Basic Information

Insect: Leucophenga montana
Gene Symbol: -
Assembly: GCA_035044765.1
Location: JAWNNQ010000695.1:895075-898194[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.9e-06 0.00011 22.7 1.4 1 23 246 268 246 268 0.98

2 16 0.0029 0.17 12.7 2.6 1 23 275 298 275 298 0.93

3 16 0.0065 0.38 11.6 0.3 2 23 333 354 332 354 0.96

4 16 0.00024 0.014 16.1 2.3 1 23 441 464 441 464 0.97

5 16 0.16 9.4 7.2 1.5 1 22 471 492 471 492 0.95

6 16 0.0052 0.3 11.9 3.6 1 23 501 523 501 523 0.98

7 16 9.8e-06 0.00058 20.4 0.2 3 23 532 553 530 553 0.96

8 16 0.0022 0.13 13.0 3.6 2 23 561 582 560 582 0.97

9 16 0.0031 0.18 12.6 0.1 2 21 609 628 608 629 0.93

10 16 0.44 26 5.8 6.9 1 23 675 698 675 698 0.96

11 16 0.0037 0.22 12.3 0.2 3 23 737 758 735 758 0.95

12 16 0.00081 0.048 14.4 0.7 2 23 787 809 786 809 0.94

13 16 0.008 0.47 11.3 0.1 1 23 823 845 823 845 0.95

14 16 0.0037 0.22 12.4 0.1 1 23 851 873 851 873 0.97

15 16 4e-07 2.3e-05 24.8 0.7 1 23 879 901 879 901 0.99

16 16 0.00027 0.016 15.9 5.2 1 23 907 929 907 929 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.9e-06	0.00011	22.7	1.4	1	23	246	268	246	268	0.98
2	16	0.0029	0.17	12.7	2.6	1	23	275	298	275	298	0.93
3	16	0.0065	0.38	11.6	0.3	2	23	333	354	332	354	0.96
4	16	0.00024	0.014	16.1	2.3	1	23	441	464	441	464	0.97
5	16	0.16	9.4	7.2	1.5	1	22	471	492	471	492	0.95
6	16	0.0052	0.3	11.9	3.6	1	23	501	523	501	523	0.98
7	16	9.8e-06	0.00058	20.4	0.2	3	23	532	553	530	553	0.96
8	16	0.0022	0.13	13.0	3.6	2	23	561	582	560	582	0.97
9	16	0.0031	0.18	12.6	0.1	2	21	609	628	608	629	0.93
10	16	0.44	26	5.8	6.9	1	23	675	698	675	698	0.96
11	16	0.0037	0.22	12.3	0.2	3	23	737	758	735	758	0.95
12	16	0.00081	0.048	14.4	0.7	2	23	787	809	786	809	0.94
13	16	0.008	0.47	11.3	0.1	1	23	823	845	823	845	0.95
14	16	0.0037	0.22	12.4	0.1	1	23	851	873	851	873	0.97
15	16	4e-07	2.3e-05	24.8	0.7	1	23	879	901	879	901	0.99
16	16	0.00027	0.016	15.9	5.2	1	23	907	929	907	929	0.98

