Basic Information

Insect: Leucophenga maculata
Gene Symbol: -
Assembly: GCA_035044805.1
Location: JAWNNP010003230.1:1602996-1606513[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.011 0.66 10.9 0.7 1 23 112 135 112 135 0.94

2 15 0.00019 0.012 16.4 0.4 1 23 140 163 140 163 0.94

3 15 2.5e-06 0.00016 22.3 2.8 2 23 174 196 173 196 0.96

4 15 0.62 38 5.3 0.9 2 23 322 344 322 344 0.92

5 15 1.1e-05 0.00069 20.2 3.8 1 23 353 376 353 376 0.98

6 15 0.036 2.2 9.2 9.9 2 23 543 564 543 564 0.97

7 15 8.5e-07 5.2e-05 23.8 1.5 1 23 570 593 570 593 0.96

8 15 1.1e-05 0.00069 20.2 0.4 1 23 598 621 598 621 0.96

9 15 6.6e-06 0.00041 21.0 4.1 1 23 637 659 637 659 0.97

10 15 4.2e-05 0.0026 18.4 1.6 1 23 664 686 664 686 0.98

11 15 7.4e-06 0.00046 20.8 0.4 1 23 692 714 692 714 0.96

12 15 0.00034 0.021 15.6 1.1 1 23 720 742 720 742 0.98

13 15 1.8e-06 0.00011 22.7 1.7 3 23 750 770 749 770 0.99

14 15 5.3e-08 3.3e-06 27.6 1.0 1 23 776 798 776 798 0.99

15 15 0.079 4.9 8.1 2.2 1 23 803 826 803 826 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.011	0.66	10.9	0.7	1	23	112	135	112	135	0.94
2	15	0.00019	0.012	16.4	0.4	1	23	140	163	140	163	0.94
3	15	2.5e-06	0.00016	22.3	2.8	2	23	174	196	173	196	0.96
4	15	0.62	38	5.3	0.9	2	23	322	344	322	344	0.92
5	15	1.1e-05	0.00069	20.2	3.8	1	23	353	376	353	376	0.98
6	15	0.036	2.2	9.2	9.9	2	23	543	564	543	564	0.97
7	15	8.5e-07	5.2e-05	23.8	1.5	1	23	570	593	570	593	0.96
8	15	1.1e-05	0.00069	20.2	0.4	1	23	598	621	598	621	0.96
9	15	6.6e-06	0.00041	21.0	4.1	1	23	637	659	637	659	0.97
10	15	4.2e-05	0.0026	18.4	1.6	1	23	664	686	664	686	0.98
11	15	7.4e-06	0.00046	20.8	0.4	1	23	692	714	692	714	0.96
12	15	0.00034	0.021	15.6	1.1	1	23	720	742	720	742	0.98
13	15	1.8e-06	0.00011	22.7	1.7	3	23	750	770	749	770	0.99
14	15	5.3e-08	3.3e-06	27.6	1.0	1	23	776	798	776	798	0.99
15	15	0.079	4.9	8.1	2.2	1	23	803	826	803	826	0.94

