Basic Information

Gene Symbol
TRERF1
Assembly
GCA_035044765.1
Location
JAWNNQ010001803.1:1260817-1278854[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-09 1.2e-06 28.8 0.1 2 45 1862 1905 1861 1906 0.94

Sequence Information

Coding Sequence
ATGAAATCCAATGCTACTCTTAAGGATTATATTGATCTGGACATTAAGATTTGCACAACAGGCTTTTTTTCAGATGGCGACATTATTGAGCATTATAGCTCAGAACTGGCACAGAAGAGTATTCATCTACCTTTGACAGGATTAAGTGCGCCACGCGTACAACTTATATGCAGCGCATCTGTCGCCAACGAAAGTTTACCACCCGCCAGTCAATCTccgtcatcaacatcatcgtcgCCTTCGGTGACGCTTCATTTCAGAGATGCAAACTCCTCCTCTGATTGTTCAAATCATTCAGCAAGTGCAGCAACAGCCGTAAACTCGTCATCAATACAGTTGCCGACGTCAACACTAGAGCATGCGCTGACCATTGGCTATCCGGATCCGGAGATGTTGGCAGACGTTTTGGGCTCCATACAAACAGCTTCacttaagaacaacaacaacattacaaCAAACAATacaactacagcagcagcaacaacaactacagcggcagcaacaatagcaacaacaactgcatcaaataaaataacaatcaCGCGACGGaatacaacaaccacagcaactaatggcagcaacaacaataacaacaacattaatgCACCAAGCGGCAACAAtcgtgaaaatttaaataattcaaaaatctCCGTGCACACTGTATCCACATCTACGAGCACTAATAGCGCCGGAATCAAACCAAATACAAGCTACATTAAAAATTGTCTAATACggagcagcagctgcagcaacacAGCGACAAATGTCACGACGCTGGCACAAATaatgagcaacagcagcaacagcgcaGCCGCACTCCTTCAAGCGAACGCGAATAGCAATAGCAACTGTAGCAGCAATAGCAACTTCAGTAATTCGTCCAGCGGCAGCAACGACAGCAATCTCAGTCTGAGCAGCAACGGCAATCATAGCATACATAGTATACAGAGTCACAGTCATAGTCagaccagcagcagcagtaacagcgGAAGCGGAATCGGCGCCATAGGCGGAAGCGTTAATTTCAAGAGCAGCAATGGCAAAATTGGAGCAACCACAATTGCGGTCTCTGTCACTGGTTCGACAGCGACAGCCCTAGGCGGTCCAGTTGGTACATTAGTTGTTACAGCGAATGcatcagcgacaacaacaacaacttcaacgacagcagcagcagcaacagctgcaataatcaacacaacagcaacaacagcagcaacagcggcatcAGGAGCAAAGAAACACCGACCGAAGCTATCGTCGCCAACGCGACACGGACCGCAGCAGTGTCAGATTTGCAGCAAAATCTTTGGAAATGCCTCAGCACTGGCCAAACATAAATTGACGCACAGCGACGAACGGAAATACATTTGTGCGCTTTGCTCGAAAGCCTTCAAGCGACAAGATCACTTAAACGGACACATGATGACACACCGCAACAAGAAGCCTTACGAATGCAAGGCGGAGGGCTGTGGAAAATCGTACTGTGATGCACGCTCATTGCGTCGCCACACGGAGAATCACCATGCCGGCATAGTCATACCGCACAATCAAACACTATCGCCTACCACTGCCGCTTCGGCGAATTCCATCGTCGGCAGCCTGAGTCTATCGCCAGCCACCGCTAGCGGTGATGCTAGTTCACCGGATGGCGCTACAACATGTATTAGAACATATATCTCGACAGGCGGTTCGGTTGTGGATGCTGCTACTGGTATAGCGCTCACCGAGGAACAGATCAAAGCAATGAATCTACCCATAAAAACCGGCATAACGCTGCTATCACCGACTACGTCCACTTCGTCGACTGCATCCTCTTCGTCCGTagcgtcatcatcatcgacgAGCAACTCCGTTGCCATATCCGCAAGTTCACCGACAATCACAATTGCCGACAGTGCAACCATTGAGGGTGAGGGTTTAACACGCGAGCAACTCGATCTGATTAGCAAAATCATGCAGCAGACGAAGCAGACTAGTGCACAGGTTACCGTCTCCTCGCCTACGAGCGTCAATTCCTACAAAATTAACACGGAGTCGTCGTCACCGACATCTGCAACATTGCAAAACAGACCGCGCACTTGGAATATGCAATTGGTTAATAGCGCACAGAACGTTTCAATCACTGTCGATGATGGCACTGGCGAGGTGATTGCATCAACGGTCTCTCCAGCAGATGCTAGCAAGGATGAGGAACTCAGTCAACAGCTTGTCGCCAGCGTTAATCCACAGTTGttgaatattgtaaaaatcGATCAGAAACCGGTTGAGTGTAATCTCTGTCACCGAAAGTTCAAAAATATACCCGCCCTGAATGGGCACATGCGACTACATGGCGGCTACTTCAAGAAGGATCCAGAgacaaagaaaaacgaaaagaagGAGTCCAATGGACCACCGTTGCAGACAGCCAGCATTGGCGTGCGCGCACTGATCGAGGAGAAGATCATCAGCAAACGTAGTAAAGATTTAAACAAGGGTGCCTTCGTAGTTCCTGCACCACCCGGTAGCATAGCAACCTCCACCACTACAACCATCCGACGATCGATTAGCGATTTGGAGAGCTTTATGAATCCGAAAACGAATAGCGTGAATTTATCCCCGCATGTAGCGACGACAACCACCGCACTGCTGCCCGCCGCTACCACTATCAAGAGTGCCAGCGGACTGAGCATACAGCAGATCGGCCTACCGCAGAGCATCGAGATCTTCAGCAGCGGCGGTGGcaaacagcagcaccagcagctgCCACAGAAGACTTTACGCATCGACAACAACATCGAAGAGTACTTCGACAGTCCGAAGGACTCTACGCTGATCGAGTTATTGAAGCGCGGCACACGCATTGCTGTTACCGCCAAGAAGCCGCAGTTGTTGCCGCCTGCACCGACGAGTACAAACCAGCAGCTGCTGCAAAGCAACGTAAGCGGCATATGTAGCGAATTGCATACGTCAACACTGCCGCCAATTATGACAACGACAAGCGGCCGCCAGATCATTACCCAGAACAACCGCACTGTGATCATACCGTCCGACGTGCATGTGGTGTCCACAAAAAGTAAGACTGTCGTCGGCAACAGCAGCATAACTGCACGCAGCACATCGACGCCGGCCAGCATATCGTTGTCAGATGGCACGCCACTATCGCTAACCATAGCACCGAGCAGCGACAGCAGCGGAGCGGACACCGTCTACACTGTCACCTATTCCAGCGATACAGCAGGTCTCTTTGAAGATGCCGAGGTCTATAATGTCTCGGATACTGAGATGCTGCTGCAGACCGTGGATACTATGGAGCTGCTTAATGCAGACGGACAAATTAAGAGTGAACATTCCGAGGAGTACACGCTCGTCAGTGAGCAGACTGCTATTGATGATGCTACGACGGGAGTGACGTCCAGTCTTATTAAGGTTGAGACCGATtccaattgcaacaacaatacagccaacaacaacatcaaccacAACAACACAACCATGACAAATGCGACAACCGCTTTGCCCACTTTCCAACAGTTCCATTCCAAAGAGATTATAATGCAAAATAGCTCACAGATCCAAGCGATCACATCGATGCGCACCAACACACTCACACTGCCCGCCGATTTGAAACACCAGCTGGGCGTGTTGGCCTCACCATTGCACTCACCACTTGCGTATCCGACACCGCCGTCAAGCCATGAAAATGCAGCGCAATCTTCGCCATTCATTGAGGATGGACAGCAGTTCACCGATGTGACAAACGCCTTCTTTGGCGGCAGTGACAAATGTGGCACAACGGACTTTACAAATGTCTATTTCAAGACCAGCGACGAGGAGGATGAGGAGGCGCTAACAGACAACGAGAAAATACTAAAGTTAAAGAGCGTGCTGGAGGAAAGCGCATTCGATGCCTCCATCAAGGTGGAGGATCTGCTTAATACCAACGAAGATGATACCGAGTGTGATTTGCGTGAGTTTGCTGAGACGAATCTTTCATTTTTGGATGAAGATCAGGAGTTTCTCAATGATTCAGGAAATGCGACTTCACCGCTGTCGGAGTCCTTTTTTACGAGCGGCATAGGCACAGCAGAAGAGGTGAAAGAGGTGCTACGCGAAGTGCTACCGGAGGAGAATATGCAACTGAGCGCTGAGCAACAGGGTGAAAATATAATCGATCTATACTATCTACCCGGTTTGGGTCTACAGTCGCAAATGATGCCAAACTCAGAAGATCCGCTGCTATCCTCATCGCCACGTGAATTTGGACAGCAACGACAGCTGCCGCAATTGCAACAACAGACCGTGCATACGGAGTCCGGCGTAACAAATGCAATTTACACGCAACAAATCatacatcaacatcaacatcaacaacaacagcagcagcaacaaccacaaacgGATTTTATTGTAACTTCCATGGCAACATCGAATGTACAGAATGGAGTTGCTAATGTAATGCAATTGAATGCAGTACAAAGTCTTATGCCAGTACAAAATCAGATGCAGCAGTATATGGATGTCACCAATCAGCTCAGTggagtcaacaacaacaactcagaTATTATGccattgcaacagcaacaacagcagcagcaacaacagcagcagcaacaacaacagcagcaaaatattaatacaatcgATGCAGCCATGCTACAACCGATTATATATGCCACCTCCGCCACTGCCCAAGTCGGCAATCTAACCACCGAAAATAAACAGGATTTAAATATGGCTATACAAGCAGCAACTGGCATCGTTAACTTTTTACCCACAGAGTACAATGCAACCAGCAACAATGCTGCTAGCGCCGTTACCACCAATCAGcatttgcagcaacaacaacaacagcaacaacagcaacaacaacagcaacaacagcaacagttaTCAATGTTTGGCAGCGCTCTAACTAAATCAggcttgcagcagcagcagctaataCAACAGCCTACGGCGTTGTCGACAGCTGTATCTGTTGCCACATCCACCGTAATCTCCACCTTACAACCACTTTCCAATCAAACTAATTCAATATTAAAGCGTCGCTTACGTCCAAACGGCGGCGGCTCGAGTGACTCAAGTTTGCATAACCTCTCAAAGTTCCAAACTCTATCGCCGTATCGCTCTAAGTTGCGTAAACCCTCACGTACTCACTACACACCGGCACCCATACTCAATCCCGATCGCAAGGGCCTCGGTCTGTATAGCAATGTGCGTAGAGAGCTCGGTCAGGGCCTATTGAACGCCTTTGATGCATTCGACGATGATTTTGATGATCACATTGGATTAGTTGACTTTTCCGATGAGTCAAAGGTTAATTTAGGCTCAGCCTATCAAGCACAGCTACCGAGCTGCAAATCACTGGAAGACGATACCGTTACACTGGAGGAGAACGTCTGCGACGAGCTGATGTGGAATCCTTGCGTGCAGACTGAGGACAAGATACTCATGCGTTACATTGATCTGAGCAAATCATCTGCAGTGCCGCTAGGCAGCCACTCGGAAGAGGTTGCACTGCAGACGCTACTCAAGGCCGAAGGTAATTCGGCAGCGGCTGTGCTAACCCTGTTGCAGACAGAGTCGAGCTCATTCCAAATGAAGTGGTCCGCCTATGAGTTGGAAGTTTTTCTCAAGGGCCTGGAAAAACATGGCAAAAACTTTAGCAGTATTGCAGCTGAATTGCAGACAAAATCCACTGGCGAGTGCGTGCAGATGTATTACTTCTGGAAGAAACTTTGTGTTGACTACAAGGTCTCCCATCTGAAGGCGGAACCTGTGCATCAAACGCCGCCGGTTAGCGAACTGAAGCCATATGTCTGCGAGGTGCCCGATTGCTCGGCAAGTTTCAGCTCGAAAGCAGCGTTGCATGGACACactcgtatacatacatacggcagaaatgtcaacaacaacaacaacaacaacaacaatagcagcagcaatcaGCATGCAACAAATTccgccagcagcagcaacaacaattccaATACAACAGCAAATTACGCATGTacgcaaaatatttgtaattctattagcaacaacaacaatccaagccacagccacaacaacaacagcagcaatggcATGATCCTTAACTGCAACGGTGGCAGCAACGCCAGCATtatcagcggcagcagcaacgtCTCCGTTCAAGGTCAGAAAGATGCAACAACAAACAGGGATGGCGAATTTCCGTGCAAGGTGTGCGGCAAAGTTTTCAATAAAGTAAAAAGCCGTAGTGCGCATATGAAGACGCATCGCGTGCAGGATCcggaacagcaacagcaacaacaacaacagcagcagcaaaatcaaGTGCTAGTAATTCCAGCTCTTGCGCTGCCAATGACATCTACTCCTACATAG
Protein Sequence
