Lmon004541.1
Basic Information
- Insect
- Leucophenga montana
- Gene Symbol
- sip1
- Assembly
- GCA_035044765.1
- Location
- JAWNNQ010000606.1:296112-299428[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.71 7.8e+03 -3.6 0.1 52 81 263 293 257 304 0.58 2 3 2.9e-91 3.2e-87 292.9 14.8 2 275 462 732 461 732 0.97 3 3 0.87 9.6e+03 -3.8 0.0 245 266 747 768 740 777 0.60
Sequence Information
- Coding Sequence
- atgtccGACAACGAATACGAACGTTTTGAGATAACGGATTACGATTTAGCcaatgaatttaatataaatcgCCCGCGACATAGGCAAACAAAACATCAGGCTATTTATGGCATCTGGGCCGATGACAGCGATAATGAGAGCGGCGACGAGGATGATGCCGGCGGCCGGCGTGGCAAACGACGCGGCCTTGGTGCCGGAGGCAATAAACCAAAGGATTATACAGCGCCCGTTAGTTTTGTAGCCGGCGGCATACAACAAGCtggaaaaaaagcaaaacaaactgaAGAGAAGCGAGGAGACAGCACACAGAGCGAGGATAGCGATGCGGACGATGCAACGGCGGTTGAGGATGTTGACGGTGCAGATGCGCGTCCTGCATTTGGACGCAAGCAACCGCAACTGACGATGGATGCGGATGCACAAACGTCCGATGATAGTGATGATTCCGATCGAGCTGATCGAGCGCAACACGAGTTCAACGCTAAACGCGGCGGCGGCATTAGCAGCAATTTTACGCATCATTCGCACATTACAAGCGATCGTAATGTGGGTGCCTGGGAGCAGCATACGCGCGGCATTGGCGCTAAATTACTTTTGCAGATGGGCTACAAACCGGGCAAAGGTTTGGGCAAAGATCTGCAGGGTATTTCACAGCCAGTGCAAGCGCATGTGCGCAAAGGGCGTGGCGCAATTGGTGCCTATGGACCGGAGACGGCGGCCAGTGTAGGTGGTACGGCggcacaaaaaccaaaaatgctgGATGATGATGTACGCGAAACGAAAGAATTCAAAGAGCAATTGAATAAGTGGCGTAAAACTGCTGATGCACGCgagagtagcagcagcagtgccgCCGGCGCTAAACAGTCGAAAAAGTACTATTACAAAACTGTAGAGGAAGTCCTTGAAAAGGGCAAAAAGTCGAATTATTTACTATCAGAGAAGTTGAgCAAAAAACTCGGCAATGTACCCGTCATTGATATGACCGGTCCCGAGCGACGTGTCTTAAGCGGTTATCATGCACTTGGCCAAACAAAAATCGTTGACGATGAGGAGCTTTATGAACCTGCTGCCGccggcacaacaacaacatccacTGGCGCAGCATCGGCACCTGGCAAGCGCATAACAGCAACGGCTGCAACAGTTTTTGCCATGCCGGAGCTGACGCACAATCTGCAGCTTATAGTAAACATGTGCGAACAGGATATAATTGCCATAGATAAGACGGAACGTGAGGCTGCCGATCGTCAGTCAGCGCTTGAGcatgaatataaaaatctacaagagATTATACAGTTAGAACATGCACATCTGCATACGCTTGAGGCGGCAATTGAACGCGTGGAGGAGCTGAGCGCTGGTGCTCCAAATTTAACATTGGCACGCGCTGAGCAACTATTTCTTGAGCTGCAACGTGATTATGCTGCCGAATATAAAGAATTTGGTTTGGGTGATCTGGCAGCGGGTGTTATAGCACCGCTGGTTAAGATTACGTTAGCCACTTGGCAGCCATTGGCGCAACCGACGCAACATATtgagttaattaaaaaatggcGAACACTACTCAAGCAGCATGAAACGCTTGTAGCAGCTGAAGATAAACGCAATATATTCGATCCGTATTCATCGCTTATTTGGGCCGGTGTTATACCCAGTTTTCGTGCATGTGCTGACAGCTGGAATCcgaaacaacatcaacaaatgGCTGCGCTGCTGGAAGCCTGGGCGCCGCTATTTCCTACATGGATATTGGATTCAGTGCTGGAACAGCTTATATTGCCGCGCTTAAGCATTGGTGTGCGTGATTGGGATCCATTGACAGATACGGTGCCCATACACATATGGATCTTACCTTGGAATGCTATTTTAGGTGAAAAAATGGAAGAGAGCATATATCCTGTTATACGTGAAAAATTGGGCGCTGCATTGCAAGCTTGGATGCCACAAGATAGATCAGCGCGTGCCATGTTAACACCGTGGAAGGATGCTTTTGCTGCTGTCGAATTGCAATTCTTTTTGATTCGACATATAATACCAAAGCTACAAATGGTGTTGAGCGAGTTTGTTATAAATCCGCTGCAACAGGATTTAGAACTCTGGAATCAAGTATGGGAATGGCATGAACTAATACCGCCCATGTTGATGGCTGATATGCTCGACAAATGTTTCTTTCCACGCTGGATGCAAGTGCTTGTTTTGTGGCTCAATCAATCGCCTGATTATACAGAAATCTCACGTTGGTACAGCGGCTGGAAGAGCATGTTCAGTGAGGCGTTGCTGCGTGAACCGTGCGTTAAGGAACATTTGCGACGTGCACTTGAAATGATGCATCGTGCCACAGATGCTGTGGTTAATAATACAGCCGCAACAAATACTGGCGCAGCAGTTAGCTCTGTGCCACCGCCGCCACAACCGCCGGTTTTAATTATGGATATGCAACAACTTGCAGCACCAGCACAACTCGAATTCAAGGAACTAGTCTCACAGAAATGCGCCGAATTGTGCATCATTTTTGCACCGCTGCCGGGTAGACGTGAATTTGGCAAGCAgATCTATCGCGTTGGTAAACTTTATTGTTATATCGATCGAAATGTTTGTATGATGAGCGATAGCAGCTTCAAGAACTGGCAGCCGGCCTCATTAGCACAATTATTGGAACGCGCACAAACTGGCATTGTAAACTGA
- Protein Sequence
- MSDNEYERFEITDYDLANEFNINRPRHRQTKHQAIYGIWADDSDNESGDEDDAGGRRGKRRGLGAGGNKPKDYTAPVSFVAGGIQQAGKKAKQTEEKRGDSTQSEDSDADDATAVEDVDGADARPAFGRKQPQLTMDADAQTSDDSDDSDRADRAQHEFNAKRGGGISSNFTHHSHITSDRNVGAWEQHTRGIGAKLLLQMGYKPGKGLGKDLQGISQPVQAHVRKGRGAIGAYGPETAASVGGTAAQKPKMLDDDVRETKEFKEQLNKWRKTADARESSSSSAAGAKQSKKYYYKTVEEVLEKGKKSNYLLSEKLSKKLGNVPVIDMTGPERRVLSGYHALGQTKIVDDEELYEPAAAGTTTTSTGAASAPGKRITATAATVFAMPELTHNLQLIVNMCEQDIIAIDKTEREAADRQSALEHEYKNLQEIIQLEHAHLHTLEAAIERVEELSAGAPNLTLARAEQLFLELQRDYAAEYKEFGLGDLAAGVIAPLVKITLATWQPLAQPTQHIELIKKWRTLLKQHETLVAAEDKRNIFDPYSSLIWAGVIPSFRACADSWNPKQHQQMAALLEAWAPLFPTWILDSVLEQLILPRLSIGVRDWDPLTDTVPIHIWILPWNAILGEKMEESIYPVIREKLGAALQAWMPQDRSARAMLTPWKDAFAAVELQFFLIRHIIPKLQMVLSEFVINPLQQDLELWNQVWEWHELIPPMLMADMLDKCFFPRWMQVLVLWLNQSPDYTEISRWYSGWKSMFSEALLREPCVKEHLRRALEMMHRATDAVVNNTAATNTGAAVSSVPPPPQPPVLIMDMQQLAAPAQLEFKELVSQKCAELCIIFAPLPGRREFGKQIYRVGKLYCYIDRNVCMMSDSSFKNWQPASLAQLLERAQTGIVN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01195986;
- 90% Identity
- -
- 80% Identity
- -