Lmac019633.1
Basic Information
- Insect
- Leucophenga maculata
- Gene Symbol
- lrrfip2
- Assembly
- GCA_035044805.1
- Location
- JAWNNP010003459.1:300459-307566[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.098 2.2e+03 -2.1 8.4 22 89 20 98 1 109 0.44 2 4 0.013 3e+02 0.8 6.0 45 115 136 206 97 213 0.69 3 4 2.3e-115 5.2e-111 371.0 23.4 1 299 316 617 316 618 0.91 4 4 0.087 2e+03 -1.9 4.1 216 245 643 671 621 691 0.50
Sequence Information
- Coding Sequence
- atgtcggCTAAGCGCGAGAAGAGCGCAGCAGCCAaggagaaggctgcggcggcaGCAACAGCTGAGAAGAGTGCTAAggaagaaaacaacaacacaaaaaagcagaacaacaaagtaaacaaaacGTCAAAGATTAAAGAGACAACTGAGCCTGAATCTTCACCAGCTGCAGTCgcagcaacagccacaacaacaacaacagcaacaccaacagtCATAGCAGCAGCGGCGACTTTAACATCAAACAGCGATGAAGTCATCGAAGAATTCGATTTCAGTGATAGCGACCTGCGAGAGCTTAACGACGATGAGACAGAAGGGGAAAACCTGCCCATGCCGGTAACAGCGGAGCAAAATGCAAGCGAAACAGAGTTAGGAGTAGCGGCGAAAAAGAGCAGCGACGACGCAATTGTAGCGAATGATAACAATGATAATAaagcagcagcgacaacagcACACGTCgatcaaaatacaacaaaagtaaTTGCAGACCAGCAGGAAGCGGTGGAGCAGACAGCGACGAAGAATCACACAATCGAAGATAATAAAGCCGATATAAATGAAGAATTTGCCATAATTAATGTTTCCTCAGCTGTcggcgacaacaacaaaaacgcagtcgaagttgttgctgctgatgaatTGCAACGCAAAAAAGCAACACCTCCCGCAAATTTGATAATCAACGATCCAGCAGACCAAGCGCCAAACAAACAGTTACCCTATTGTCCGATTACACCGCGACGTGTTGTGGACACGGCAGATGATGAGCTCCATGATGATCCATTAAGCGTTGAGAACATAGGTCAACAACAGACACCAAGACGGCGTAATACAACCACAACAGCGACCACGGAAGATGACGAGCATGATGAGGACTACTATGATGATGAGCCGCCGGAAGAGGAACTGCTTGTGCAATTTTTAGGCGAAGCCAATCGGATTGCCGAAGCACGTTTAGCGGCGCGGCGACAAGCGCGTGCCGAAGCGCGTGAAATACGCATGCGCGAATTGGAACGGCAACAGAAGGAGCAAGAACAGAATGCAGATCGTGTATTCGATATGCATAATACCACAGGACCAGGTGGTGATGCGCTAGCGCGAACCCGCTTAACATCCGGCGTAGTGCCTGTAGCTGGCGTTGTTGGTCTATTGAATACCACACGTGTTGTTAGTGCCAGTTCGATGTCATCGCGACGTAGCAGCGAAGATTCACTGGAGGAAGAAGGTCGAAGTCTGCGGGATATTAGACATGAACTAAAggaTGTTGAAGAGCGGTTTCGCAAAGCGATGATCGCCAATGCCCAGCTGGATAATGACCGCGCCTCACAAACGTTCGAAGTGAAACTGCTTAAGGACAAAATCGAAACAATGCAGGAATCATATGCGCAACTCGAACGTGAATTTAAAGAGAAATCGCGCGACTATAATGCGCTCAAGCGTAATCTGGACAGATTAACGCTTGAGTTGAAACTGGTAGAAGGTCAACTGCACGAAAGAGATACACTCATAACGGAACAGGGTCTAGTGATTGTTGCCGTCGAGAATGCCGATGGCACAGATGCCAAGCGTGCTCTAGTCAGCGTAGAAAACGCGAATGTGCTGGCCTCAGTGCAGGGTTCATTAGATGTGCGACTTAAAAAGTTCAACGAAGAGAAACAACAACTTGTCAATGAAGTGCAGAAACTGCAAGTTCAGCTCGAGGCCTATAAGAGCGAGGGTAAAGGACGTGGTGGCAATTCTTTAAATGGTCCCTTGGGTTCTGATGAGGATTATGAGGCTCaaaGAGAAGCAAACAAAATCATATCAGactacaaatataaattacaaaagGCTGAACAGGAAATCGCTAGTCTGCAGGCGAGCTTAGCACGTTCAGAAACGCAAGTTATACGCTATAAGAGCACAGCAGAAGCGGCTGAAAAGGCGGAAGCTGAATTAAAAGTCGAACGTCGGAAACTGCAAAGAGAGaATCGCGAAGCCATGGAACGCCTAGAAGAGTTGGAAACATCAAATAATCACCTGTTAAAACGTTTGGATAAATTAAAGAATGCAAAGAGCGCGTTACTGAAGGATCTCTGA
- Protein Sequence
- MSAKREKSAAAKEKAAAAATAEKSAKEENNNTKKQNNKVNKTSKIKETTEPESSPAAVAATATTTTTATPTVIAAAATLTSNSDEVIEEFDFSDSDLRELNDDETEGENLPMPVTAEQNASETELGVAAKKSSDDAIVANDNNDNKAAATTAHVDQNTTKVIADQQEAVEQTATKNHTIEDNKADINEEFAIINVSSAVGDNNKNAVEVVAADELQRKKATPPANLIINDPADQAPNKQLPYCPITPRRVVDTADDELHDDPLSVENIGQQQTPRRRNTTTTATTEDDEHDEDYYDDEPPEEELLVQFLGEANRIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMHNTTGPGGDALARTRLTSGVVPVAGVVGLLNTTRVVSASSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNDRASQTFEVKLLKDKIETMQESYAQLEREFKEKSRDYNALKRNLDRLTLELKLVEGQLHERDTLITEQGLVIVAVENADGTDAKRALVSVENANVLASVQGSLDVRLKKFNEEKQQLVNEVQKLQVQLEAYKSEGKGRGGNSLNGPLGSDEDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKVERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -