Lmac017876.1
Basic Information
- Insect
- Leucophenga maculata
- Gene Symbol
- bab1
- Assembly
- GCA_035044805.1
- Location
- JAWNNP010003446.1:1573872-1575700[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-17 2.7e-14 52.9 0.0 1 43 56 99 56 101 0.95 2 2 2.1 4.7e+03 -2.3 0.3 3 13 212 222 210 229 0.78
Sequence Information
- Coding Sequence
- ATGTTGGAGAACTCACACGCTTGGATGGGTGCTGCTTCCGGTTCCTCATTGACAGCAGATAGCTACCAATATCAGCTGCAATCGATGTGGCAGAAATGCTGGAACACCAATCAGAATCTCATGCATCATCTACGCTTTCGCGAACGTGGTCCACTCAAATCCTGGCGTCCCGAAACCATGGCTGAGGCAATCTTTAGTGTGCTGAAAGAGGGTCTATCACTCTCACAGGCAGCACGCAAATACGATATACCCTATCCGACTTTTGTACTATATGCCAATCGTGTGCATAATATGCTCGGCCCCTCCATTGATGGTGGTCCGGACTTGCGACCAAAGGGACGTGGACGTCCACAGCGTATATTGCTTGGCATCTGGCCGGATGAGCACATTAAAGGTGTCATTAAGACTGTAGTCTTTCGCGATGCGAAGGATATTAAGGATGTTGACAGCATGTCACATTTGCCGCCATATGGCAGACACTCGCCCGTTTTTCCCTTCCAGGACATGCCCATGCCCAACTACGGTGGCCCAGGCGGCGTTGGCATGGGCAGCAGTGTTGGTGTCGGTGGTCCAATGGGTCCGGGTCACTGTCCGAATGGTGTACCCACGCCCACCGGTGATCAAATGTCACAAGAGGCTACCGCTGCCGCTGTGGCTGCGGTAGCGCATAATATACGTCAACAGATGCAAATGGCTGCAGCGGTGCAGCATCAACATGCTAGCGGCGGTGCCGACGGACCACCGGGTCTATTCAATTTGCCACCGCATTTGCAACCACCAGGTGCTGGCAGTGGTGGTATACCTTTACCTAAGGCTAGCATCTCGCCTGCATTAAGTAGTGGTTCATCTGGACCGCTTGGACCGCGACATATACCATCACCATGTGGTCCTAGCGGCATACCAGGTCTACCACCGAATATACCACCCAGTATGGCAGTGGCATTGAGTCGCTGTGATCCGACAGCTTTACTgagtcaacaacaacagcatcagctACAACAGTTGCacttacagcaacaacatgcgctgcatcaacagcagcagcagcaacagaaaaccGGTTTCGGTGCAAGTTCCATGCCTCATCCgtcgtcagcagcagcagcagcagcaagttctAGTGGTATTGCTGCACGTTTacagcatcatcaacaacaacaacaacaacaacagcaacaacaacatcaacaacaacatcagcaacaacaccaTCATCTTGAACAGTCGCAGCAgttgcaacaacatcaacaccaccagcagcagcagcagcaacagcaacaacagcagcagcagcagcaacaacagcaaacttCTTTGTCCTCCAATACTTCATCATCCAAAGCGCTTTCAACGCCAGAACGTCGTTTCGGCACCGAAACACCGCGTTTGCATTCACCGCTCTCAGAGTTGGGCCTAGAAATGAGTAGCTACAAACGCGAATACTCACCGACGCGTCTTTTTGCTGATGATCTAGCGGAACTGGTTAGCGGTGTTTCTTCTTCCTCAACGTCCGTCGGTAACGCTGCAACCAGTGGCGCACAAACAGGCACAAGTGCTGCCAACAGcaacgcagcagcaacaacctccgaaacaacagcaacacctaCAATTAGCTCCAGTAGTGGATccgctggtggtggtggtggtggtggaggcAACATCAAATTAGAACCCATAACCACAAGCAGCGAATAA
- Protein Sequence
- MLENSHAWMGAASGSSLTADSYQYQLQSMWQKCWNTNQNLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKDIKDVDSMSHLPPYGRHSPVFPFQDMPMPNYGGPGGVGMGSSVGVGGPMGPGHCPNGVPTPTGDQMSQEATAAAVAAVAHNIRQQMQMAAAVQHQHASGGADGPPGLFNLPPHLQPPGAGSGGIPLPKASISPALSSGSSGPLGPRHIPSPCGPSGIPGLPPNIPPSMAVALSRCDPTALLSQQQQHQLQQLHLQQQHALHQQQQQQQKTGFGASSMPHPSSAAAAAASSSGIAARLQHHQQQQQQQQQQQHQQQHQQQHHHLEQSQQLQQHQHHQQQQQQQQQQQQQQQQQQTSLSSNTSSSKALSTPERRFGTETPRLHSPLSELGLEMSSYKREYSPTRLFADDLAELVSGVSSSSTSVGNAATSGAQTGTSAANSNAAATTSETTATPTISSSSGSAGGGGGGGGNIKLEPITTSSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00890897;
- 90% Identity
- -
- 80% Identity
- -