Sequence Information

Coding Sequence: ATGTCGCCATCAAAACTTGATGCGGAACGCATCTGTCGTATTTGCTTGCGCGAACAGAATGAACTCTTCCTCATTTACGATGAGACACCCGTAGAACAGGGCTTAAATATTGTAcagattttaaatgaatgtacACGATATACAGTGGAGCGCTACGATAAAATGCCGCACCAGATATGTGCCGGCTGTATTGCTGAGGCGCGTGCTGCATATCGCTTTAAGCGCACTGCCGATGAAGCGTACCGTACACTTGTCTCTTTGCTTGGGCGTATTCCGCGCAAAAACAAGGAGAACCATGTCGATAATGGCACGCAGACCGAGCAAAGCTCGTTGCATCCGTGTGAAATGTGCAATGAAAAACTGTTTAGCGCAAGTGAATTGCGCCAGCATCGCACCATAGAGCATAATCAGCGTGAATTTAAGTGCAAGGTGTGCGATAAGGTGTTCGATCAGCTGCGTGTATTACAAATACATCTGACACAGGCGCATAATGAACAAATATCTGCGTCAGCCTCGCTACGGTGCAGAGAATGTCAACGTGTGTTCTCGCGGCGTGATCACCTGGTGCGTCATATGCGCAATCTTCACGGACAGCAACCTACGACATCGTCGGCTGCAACTCAGGAGAAACTGTCGGAAAATGCTGTGAAACATGAAGATATGGTTTATTTGCATACAGAGAAGACTGATAATGATTCGCTCTTGGAACAAACCGAAATGATTAGTTTTGAGCCATGTTGGGCACATAAATTTGAGTCTGTCGATGCTGAGGATGCCATTGACGAAACCAATTTGCAAACAAATCCAATATCCAGCGACGATGATTCAAATCAAGCGGACAATGATGTCAAACAAAAGTTATGGCTAGCACTGGAGCCTGAAGTGTATTTGGATCTGGATGCACGTAATACACAACACAATTTAGAAAGTCACAATACACCGATGCCGACAAGGGTCGACCGAACGTGCGTACTTTGTAATGAGCTATTCCAAAGCTACAAAGAACTATGCACGCATCTTATTGAAGTGCATAAGCATGACGGATTGTTGTCCAAGTTTCGTTGCAATATATGCCAGCGACAGTTCAGACGTGATTATCATTTGCAGCGACACATAAGTACCGTACACAAATGTCTGATTGAAGTTAATGAGAGCATGGAACCATCGGAAAAAAGAAGGAAATTGTTGAAATCGAAGTCGGATGATGAGAGCAATGAAAACAACGAAGCGCTTGAGTCTGTTTATGACGATGCACATAGCGTAGTGAGAGATGAGGCTTCCGACGATGATGATCCTGAGAATGATGTCTTGGAAAACGCTGCCTTTAAAGATAAGAACGTTGGCCATACTGTACATATTAAAACGGAACCTTTGGTGACTGAAACTACATTAACTAGTGAATTGGATTCCACATTTGTCTCACTGAAACACGAATTGCCTGAGGACTTAAACGATGCAGCTTTTCCAGCTGCAGCAGAAACAGGTGATGAAGATGAATTGATTTCGTATCAAACAGTTAAAACATCGCCTGGAAAACGTAGCAAAGTCAAAGTTGAAATAGTGAGAGAGTATCTGCAAAAGAAGCGAACGCCGCGGAAGCATAACACCGAAGACAATCCTGAAAACCGTTGTGACCAGTGTCAACGTACTTTCTCACGCCACTGTCATCTTTTGCGGCATAAACTTTCGCATTTGGAGCAAAAGCCTCATGAGTGTCCGAATTGTCCGAAAACATTTGCACGCAGCGATCATCTAAAAGCACATGTTCAAAGTTTGCACGGTAATAAGGACTACAAATGTTCATTATGTGATGCAGCATTCTCGCGTTCAGACGCACTAGAACGACACAGACTAAACAAACACGATGGTGCTGGTCTCGATGGCGTTATTGGCGTCGAAACAAAAGTGCATCCTTGCGAGTACTGCGAGAAGAAATTCACAAGTAAAAGCTATTTACGTAAGCACACACTCATGCACACGGATCTGTTGTATGCGTGTAAAACCTGCGATGAAACATTCAAGGAACGGTCAAAGCTGCGTGAGCACGAGAAAACGCACGTATCAGAACGTAACTTTTTGTGCAGTATTTGCGGCGATAGCTTTGCACGTAATGATTACTTGCGCGTGCACATGCGTAGACATCTTGGGGAGAAACCGTACAAGTGCAAATTTTGCAGCAAAGGATTTCCTCGTGCCACTGACGTCAAAGTGCATGAACGCTACCACACCGGAACTAAACCAAATCTATGCACGTTATGCGGCAAGGGCTTTCATCGAGCCTACAATCTAACCATTCATATGCGTACACACACCGGCGAACGTCCGTATCGCTGTGATCAGTGCCCGAAAAGTTTTACACAAAGCAACGATCTTAAAGCGCACATTCGACGTCATACTGGCGAACGTTACAAATGTAGCGAATGTGACGCCTGCTTTTTACAACTTTACGCTATGCGCCACCATGCACTCAGTGTGCACGGTAAACACATTGAATCGAAGACAGGACGTCTGCAACGCACCGGCCTTTACGATGATCCAAATACTCAGCCGCAGATTATCACAACCTTGGTAGCGCCATCGACGAGGTATGCAGTACGTGAAACTGCAACCTCAACACAACAACAGGATTTATCAGCATCATTAAtggtacagcaacaacaagaagcatCAAAAGCTCCGACTGTGATTCATACACAACAACCACAGGACTCGCCGTATGCCacttcaataataaatgttgCCGAGCAGTCGCCAGCCATCGCAGTGACTTCTGCTGCAGCATCGATAACGGGAAATGACTATCTTACATCAGCCTACATAACACTACCGGATAATATTGGTGAGTTGATTATATTTATCACGGGCTTGTATCTAGTCATCACTCTTGTGGTAGATCGATTTACTTCCCTATTAGATTAG
Protein Sequence: MSPSKLDAERICRICLREQNELFLIYDETPVEQGLNIVQILNECTRYTVERYDKMPHQICAGCIAEARAAYRFKRTADEAYRTLVSLLGRIPRKNKENHVDNGTQTEQSSLHPCEMCNEKLFSASELRQHRTIEHNQREFKCKVCDKVFDQLRVLQIHLTQAHNEQISASASLRCRECQRVFSRRDHLVRHMRNLHGQQPTTSSAATQEKLSENAVKHEDMVYLHTEKTDNDSLLEQTEMISFEPCWAHKFESVDAEDAIDETNLQTNPISSDDDSNQADNDVKQKLWLALEPEVYLDLDARNTQHNLESHNTPMPTRVDRTCVLCNELFQSYKELCTHLIEVHKHDGLLSKFRCNICQRQFRRDYHLQRHISTVHKCLIEVNESMEPSEKRRKLLKSKSDDESNENNEALESVYDDAHSVVRDEASDDDDPENDVLENAAFKDKNVGHTVHIKTEPLVTETTLTSELDSTFVSLKHELPEDLNDAAFPAAAETGDEDELISYQTVKTSPGKRSKVKVEIVREYLQKKRTPRKHNTEDNPENRCDQCQRTFSRHCHLLRHKLSHLEQKPHECPNCPKTFARSDHLKAHVQSLHGNKDYKCSLCDAAFSRSDALERHRLNKHDGAGLDGVIGVETKVHPCEYCEKKFTSKSYLRKHTLMHTDLLYACKTCDETFKERSKLREHEKTHVSERNFLCSICGDSFARNDYLRVHMRRHLGEKPYKCKFCSKGFPRATDVKVHERYHTGTKPNLCTLCGKGFHRAYNLTIHMRTHTGERPYRCDQCPKSFTQSNDLKAHIRRHTGERYKCSECDACFLQLYAMRHHALSVHGKHIESKTGRLQRTGLYDDPNTQPQIITTLVAPSTRYAVRETATSTQQQDLSASLMVQQQQEASKAPTVIHTQQPQDSPYATSIINVAEQSPAIAVTSAAASITGNDYLTSAYITLPDNIGELIIFITGLYLVITLVVDRFTSLLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00891156;
90% Identity: -
80% Identity: -