Lmon007401.2
Basic Information
- Insect
- Leucophenga montana
- Gene Symbol
- bab1
- Assembly
- GCA_035044765.1
- Location
- JAWNNQ010001104.1:1723419-1725342[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-17 2.7e-14 52.9 0.0 1 43 56 99 56 101 0.95 2 2 1.9 3.7e+03 -2.0 0.8 6 13 215 222 210 236 0.62
Sequence Information
- Coding Sequence
- ATGTTGGAAAACTCACACGCTTGGATGGGTGCTGCTTCCGGTTCCTCGCTGACagCAGATAGCTACCAGTACCAGCTGCAATCGATGTGGCAAAAATGCTGGAATACCAATCAGAATCTTATGCATCACTTACGCTTTCGAGAGCGTGGACCGCTCAAGTCGTGGCGTCCCGAAACCATGGCTGAGGCAATCTTTAGTGTACTGAAAGAGGGTTTATCACTCTCGCAAGCGGCACGTAAATACGACATACCCTATCCGACCTTTGTACTGTATGCGAATCGTGTGCATAATATGCTCGGGCCCTCCATCGATGGTGGTCCGGATTTACGTCCAAAGGGACGTGGACGTCCACAACGTATATTGCTCGGTATCTGGCCGGATGAGCACATTAAAGGTGTCATTAAGACTGTAGTCTTTCGCGATGCGAAGGATATTAAGGATGTTGATAGCATGTCGCATATGCCACCATATGGAAGACATTCGccCGTTTTCCCCTTCCAGGATATTCCCATGCCCAACTATGGCGGTCCAGGCGGCGTTGGCATTGGCAGCAATATAGGTGTCGGTGGTCCAATGGGTCCTGGTCCCTGTCCTAATGGCGTACCCACACCCTCCGGTGATCAAATGTCACAAGAGGCTACCGCTGCTGCTGTGGCAGCTGTAGCGCATATACGTCAACAAATGCAAATGGCTGCAGCGGTACAGCATCAGCATGCTACGGGCGGTGGCGATGGACCTCCGGGTCTATTTAATTTGCCACCGCATTTACAGCCACCAGGTCCTGGAAGCGGTGGTATACCGCTACCCAAGGCAAGCATTTCGCCTGCATTAAGTAGTGGTTCCTCAGGGCCGCTAGGACCGCGGCATGTGACATCGCCGTGTGGTCCCAGCGGTATACCAGGTCTACCACCAAATATATCACCCAGCATGGCAGTGGCATTAAGTCGCTGTGATCCTACAGCTTTACTgagtcaacaacaacagcatcaactGCAACAGTTGCACTTGCAGCAACAACATGCActgcatcaacagcaacagcagcagcaacataaatCTGGTTTCGGTGCAAGTTCCATGCCTCATCCGTCGTCTTCAGCAGTCCCTGCCGTTGGCGCGAGTTCGAGTAGTGTTGCCGCAcgtttgcaacagcaacagcatcatcaacatcaacatcagcaacaacaacagcagcatcagcagcatcagcaacatcaCCATCtcgaacagcagcagcagcaattacatcagcatcatcatcagcaacagcaacaacaacaacagcagcagcagcagcagcagcagcagcagcagcaaacttCTTTGTCCTCCACTACTTCGTTATCCAAAGCGCTTTCTACACCAGAACGTAGATTTAGCAGTGAAACACCGCGTCTGCATTCACCGCTCTCCGAGCTGGGACTAGAAATGAGCAGCTACAAACGCGAATACTCTCCCACTCGTCTATTTGCTGATGATCTAGCGGAACTCGTTAGCGGTGTTTCGTCTTCCTCAACGTCCGCCGTCAATGCTGCTGGTACTGTAACCAGTGGAGCACAATCTGGCACAAGTGTTGCCACCGGAAACTCCACAGCATCTTCCTCCGAAACAACAGCAGTAACACAAAGCAGCACAGCGCCCGCAATTAGCTCCAGTagtggtgctggtggtggtgttggtgttgAACCCATAACTACAAGCAGCGAATAA
- Protein Sequence
- MLENSHAWMGAASGSSLTADSYQYQLQSMWQKCWNTNQNLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKDIKDVDSMSHMPPYGRHSPVFPFQDIPMPNYGGPGGVGIGSNIGVGGPMGPGPCPNGVPTPSGDQMSQEATAAAVAAVAHIRQQMQMAAAVQHQHATGGGDGPPGLFNLPPHLQPPGPGSGGIPLPKASISPALSSGSSGPLGPRHVTSPCGPSGIPGLPPNISPSMAVALSRCDPTALLSQQQQHQLQQLHLQQQHALHQQQQQQQHKSGFGASSMPHPSSSAVPAVGASSSSVAARLQQQQHHQHQHQQQQQQHQQHQQHHHLEQQQQQLHQHHHQQQQQQQQQQQQQQQQQQQTSLSSTTSLSKALSTPERRFSSETPRLHSPLSELGLEMSSYKREYSPTRLFADDLAELVSGVSSSSTSAVNAAGTVTSGAQSGTSVATGNSTASSSETTAVTQSSTAPAISSSSGAGGGVGVEPITTSSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00890051;
- 90% Identity
- -
- 80% Identity
- -