaacagcaacaatttgatCCATTAACAATAAATCAAGAAACGCAGAGCAAAAACACGCGCCAACAGCGACGCACAACAAATAAGATTACCGTAGATAATGCTGCTATTGATAGTGACTGCTCTAGTACATCATCCTCTTCAGCAACAAGCGctggtagcagcagcagcagcgatgaTACACCATTAATGCAACACAAACTAAGATTACAAAAGGCTGCTAAACAACATAAAATCAAACCTTACGCTTGCGATCTATGCGAGAAAAGTTATCGTTTGCGACGCAGTCTACAAACGCATAAAGAGAAACATTTAAACAATACAATTGAATCGCATGCTTGTGCACATTGTACTAAGAAATTCAAACGGAAAGAGACCTTGGAGCGTCATCTAAAGGCAGCGCATGCGGCTGTAGCCAATGCCGCACTAGCATTAAGTCCGAAATTATGCGCACGCAAACAAGCCAAAGAAATCGATTTGAATCTTTGCAAACCGCATGGCTGCAAAATAATACAATGTAtgatttgtttgcaaaattttacaaaaataagcgATCTGCGAAGTCATTTGAGTGCACATCCAGAAAATATAACATTCAGTGCACGCATGGAGACACTGCAAGAGATTGCTATATCGTTCTACGGCGAGCTAAAGCAAGAATTAACGGAGCCGGAATTATTGGCGCGCATACGCCAAGATTTGAAGCaagagaaatatatgtatttctattCGATTACCAATCAAGCGGGTTATGAATTAAGACTTGAAAGTTCAGATACTGATAGTGAAATCGATTTGGATGCATCTGCGCAAACGAAAGCTGCAAAAAAGCAAACGAAGCGTAAGCAACAGTATACTTGCGATTTGTGTACGAATATGAAGTTTGATCGGAAATATCAACTCTTTGAACATCAGCGGCAGCAACATGCCTGGCAGGAGGCAAAGCATGTCTGTCGGCGTTGTGATGCACGTTTCCTAAGCGAAGCAGTGTTGCTGCATCATTGGGAAACGCAATGTCGTAATACGAAAAAACGTTATCGCTGCAAAAAATGCCCGTTACGTTATCGTTGGAAACATAATCTTAAAGCGCACTATAAAGATCACAAAATTAAGACACAATCACTACTATGCACACAATGCGATCGTAGTTATGATGATCAAAAATCGTTGACAATACACATACTCACTGTGCATACGGCTGGCACGAATCTATTCAAATGCCATTGGTGTAATCGCAAGTTCTATCGTCGCGATTTGTGGATCAAACATTGCAAGCGTCATGGCTTGAAGGAGCACGATGTACCATTGGCTGAAATGATGATTAAGGCCACTGAACAGCCGAACGGTGCTAAGCGTATAAGCTGCAAGATCTGTCAATTacaatttgaacattttgcTGATTTAAGGGCGCATATACTAATGGAGTACAGATTGAATTTGAGCGCACATCAGAGCTATTGTTCGTTGGCCAATTATTCGATTACCAATAGCGCAGGCTTTGAGTTGCACCTGGATGATTCGGAAACCGATAATGGCGaagatttgcaaaatattaaacccTATAAGTGTGAAATTTGTCAAGTGGAATGCCGAAGACGTTATGAAATGTTTCAGCATCAGCGTGCAACGCATAATCTTGAATCGTTGCCGCACGCATGCGATAAATGCATATTCAGAAGTGTATCTAAGAACATACTTGAGCATCATCAACGCACACAATGTCAGAATACCGAGAAACAGCTTAGCTGCGAACATTGCAACTATAAGTTTATGTGGCCGGAAAATTTGACACAACATGGTCAAATCCATCACGCTGACGTATTAGTTAATAAAAACGAGCATGCCACTGCATCCAACATCACCAATGTTAGTCAAGCGGAAACGAGTGAAGCGACTGTGCCCACAGCAGGCAAGTCAACGACTGCGcctacaatattattaaattgtcCACATTGTGATCGCACTTATATGCATGAATCACGTCTTAAAAATCATATACGCGATGTACACAGTGAAGGAGGCAGCGAAGCACTTAAAAAGCGCAAGGAAGCGGCACGCAAATTTCTGTGTTCACAATGTGGCAAGGATATGCCGACGGCGGGCGCTTTAGTAACGCATATGCGACGCCATACTGGCGAAAAACCATTCAAATGTGACTTGTGCGATATGCGTTTTCCACGCCATTGTGAAATGCTGCAACATCGCAGAGTGCATACTGGCGAAAAGCCTTATCATTGCACGGTCTGCGGCAAGGACTTTGCACAATCGGGTAAATTAAAGCGTCACTTGCTAATACACAGTGGACTGAAACCGCATCAATGTACATACTGTGAGAAGAGCTATCGTCAATTGAACGACCTTAAGATACACTTGGTGCAGCATACTGGCGAATCGCCATTCGAATGTGCCACATGTGGCGAGTCTTTCAATCAACGTGCGGCGCTCAAAAATCATCGTGTCATGCGTGGTCATTTATAA
Protein Sequence: MPAMPLCRTCDACTATELFELKSAYTSKYPEKQLLDLLMELVDINQNMAYESQLPQKICSNCMEKLSNAYDFMQQAREANRRLLDALKLDFKFDACLQEAPLEEFLAIKLEPSGEETATPMELGVATSETATTAAAGATATPIDVSEILHKDNQNNKLESDDDEHNDWNAFEEKQSDYSADEQETPQQKLQQQQFDPLTINQETQSKNTRQQRRTTNKITVDNAAIDSDCSSTSSSSATSAGSSSSSDDTPLMQHKLRLQKAAKQHKIKPYACDLCEKSYRLRRSLQTHKEKHLNNTIESHACAHCTKKFKRKETLERHLKAAHAAVANAALALSPKLCARKQAKEIDLNLCKPHGCKIIQCMICLQNFTKISDLRSHLSAHPENITFSARMETLQEIAISFYGELKQELTEPELLARIRQDLKQEKYMYFYSITNQAGYELRLESSDTDSEIDLDASAQTKAAKKQTKRKQQYTCDLCTNMKFDRKYQLFEHQRQQHAWQEAKHVCRRCDARFLSEAVLLHHWETQCRNTKKRYRCKKCPLRYRWKHNLKAHYKDHKIKTQSLLCTQCDRSYDDQKSLTIHILTVHTAGTNLFKCHWCNRKFYRRDLWIKHCKRHGLKEHDVPLAEMMIKATEQPNGAKRISCKICQLQFEHFADLRAHILMEYRLNLSAHQSYCSLANYSITNSAGFELHLDDSETDNGEDLQNIKPYKCEICQVECRRRYEMFQHQRATHNLESLPHACDKCIFRSVSKNILEHHQRTQCQNTEKQLSCEHCNYKFMWPENLTQHGQIHHADVLVNKNEHATASNITNVSQAETSEATVPTAGKSTTAPTILLNCPHCDRTYMHESRLKNHIRDVHSEGGSEALKKRKEAARKFLCSQCGKDMPTAGALVTHMRRHTGEKPFKCDLCDMRFPRHCEMLQHRRVHTGEKPYHCTVCGKDFAQSGKLKRHLLIHSGLKPHQCTYCEKSYRQLNDLKIHLVQHTGESPFECATCGESFNQRAALKNHRVMRGHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00890335;
90% Identity: iTF_00891186;
80% Identity: -