Sequence Information

Coding Sequence: ATGCACTTGCTGCAGATGCCAATTTGCAGGACATGTGATGTTAAAAAGACTCGCCAGCTCAACCTGAACGAAATTAATTCGCGTTCGGAAAAAAATGGGGAGAGAACGTTATCGGAGCTACTCGTTGAGCTGACCAGGATCGATCTCAATATGGAACACTCTAGTAAGTTGCCCCAGCATTTATGCGGCACCTGTACGCGTAAACTAAAAAACGCATACGAATTTATGCAGCAGGCACGAGAGGCAAATGAGAGACTTCTTGATTGGCTTAAGGGCATTGAACCGGAGCCTAATCATGAATCCAAGCAAACCATAAAAGAAGACTCATTTCACGAATTTATGGACGAACAGCCGGAGTTTGATTTACAAGAATCGAATGATTTAATAGCGCAGGAGGGCTCTGcaactataaaagaaaattcctCCGACAATATGTTTATTAAAATGGAGACAAACGAAATACTCAAGACGGATATTGAAAATACAAGTATAGAAAAGGATTATGCTGAATCTATTATTGTGCATTCAGATCCGTTAGTTGCGGATAATACAGAGACAGCCAAAGATTCGAATGACAACATGGAAACCGGAGACAATTCAGATCCATTGGATGATAATGTCAAATGGAATGGTTTGGGAAATGCGTCTGCATCTAGTGATGACGAAGCTGATAATATGCCACTTGTGCAATGTAAGCGTGAGCTGCAGAAGGATATCAGTTTGTCCTTGAGAACTTACGAATGCCTGCATtgtggtaaaatttttaatcgCCCGAATTCACTGAGTAAACATATACTGCGGCATCGAGACAAAAGCGAATGGCATGCCTGCACACATTGCGAGATGCGTTACTATCGCAAAGATCTGCTGCTCGCCCATATGGCAAATAAACATGGTGAAGATCTCAGGCGCAGACGTACAGTAGCGGTTTGCGATAGCAAAATGTTGAAAGACATCGATTTGAATCGCTGCAAACCGAATGGCTGTAAAATAATTCAATGCATGATCTGTCTGCGAAAGTACTCATCATTTGCCGAGTTACGCGCACATTTACAGCAACATTCAGATATTATTTCATTTGGCGAACGCCAAGAAACACATGAGGAGATTTTAGATTCTTTTTATCCGGATCTTAAGAATCTTACGGAAGAGCAACTAATAGCACTCATGCGTAAAGATCTGGAGAACCAAAGATTCTCAAATTTCTATTCCATAACCAATGAATCGGGTTATGAACTCAATCTTGATAGCTCGGAAACGGATAGCAATAATGATATGAACATTGATGATATAGATTTTGTGTCAGTGGAACAACGAATTTACGAATGTGAACTATGTAAAGTGCGATTCCGACGTAAATATAAGCTATACGAACATCAGCGAGAGCAACACAAATGGTCGGATGCACCCTTTGACTGTAAACGTTGTAAAGGTCGTTTCATTAGCATGCGTCAATTGGAACATCACGAAAGAACTCAATGCAGAAATATAAAGAAGCGATTTATCTGCAAAAAGTGTCCATTGCGATTTCGCTGGAAACACAATATGAAAGCACATACGCGTATGCATAACGATAGAtcTAAACAAGTAAATTGCAGCGAATGCAATCGTCCCTTTGAAGATCAACGTTCACTAACGATACACATGAGGAGTGTGCATGTCGACAAATCGAAACTGCTGCCGTGTCATTGGTGTAGTCGCATCTTCTATAATCGTGCATGTCTGGTCAAACATCTTAAGCGCCATGGTCTGGAAGAGAGTGATGTACCTTTGGCTGAGACTTtagtagcagcaacaaccaaACCAAATGGACTGAAGCTAATAACCTGTAAAATCTGTAATCTACAGTTTGAACAAATTTCCGATTTAAGGGTACACATTACGATGGAACAGAAGTTGAGCTTGTCATCACACCAGAGCTACGCATCGTTGTCAAACTATTCAATTACGAATGCAGCTGGGTTTGAAATGCATATTGATGATTCGGAGACTGATGTTGAGGGAAATGATGGTAATGGTTCGTACAGCTGTGATCTCTGTCAGGTGAAATGTCAACGTAAATACAAACtgtttcatcatcagcagcaattGCATACATTTGGTAAATTGCCGCACGAGTGCAACAAGTGTATTTTCAAAAGTGTTTCAAagGAAGTTTTAGAACATCACAAACGCACACAATGCTTAAACACAGAGAAACAACTAGCATGTACAATATGTGGCTACAAGTTTATGTGGCTTGAAAATCTGAATCTGCACATGCGTCTGCAGCATCCAAGAACCAGTGCAGATGAATCGAAATCCGTCAATGATGCACCTAAACCTAGAAAGAAAAAGCAAACTAATGCAACGCCACTACAGTGTCCGCATTGTGAACGCACGTATATGCAGAAAGCGCGGCTTAATATACACATAAAGGATGTGCACATCGATGGCAATCGCAAGAAAAAGGAAGCCGCACACCGTTATTTGTGCGCGTTATGTGGTCTAGAAGCTCAAACTAATTCTAAGCTAATTATACATATGCGGCGGCATACTGGAGAAAAACCCTTTGCTTGTGATTTGTGTGATATGGCGTTCACTGCACGTAATGAAATGGTCAACCACCGTAGAGTACACACAGGTGAAAGACCCTTTCGCTGCTCGATTTGTGGTAAGGACTTTCCACGCTCCGAGAAACTAAAACTGCATATGCTGACGCATAGCGGGCTCCGCCCACATAAATGTCCTTATTGCGAAATGGATTTTAGATACAAACACGATTTGAAGGGTCATTTGCGTAAGCATGGTGGTCAACCCCATACACTGCCAAATAAAGaattaaatgcttaa
Protein Sequence: MHLLQMPICRTCDVKKTRQLNLNEINSRSEKNGERTLSELLVELTRIDLNMEHSSKLPQHLCGTCTRKLKNAYEFMQQAREANERLLDWLKGIEPEPNHESKQTIKEDSFHEFMDEQPEFDLQESNDLIAQEGSATIKENSSDNMFIKMETNEILKTDIENTSIEKDYAESIIVHSDPLVADNTETAKDSNDNMETGDNSDPLDDNVKWNGLGNASASSDDEADNMPLVQCKRELQKDISLSLRTYECLHCGKIFNRPNSLSKHILRHRDKSEWHACTHCEMRYYRKDLLLAHMANKHGEDLRRRRTVAVCDSKMLKDIDLNRCKPNGCKIIQCMICLRKYSSFAELRAHLQQHSDIISFGERQETHEEILDSFYPDLKNLTEEQLIALMRKDLENQRFSNFYSITNESGYELNLDSSETDSNNDMNIDDIDFVSVEQRIYECELCKVRFRRKYKLYEHQREQHKWSDAPFDCKRCKGRFISMRQLEHHERTQCRNIKKRFICKKCPLRFRWKHNMKAHTRMHNDRSKQVNCSECNRPFEDQRSLTIHMRSVHVDKSKLLPCHWCSRIFYNRACLVKHLKRHGLEESDVPLAETLVAATTKPNGLKLITCKICNLQFEQISDLRVHITMEQKLSLSSHQSYASLSNYSITNAAGFEMHIDDSETDVEGNDGNGSYSCDLCQVKCQRKYKLFHHQQQLHTFGKLPHECNKCIFKSVSKEVLEHHKRTQCLNTEKQLACTICGYKFMWLENLNLHMRLQHPRTSADESKSVNDAPKPRKKKQTNATPLQCPHCERTYMQKARLNIHIKDVHIDGNRKKKEAAHRYLCALCGLEAQTNSKLIIHMRRHTGEKPFACDLCDMAFTARNEMVNHRRVHTGERPFRCSICGKDFPRSEKLKLHMLTHSGLRPHKCPYCEMDFRYKHDLKGHLRKHGGQPHTLPNKELNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00890305;
90% Identity: -
80% Identity: -