Lmac004461.1
Basic Information
- Insect
- Leucophenga maculata
- Gene Symbol
- -
- Assembly
- GCA_035044805.1
- Location
- JAWNNP010000833.1:1993957-2000067[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.6e-11 5.9e-08 32.6 0.0 1 38 586 624 586 629 0.89 2 4 6e-14 1.4e-10 41.1 0.1 2 39 641 678 640 681 0.94 3 4 1.3e-17 2.9e-14 52.8 0.0 1 45 695 740 695 740 0.98 4 4 6.4e-19 1.4e-15 57.0 0.0 1 45 747 792 747 792 0.97
Sequence Information
- Coding Sequence
- ATGACCAACGCTGCTGTAGCCATCACCAGCAGCTACGACCACAATTCCAGCCAAGTGCGCAAAGAACGAGCGAGCAAGCATTCGACCGACCGGGGTTTATTACGCACCGCCGAACAGTTGAAAATCAAAGGACTCTGTGAAACCGCCGAGAACGCTGATGATCTAAACGACGCTGCCACAGCGAcaattactgtttccgagaatATTCAGCAAACTGTCGTCGGTAATATTGTTAATACGACGATAGTACCAGGCGCAGAATCACCCAAttcacaacaacagcaacaactacaagtacaacaacaacaacagcaacagctgcagcagcagattGCACAACAACAGAGTGCAGTGCTGACGCAACATACCATTGGAGCAAGTAACGCGCAGCTGACAGTCGGTGGTCAATTGATTGCCACAACGCCCACGTCAAGCAGCAGTAGCTTGCACcagtcacaacaacaacaacaacagcagcaacaacaacaacaacagcaacaacaacagcaacagttatCACGAAAATCACGAGTACGGAAGCGTTCAAAATCACCAGATCTGCAACTGCAACAGGCACAACATCATCCACAGACCATACTTATACAGAGTCAGGACCAAACATCGATTGTCAGTTTGCAAAGCGGTAGTTATATACCCGTATCCGGAGTACAAACAGTCACGACAAGCATAGCTGGTGGCGGCACGCATATTGCTTGTGACGACGACTCTATTGACGTTGATAAACCGTCATTGCAGAAGATCTGCAAAACTGAAACGTCAGCCGCATCGCCGGCATCGACATCGTCTAACTCAAATAATGCCACAAGTGCAAACGCAGCAGCTAGTTTGACATCAGTGACAACAACAGGGAGCAGTGGCAGCTGTGGCGCAGGAGGAGGTGGAGGAGGAGCAGCACCACCGGGCACAGCTATTGTAACACAAATTGTAGTAGCGCGCGAcggaaaagaaaagaatatgACTAGTTTAGGCATGGGCATGAATGGAGGCTTGCTAGGCGTACCCATGGGATTTTTGGATTTTACACCCGAACCACCAGCACCATCAGCCACACCAGTCACCGTAACGGAACACGTCGACCTCTCTTGTAATCCCAGCACGGATACACGTGATCTATCaaATCCCACCGAAGCGCTCGATATCGACAATCACTTGGCACAGCACATGCACCGGCTCGATCAATCTCCAATGCACTCCATCGCACATCATCAAACTGGTGACGAGAGCAACTCGAATCTCGTGCAGCACATCAAAAGTGAGATAATCGAAGCTAAGCAGTTGGCACAACAGCAGGCTGCAGCTGCAGCACATCATGCTGCTGTTCAGCAGCATCACGCCGCGCAGCAACACGCACAGCTTCATGCACAGCAGCTTGTGGCGCAGGCGCattcacagcaacaacagcaggcaCATGCGCACCAACAGCAGGTGCATCACCATCAACAGTCACAGCATTCGGAGTTGGCGACTGGCACTGTAATGGAGATTGATCCGAGCCAAATCAAACACGAACCGGGCATGATTATCACGCCCGAGATTGTCAATATGATGGGCGCTGGGCATATGGATATGTACAATTCCGATACGAGCGAGGATTCAATGATGATCGCTAACGGGTCGCCGCATGATCAAAATGAGCCGCATTATACGAATTTGGATCAGCAGCATGGCGGCAGCGGtgctggtggtggcggtggtggtgagATGAAAGGTCAGTTTAATGGTCCTAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAATATGAGCCTGACGAAAGCATCCACCACCTATGGTATACCGTCGACCACTCTCTGGCAACGTGCTCACCGCATGGGCATTGAAACGCCAAAGAAGGAGGGCGGCACGAAATCGTGGAATGAAGATGCATTGAATAATGCCTTGGAAGCACTACGTTCTGGACAGATATCGGCGAATAAAGCGTCCAAAGCCTTTGGTATACCATCGTCGACACTGTACAAGATTGCACGTCGCGAGGGTATACGTCTGGCAGCGCCCTTCAATGCCGCGCCAACCACGTGGACACCCGAGGATTTGGAGCGTGCATTGGAGGCAATACGCGCCGGTAATACGTCCGTACAGAAAGCGAGTGCTGAATTTGGCATACCCACAGGAACACTCTACGGTCGCTGCAAGCGCGAGGGTATCGAACTATCGCGCTCCAATCCAACGCCTTGGTCCGAGGAAGCAATGAATGAAGCTTTAAATTCAGTTCGTGTTGGACACATGTCCATCAACCAGGCGGCAATCCACTTCAACCTGCCCTACAGTTCGCTCTACGGACGATTTAAGCGCGGAAAATACGATGTATCAAACGCGAGCGGTACCTCGCTAAACAACACATCAGGCAATACATCCGGCAGCATTGAAATTATCGAGCATAGTCAGGAGAATTCTTTGCATATGTTGCAGCAACAGTTCCCTTACAGTCCGTCGCCGCATCAGCAGCAACCGCAGCATCACAGTACGCCACTACCGTCACAGACGCCGCAGCACTTGCAGCAACACGTAGTTcatctacagcagcagcaaacgcaaCATCATGGCCAGCAGCCGCAACATATCTCACAACAGGATGTCGTAACTTCCAGCAGTCAAATCGCCCATGccggacaacagcagcaacttcaGCAGATCTATCAACATCACGGTACGCCCGAGAGAAGTTGA
- Protein Sequence
- MTNAAVAITSSYDHNSSQVRKERASKHSTDRGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQTVVGNIVNTTIVPGAESPNSQQQQQLQVQQQQQQQLQQQIAQQQSAVLTQHTIGASNAQLTVGGQLIATTPTSSSSSLHQSQQQQQQQQQQQQQQQQQQQLSRKSRVRKRSKSPDLQLQQAQHHPQTILIQSQDQTSIVSLQSGSYIPVSGVQTVTTSIAGGGTHIACDDDSIDVDKPSLQKICKTETSAASPASTSSNSNNATSANAAASLTSVTTTGSSGSCGAGGGGGGAAPPGTAIVTQIVVARDGKEKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEALDIDNHLAQHMHRLDQSPMHSIAHHQTGDESNSNLVQHIKSEIIEAKQLAQQQAAAAAHHAAVQQHHAAQQHAQLHAQQLVAQAHSQQQQQAHAHQQQVHHHQQSQHSELATGTVMEIDPSQIKHEPGMIITPEIVNMMGAGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGSGAGGGGGGEMKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASTTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDALNNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEEAMNEALNSVRVGHMSINQAAIHFNLPYSSLYGRFKRGKYDVSNASGTSLNNTSGNTSGSIEIIEHSQENSLHMLQQQFPYSPSPHQQQPQHHSTPLPSQTPQHLQQHVVHLQQQQTQHHGQQPQHISQQDVVTSSSQIAHAGQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00890891;
- 90% Identity
- iTF_00890891;
- 80% Identity
- -