Basic Information

Insect: Leucophenga maculata
Gene Symbol: -
Assembly: GCA_035044805.1
Location: JAWNNP010000465.1:347469-350569[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.4e-06 8.4e-05 23.1 1.4 1 23 251 273 251 273 0.98

2 16 0.00065 0.04 14.7 3.9 1 23 280 303 280 303 0.95

3 16 0.048 3 8.8 0.2 2 23 338 359 337 359 0.96

4 16 0.00011 0.007 17.1 1.9 1 23 446 469 446 469 0.97

5 16 0.13 7.8 7.5 1.5 1 22 476 497 476 497 0.95

6 16 0.005 0.31 11.9 3.6 1 23 506 528 506 528 0.98

7 16 9.6e-06 0.00059 20.4 0.2 3 23 537 558 535 558 0.96

8 16 0.00097 0.06 14.1 3.7 2 23 566 587 565 587 0.97

9 16 0.0047 0.29 12.0 0.1 2 21 614 633 613 634 0.93

10 16 0.43 27 5.8 6.9 1 23 680 703 680 703 0.96

11 16 0.0015 0.093 13.5 0.4 2 23 741 763 740 763 0.96

12 16 0.00079 0.049 14.4 0.7 2 23 789 811 788 811 0.94

13 16 0.0078 0.48 11.3 0.1 1 23 825 847 825 847 0.95

14 16 0.0036 0.22 12.4 0.1 1 23 853 875 853 875 0.97

15 16 3.9e-07 2.4e-05 24.8 0.7 1 23 881 903 881 903 0.99

16 16 0.00026 0.016 15.9 5.2 1 23 909 931 909 931 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.4e-06	8.4e-05	23.1	1.4	1	23	251	273	251	273	0.98
2	16	0.00065	0.04	14.7	3.9	1	23	280	303	280	303	0.95
3	16	0.048	3	8.8	0.2	2	23	338	359	337	359	0.96
4	16	0.00011	0.007	17.1	1.9	1	23	446	469	446	469	0.97
5	16	0.13	7.8	7.5	1.5	1	22	476	497	476	497	0.95
6	16	0.005	0.31	11.9	3.6	1	23	506	528	506	528	0.98
7	16	9.6e-06	0.00059	20.4	0.2	3	23	537	558	535	558	0.96
8	16	0.00097	0.06	14.1	3.7	2	23	566	587	565	587	0.97
9	16	0.0047	0.29	12.0	0.1	2	21	614	633	613	634	0.93
10	16	0.43	27	5.8	6.9	1	23	680	703	680	703	0.96
11	16	0.0015	0.093	13.5	0.4	2	23	741	763	740	763	0.96
12	16	0.00079	0.049	14.4	0.7	2	23	789	811	788	811	0.94
13	16	0.0078	0.48	11.3	0.1	1	23	825	847	825	847	0.95
14	16	0.0036	0.22	12.4	0.1	1	23	853	875	853	875	0.97
15	16	3.9e-07	2.4e-05	24.8	0.7	1	23	881	903	881	903	0.99
16	16	0.00026	0.016	15.9	5.2	1	23	909	931	909	931	0.98

Sequence Information

Coding Sequence: ATGCACTTGCTGCAGTTGCAAATGCCAATTTGCAGGACTTGTGATGTTAAGAAGACTCGTCAACTCATGCTGAACGAATTCAATACGCCTGCAGGCAAAAATGGCGAGAAATTGTCGGAGCTACTCTTTGAGCTGACCAGGATTGATCTCAAAATGGGTCACTCTAGTAAGTTGCCCCAGCATTTATGCGGCACTTGTACGCGTAAACTAAAAAATGCGTACGAATATATGCAGCAAGCACGAGTGGCAAATGAGAGGCTTCTTGCATGGCTCAAGGGCAATGAGCCAGCGCCAGAACGTGaaactatacaaattataaaagaaGATTCATTTGAAGAATTCATTTCAGAAGAATCTTTAAAAGCACAGAAGGAGCCTCAAATTGTTAAAGAAATTTCCTGCgatgatatttttattaaagtggAGACAGGCGAAATACTCAAGCCGGTTATTGCAGATGATTTTACAGAATCTATTATTGTACAAGACAAATTAGTTAACGAAGTACATCAAAGTTACGCAGATCCATTAGTTGTGGATGATACATTGACAGCCAAAGATTCGGATGACAACATGGAAACCGAAGACAATTCAGATCCGTTAACtgctgatgataatgatgacgCTGACAATGCCCAACGCAATGGTTTGACAAATGCGTCGGTATCTAGTGATGAcGAAGATGATAATGTGCCACTTGTGCAATGTAAGCGTGAGCTGCAAAAGGATAATACTTTGTCCTTGAGAAAATTCGAATGCCTGCATTGTGGTAAAGTTTTTAACCGCCCTAATACGCTGAGCAAACATATACTGAGTCATCGAGACAAAAGCGAATGGCATGCCTGCACTCATTGCGAGAAGCGTTACTATCGCAAGGATCTGCTGCTGGTACATATGGCAAAAAAGCATGGTGAAGATCTCCGCCGGAAACGTACAGTAGCGGTTTGTGATAGCAAATTGTTAAAAGATATCGATTTGAACCGTTGTAAACCGAATGGttgtaaaataattcaatgCATGATCTGTTTGCGAAAGCTCTCATCTTTTGCCGAATTACGTGCACATTTACAGCAACATACAGATACTATTTCATTTGGTGAACGTAATGAAGCACATGAGGAAATCTTAGATTCTATTTATCCGGATCTTAAGAATCTAACAGAAGATCAACTAATAGCAGTCATGCGTAAAGATCTGGAGAGTCAAAGATTTTCAAATTTCTACTCAATAACCAATGAATCGGGCTATGAACTGAATCTGGATAGTTCAGAGACGGATAGTAATAATGAGCTGGACATAGATGATATAAGTTTTGTATCACTGGATCAACGCATTTACGAATGTGAGCTTTGTAATGTGCGCTTCCGTCGCAAATACAAGCTATACGAACATCAGAGAGAGCAACATAAATGGTCTGAAGCACCCTTTGACTGCAAACGTTGCAAAGGTCGTTTCGTTAGCATGCGGCAGTTGGAACATCACGAAAGAACACAATGTAGAAATATTAAGAAGCGTTTCATCTGCAAAAAGTGTCCACTGCGTTTTCGCTGGAAACATAATATGAAAGCACACACGCGCATGCATAATGATAGAtCTAGAGCAGTCAATTGCAGCGAATGCAATCGCCCCTTTGAAGATCAACGTTCACTAACAATACACATGCGTAGTGTGCATGTCGACAAATCAAAACTGATGCCATGCCATTGGTGTAGTCGCGTCTTCTACAACCGCGCGTGTCTAGTCAAACATCTAAAGCGTCACGGGCTGGAAGAGCGTGATGTACCTTTGGCTGAGACtttagtagcagcaacaaccaaACCAAATGGCCCTAAGCTAATAACCTGCAAAATCTGTAATCTACAATTCGAACAAATTTCCGATTTACGCATGCACATTACGATGGAACAAAAGCTGAGCTTGACATCGCACCAGTGCTATGAGTCTTTGTCAAACTATTCGATTACAAATGCAGCAGGTTTTGAAATGCATATTGATGATTCGGAAACTGACGGTGAGGGAAATGATGGTGGCGGTCCGTACAGTTGTGATCTCTGTCAGGTGAAATGTCAACGCAAATATAAACTGtttcatcatcagcagcaattGCATACATTCGGAAAATTACCGCACGAATGCAACAAGTGTATTTTCAAGAGTGTTTCCAagGAAGTTTTAGAGCATCACAAACGCACACAATGCTTAAACACAGAGAAACATCAGACTTGTACAATCTGTGGCTATAAGTTTATGTGGCTCGACAATCTAAATCTGCACATGCGTCTGCAGCATCCAAATTCGAGTGCCAATGAGATCATTGATGCCCCAAAACCTAgaaagaagaagcaaaataatACAACGCCACTACAGTGTCCGCACTGCGAACGCACATATATGCAGAAAGCGCGgcttaatatacatataaaagatGTGCACATCGATGGCAAtcgcaagaaaaaggaagcCGCACATCGTTATTTGTGTGCACTATGCGGTCTAGAAGCTCAAACTAATTCTAAGCTAATCATACATATGCGACGGCATACAGGCGAAAAACCTTTCGCTTGTGATTTATGCGATATGGCATTCACGGCACGCAATGAGATGGTTAACCATCGTAGAGTACATACGGGGGAACGACCATTTCGCTGTTCGATTTGTGGTAAGGATTTTCCACGCTCAGAAAAATTAAAGCTGCATATGCTAACGCACAGCGGTCTACGGCCACATAAATGTCCCTATTGCGAAATGGATTTCAGATACAAGCACGATTTGAAGGGTCATCTACGCAAGCATGGTGGTCAACCACACACACTGccaaataaagaattaaatatttaa
Protein Sequence: MHLLQLQMPICRTCDVKKTRQLMLNEFNTPAGKNGEKLSELLFELTRIDLKMGHSSKLPQHLCGTCTRKLKNAYEYMQQARVANERLLAWLKGNEPAPERETIQIIKEDSFEEFISEESLKAQKEPQIVKEISCDDIFIKVETGEILKPVIADDFTESIIVQDKLVNEVHQSYADPLVVDDTLTAKDSDDNMETEDNSDPLTADDNDDADNAQRNGLTNASVSSDDEDDNVPLVQCKRELQKDNTLSLRKFECLHCGKVFNRPNTLSKHILSHRDKSEWHACTHCEKRYYRKDLLLVHMAKKHGEDLRRKRTVAVCDSKLLKDIDLNRCKPNGCKIIQCMICLRKLSSFAELRAHLQQHTDTISFGERNEAHEEILDSIYPDLKNLTEDQLIAVMRKDLESQRFSNFYSITNESGYELNLDSSETDSNNELDIDDISFVSLDQRIYECELCNVRFRRKYKLYEHQREQHKWSEAPFDCKRCKGRFVSMRQLEHHERTQCRNIKKRFICKKCPLRFRWKHNMKAHTRMHNDRSRAVNCSECNRPFEDQRSLTIHMRSVHVDKSKLMPCHWCSRVFYNRACLVKHLKRHGLEERDVPLAETLVAATTKPNGPKLITCKICNLQFEQISDLRMHITMEQKLSLTSHQCYESLSNYSITNAAGFEMHIDDSETDGEGNDGGGPYSCDLCQVKCQRKYKLFHHQQQLHTFGKLPHECNKCIFKSVSKEVLEHHKRTQCLNTEKHQTCTICGYKFMWLDNLNLHMRLQHPNSSANEIIDAPKPRKKKQNNTTPLQCPHCERTYMQKARLNIHIKDVHIDGNRKKKEAAHRYLCALCGLEAQTNSKLIIHMRRHTGEKPFACDLCDMAFTARNEMVNHRRVHTGERPFRCSICGKDFPRSEKLKLHMLTHSGLRPHKCPYCEMDFRYKHDLKGHLRKHGGQPHTLPNKELNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00891161;
90% Identity: -
80% Identity: -