Lmon020239.1
Basic Information
- Insect
- Leucophenga montana
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_035044765.1
- Location
- JAWNNQ010002086.1:53958-60968[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1 2.2e+04 -8.7 10.5 50 50 60 60 2 232 0.60 2 3 2e-115 4.3e-111 371.3 23.2 1 299 348 649 348 650 0.92 3 3 0.092 2e+03 -2.0 4.1 216 245 675 703 653 723 0.50
Sequence Information
- Coding Sequence
- atgtcagcTAAGCGCGAAAAGAGCGCTGCCGCCAAAGAGAAggcggcggcagcggcgacTGCAGCTGAGAAGATTGTTAAGgaggaaaacaacaacaaaaagaatagCAGCAGGGTCAGCAGcagcaaagtaaacaaaacgtCAAAGTTTAAAGATACAACTGAGCCTGAATCTTCAACAGCTGCAGTCGCAGTCgcagcagcaccaccaccagcaacaacaactgcggcgacagcagcaacaacggcTTTAAGATCAAACAGCGATGAAGTCATCGAAGAATTCGATTTCAGTGATAGCGACCTGCTAGCGCTTAGCGATGATGAGACGTCGAGTGCCGCGGTAAAAAAAGGGGAAAACCAGCCCGTGCCGGTGACAGCAGAGCAGAATGCAGCGGCGACAAAGAGCAGCGACGCAATTATATCGAGTGATAACAATGATAAAGCAACGACAAGAGCCCACGTCGttcaaaatacaacaaaagcaattgaaattgaagagcCGGCAGTAAAGCAGGCGATGGAAGCGTTGGAGCATTTAGTTGAAACGCCAAAGTTGGTGGCAGAGGCGGAGACGCAGCAGAAGAAGCATGCAATCGAAGATAATAAAACCGATATAAATGTAGAATTTGCCATAATTAATGTTTCCTCAGCTGTCAGTGACAACAAAGATAACGCAGCCGAAGATGTTGGTGATACCgctggtgctgctggtgctgctgcgtTTACTGTTGTTGATGagacaaaatgcaaaaaaacaacaCCTCCAGCTACTTTGATACTCAATGATGCCGCAGATAATGCAACAGAACAAACGCCCTATTGTCCAATTACACCGCGACGTGTGGTGGACACGGCAGATGATGAGATCAATGATGATCCATTAAGTGCGGACAATTTAATCCAACAGACACCAAAACGTCGTAATACAACCACAACGACGGCTACAACAGAAGATGATGACAATGAAGAGGAGTGCTATGACGATGAACCGCCAGAAGAAGAACTACTTGTGCAATTTTTAGGCGAAGCTAATCGGATTGCCGAAGCACGTTTGGCAGCGCGACGACAAGCGCGAGCTGAAGCGCGTGAAATACGCATGCGTGAATTGGAACGACAACAGAAAGAGCAAGAACAGAATGCAGATCGTGTATTCGATATGCATAATACCACTGGTCCAGGTGGTGATGCTCTAGTGCGTACCCGCTTAACATCCGGCGTAGTGCCTGCAGTTGGTGTTGTTGGTATGCTGAATGCGACACGTGTTGTTAGTGCCAGTTCGATGTCATCGCGACGTAGCAGCGAAGATTCACTGGAGGAAGAAGGTCGAAGTCTGCGGGACATTAGACATGAACTAAAGGATGTTGAAGAGCGGTTTCGCAAAGCGATGATCGCCAATGCCCAGCTGGATAATGACCGCGCCTCACAAACGTTCGAAGTGAAACTGCTTAAGGACAAAATCGAAACAATGCAGGAATCATATGCGCAACTCGAACGTGAATTCAAAGAAAAATCGCGCGACTATAATGCACTCAAGCGTAACCTGGATAGATTAACGCTTGAGCTGAAACTGGTAGAAGGTCAACTGCATGAAAGAGATACACTTATTACGGAACAGGGTCTAGTGATTGTTGCCGTCGAGAATGCCGATGGCACAGATGCCAAGCGTGCTCTAGTCAGCGTGGAAAACGCGAATGTGCTGGCCTCAGTGCAGGGCTCATTAgATGTTCGACTTAAAAAGTTCAACGAAGAGAAACAACAGCTCGTCAGTGAAGTACAGAAACTGCAAGTTCAGCTCGAGGCCTATAAGAGCGAGGGTAAAGGACGTGGTGGCAATTCTTTAAATGGTCCCTTGGGTACTGATGAGGATTATGAGGctcaaaGAGAAGCAAACAAAATCATATCAgactacaaatataaattacaaaagGCTGAACAGGAAATCGCTAGTCTGCAAGCGAGCTTAGCACGTTCAGAAACGCAAGTTATACGCTATAAGAGCACGGCGGAAGCAGCCGAAAAAGCCGAAGCTGAATTAAAAGTTGAGCGTCGAAAACTGCAAAGAGAGAATCGCGAAGCCATGGAACGACTGGAAGAGCTGGAAACATCAAATAATCATCTGTTAAAACGTTTGGATAAATTAAAGAATGCAAAGAGCGCGTTACTGAAGGACCTCTGA
- Protein Sequence
- MSAKREKSAAAKEKAAAAATAAEKIVKEENNNKKNSSRVSSSKVNKTSKFKDTTEPESSTAAVAVAAAPPPATTTAATAATTALRSNSDEVIEEFDFSDSDLLALSDDETSSAAVKKGENQPVPVTAEQNAAATKSSDAIISSDNNDKATTRAHVVQNTTKAIEIEEPAVKQAMEALEHLVETPKLVAEAETQQKKHAIEDNKTDINVEFAIINVSSAVSDNKDNAAEDVGDTAGAAGAAAFTVVDETKCKKTTPPATLILNDAADNATEQTPYCPITPRRVVDTADDEINDDPLSADNLIQQTPKRRNTTTTTATTEDDDNEEECYDDEPPEEELLVQFLGEANRIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMHNTTGPGGDALVRTRLTSGVVPAVGVVGMLNATRVVSASSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNDRASQTFEVKLLKDKIETMQESYAQLEREFKEKSRDYNALKRNLDRLTLELKLVEGQLHERDTLITEQGLVIVAVENADGTDAKRALVSVENANVLASVQGSLDVRLKKFNEEKQQLVSEVQKLQVQLEAYKSEGKGRGGNSLNGPLGTDEDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKVERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -