Lmon006974.2
Basic Information
- Insect
- Leucophenga montana
- Gene Symbol
- -
- Assembly
- GCA_035044765.1
- Location
- JAWNNQ010001078.1:3201505-3208716[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.7e-11 5.3e-08 32.7 0.0 1 38 531 569 531 574 0.89 2 4 6.2e-14 1.2e-10 41.2 0.1 2 39 586 623 585 626 0.94 3 4 1.3e-17 2.7e-14 52.9 0.0 1 45 640 685 640 685 0.98 4 4 6.5e-19 1.3e-15 57.1 0.0 1 45 692 737 692 737 0.97
Sequence Information
- Coding Sequence
- atggaaGGTCTACTACGCACCGCCGAACAGTTGAAAATCAAAGGACTCTGTGAAACCGCCGAGAACGCTGACGATCTAAACGACGCTGCTACAGCGACAATTACTGTTTCCGAGAATATTCAGCAGACTGTAGTCGGTAATATTGTCAATACGACGATAGTACCTGGAGCTGAATCACCCAAttcacagcaacagcaacaactgcaagtacaacaacaacagcagctgcaacagCAGATTGCACAACAACAGAGTACAGTGCTGACGCAACACACCATTGGAGCAAGTAACGCGCAGCTGACAGCAGGTGGTCAATTGATTGCCACAACACCCACGTCAAGCAACAGTAGCTTACACCAgtcacaacaacagcagcagcagcagcagcaacaacaacaacagttatCACGTAAATCACGAGTACGGAAGCGTTCAAAATCACCAGATCTGCAACTGCAACAGGCACAACATCATCCACAGACCATACTTATACAGAGTCAGGATCAGACATCGATTGTTAGTTTGCAAAGTGGTAGCTACATACCCGTATCTGGAGTACAAACAGTTACGACTAGCATAGCTGGTGGCGGAGCGCATATTGCTTGTGACGACGATTCGATTGACGTTGATAAACCATCGTTGCAGAAAATCTGCAAAACTGAAACGTCAGCCGCATCGCCGGCATCGACTTCGTCAAACTCAAATAATGCCACAAGTGCAAACCCAGCAGCAAGTTTGACAGTGACAACAGCAGGGAGCAGTGGCAGCGCTATTGTAACACAAATTGTAGTAGCGCGCGAcggaaaagaaaagaatatgACTAGTTTAGGCATGGGCATGAATGGAGGCTTGCTAGGCGTGCCCATGGGATTTTTGGATTTTACACCCGAACCACCAGCACCATCAGCCACACCAGTCACCGTAACGGAACACGTCGACCTCTCTTGTAATCCCAGCACGGATACACGTGATCTATCAAatCCCACCGAAGCGCTCGATATCGACAATCACTTGGCACAGCACATGCATCGGCTCGATCAATCTCCAATGCACTCCATCGCGCATCATCAAACGGTCGACGAAAGCAACTCGAATCTCGTGCAGCACATCAAAAGCGAGATAATCGAAGCTAAGCAACTGGCACAACAGCAAGCCGCGGCGGCAGCACATCATGCTGCTGTGCAGCAGCACCACGCCGCGCAGCAACACGCACAGTTGCATGCACAGCAGCTCGTGGCGCAGGCGCAttcacagcaacaacagcaggcaCATGCGCACCAACAGCAGACACATCACCATCAACAACATCCAGAGCTGGCGACTGGCACTGTAATGGAGATTGATCCGAGCCAGATTAAACATGAACCGGGAATGATTATCACGCCCGAGATTGTCAATATGATGGGCGCTGGGCATATGGATATGTACAATTCCGATACGAGCGAGGATTCAATGATGATCGCCAACGGATCACCGCATGATCAAAATGAGCCGCATTATACGAATTTGGATCAGCAGCATGGCGGCAGCGGTgctggtggtggcggtggtggtgagATGAAAGGTCAGTTTAATGGTCCTAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAATATGAGCCTGACGAAAGCATCCACCACCTATGGTATACCGTCGACCACTCTCTGGCAACGTGCTCACCGCATGGGCATTGAAACGCCAAAGAAGGAGGGCGGCACGAAATCATGGAATGAAGATGCATTGAATAATGCCTTGGAAGCACTACGTTCTGGACAGATATCGGCGAATAAAGCGTCCAAAGCCTTTGGTATACCATCGTCAACGCTGTACAAGATTGCACGTCGCGAGGGTATACGTCTGGCAGCGCCCTTCAATGCCGCTCCAACCACGTGGACACCCGAGGATTTGGAGCGTGCATTGGAGGCAATACGCGCCGGTAATACGTCCGTGCAGAAAGCGAGTGCTGAATTTGGCATACCGACAGGAACACTCTACGGTCGCTGCAAGCGAGAAGGTATTGAGCTATCGCGCTCAAATCCAACGCCTTGGTCCGAGGAAGCAATGAATGAAGCATTAAATTCAGTGCGTGTCGGACACATGTCCATCAATCAGGCGGCGATCCATTTCAACCTGCCCTACAGTTCGCTCTATGGACGATTTAAGCGCGGAAAATACGATGTATCAAACACAAGCGGTACATCGCTAAACAACACATCAGGCAATACATCCGGCAGCATTGAAATTATCGAGCATAGTCAAGAGAATTCTTTGCATATGTTGCAACAACAGTTCCCTTACAGTCCGTCGCCGCATCAGCAACCACCGCAGCATCACAGCACGCCACAACCGTCACAGACGCCGCAACACTTGCAGCAACATGTTGTGCatctacagcaacagcaatcgCAACACCATggccagcaacagcaacatatcTCACAGCAGGATGTCGTAACTTCGAGCAGTCAAATCGTCCATGCaggacagcagcagcaacttcagCAGATCTATCAACATCACGGTACGCCCGAGAGAAGTTGA
- Protein Sequence
- MEGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQTVVGNIVNTTIVPGAESPNSQQQQQLQVQQQQQLQQQIAQQQSTVLTQHTIGASNAQLTAGGQLIATTPTSSNSSLHQSQQQQQQQQQQQQQLSRKSRVRKRSKSPDLQLQQAQHHPQTILIQSQDQTSIVSLQSGSYIPVSGVQTVTTSIAGGGAHIACDDDSIDVDKPSLQKICKTETSAASPASTSSNSNNATSANPAASLTVTTAGSSGSAIVTQIVVARDGKEKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEALDIDNHLAQHMHRLDQSPMHSIAHHQTVDESNSNLVQHIKSEIIEAKQLAQQQAAAAAHHAAVQQHHAAQQHAQLHAQQLVAQAHSQQQQQAHAHQQQTHHHQQHPELATGTVMEIDPSQIKHEPGMIITPEIVNMMGAGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGSGAGGGGGGEMKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASTTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDALNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEEAMNEALNSVRVGHMSINQAAIHFNLPYSSLYGRFKRGKYDVSNTSGTSLNNTSGNTSGSIEIIEHSQENSLHMLQQQFPYSPSPHQQPPQHHSTPQPSQTPQHLQQHVVHLQQQQSQHHGQQQQHISQQDVVTSSSQIVHAGQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00890045;
- 90% Identity
- iTF_00890045;
- 80% Identity
- -