MKSNATLKDYIDLDIKICTTGFFSDGDIIEHYSSELAQKSIHLPLTGLSAPRVQLICSASVANESLPPASQSPSSTSSSPSVTLHFRDANSSSDCSNHSASAATAVNSSSIQLPTSTLEHALTIGYPDPEMLADVLGSIQTASLKNNNNITTNNTTTAAATTTTAAATIATTTASNKITITRRNTTTTATNGSNNNNNNINAPSGNNRENLNNSKISVHTVSTSTSTNSAGIKPNTSYIKNCLIRSSSCSNTATNVTTLAQIMSNSSNSAAALLQANANSNSNCSSNSNFSNSSSGSNDSNLSLSSNGNHSIHSIQSHSHSQTSSSSNSGSGIGAIGGSVNFKSSNGKIGATTIAVSVTGSTATALGGPVGTLVVTANASATTTTTSTTAAAATAAIINTTATTAATAASGAKKHRPKLSSPTRHGPQQCQICSKIFGNASALAKHKLTHSDERKYICALCSKAFKRQDHLNGHMMTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHAGIVIPHNQTLSPTTAASANSIVGSLSLSPATASGDASSPDGATTCIRTYISTGGSVVDAATGIALTEEQIKAMNLPIKTGITLLSPTTSTSSTASSSSVASSSSTSNSVAISASSPTITIADSATIEGEGLTREQLDLISKIMQQTKQTSAQVTVSSPTSVNSYKINTESSSPTSATLQNRPRTWNMQLVNSAQNVSITVDDGTGEVIASTVSPADASKDEELSQQLVASVNPQLLNIVKIDQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDPETKKNEKKESNGPPLQTASIGVRALIEEKIISKRSKDLNKGAFVVPAPPGSIATSTTTTIRRSISDLESFMNPKTNSVNLSPHVATTTTALLPAATTIKSASGLSIQQIGLPQSIEIFSSGGGKQQHQQLPQKTLRIDNNIEEYFDSPKDSTLIELLKRGTRIAVTAKKPQLLPPAPTSTNQQLLQSNVSGICSELHTSTLPPIMTTTSGRQIITQNNRTVIIPSDVHVVSTKSKTVVGNSSITARSTSTPASISLSDGTPLSLTIAPSSDSSGADTVYTVTYSSDTAGLFEDAEVYNVSDTEMLLQTVDTMELLNADGQIKSEHSEEYTLVSEQTAIDDATTGVTSSLIKVETDSNCNNNTANNNINHNNTTMTNATTALPTFQQFHSKEIIMQNSSQIQAITSMRTNTLTLPADLKHQLGVLASPLHSPLAYPTPPSSHENAAQSSPFIEDGQQFTDVTNAFFGGSDKCGTTDFTNVYFKTSDEEDEEALTDNEKILKLKSVLEESAFDASIKVEDLLNTNEDDTECDLREFAETNLSFLDEDQEFLNDSGNATSPLSESFFTSGIGTAEEVKEVLREVLPEENMQLSAEQQGENIIDLYYLPGLGLQSQMMPNSEDPLLSSSPREFGQQRQLPQLQQQTVHTESGVTNAIYTQQIIHQHQHQQQQQQQQPQTDFIVTSMATSNVQNGVANVMQLNAVQSLMPVQNQMQQYMDVTNQLSGVNNNNSDIMPLQQQQQQQQQQQQQQQQQQNINTIDAAMLQPIIYATSATAQVGNLTTENKQDLNMAIQAATGIVNFLPTEYNATSNNAASAVTTNQHLQQQQQQQQQQQQQQQQQQLSMFGSALTKSGLQQQQLIQQPTALSTAVSVATSTVISTLQPLSNQTNSILKRRLRPNGGGSSDSSLHNLSKFQTLSPYRSKLRKPSRTHYTPAPILNPDRKGLGLYSNVRRELGQGLLNAFDAFDDDFDDHIGLVDFSDESKVNLGSAYQAQLPSCKSLEDDTVTLEENVCDELMWNPCVQTEDKILMRYIDLSKSSAVPLGSHSEEVALQTLLKAEGNSAAAVLTLLQTESSSFQMKWSAYELEVFLKGLEKHGKNFSSIAAELQTKSTGECVQMYYFWKKLCVDYKVSHLKAEPVHQTPPVSELKPYVCEVPDCSASFSSKAALHGHTRIHTYGRNVNNNNNNNNNSSSNQHATNSASSSNNNSNTTANYACTQNICNSISNNNNPSHSHNNNSSNGMILNCNGGSNASIISGSSNVSVQGQKDATTNRDGEFPCKVCGKVFNKVKSRSAHMKTHRVQDPEQQQQQQQQQQQNQVLVIPALALPMTSTPT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00891308;
80% Identity
iTF_00891308;